RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 EP400Q96L91 3159 aa21.66■■□□□ 1.06
SNX6-205ENST00000555648 EZH2Q15910 746 aaKnown RBP21.65■■□□□ 1.06
SNX6-205ENST00000555648 PCGF6Q9BYE7 350 aa21.65■■□□□ 1.06
SNX6-205ENST00000555648 USP31Q70CQ4 1352 aa21.64■■□□□ 1.06
SNX6-205ENST00000555648 NINLQ9Y2I6 1382 aa21.64■■□□□ 1.06
SNX6-205ENST00000555648 PSDA5PKW4 1024 aaPredicted RBP21.64■■□□□ 1.05
SNX6-205ENST00000555648 DISP2A7MBM2 1401 aa21.63■■□□□ 1.05
SNX6-205ENST00000555648 EDC4Q6P2E9 1401 aaKnown RBP21.63■■□□□ 1.05
SNX6-205ENST00000555648 TMF1P82094 1093 aa21.63■■□□□ 1.05
SNX6-205ENST00000555648 TESK2Q96S53 571 aa21.63■■□□□ 1.05
SNX6-205ENST00000555648 CARD10Q9BWT7 1032 aa21.63■■□□□ 1.05
SNX6-205ENST00000555648 AKAP12Q02952 1782 aa21.63■■□□□ 1.05
SNX6-205ENST00000555648 RGPD1P0DJD0 1748 aa21.63■■□□□ 1.05
SNX6-205ENST00000555648 A0A1W2PP64 1363 aa21.61■■□□□ 1.05
SNX6-205ENST00000555648 PARD3Q8TEW0 1356 aa21.61■■□□□ 1.05
SNX6-205ENST00000555648 CD163L1Q9NR16 1453 aa21.6■■□□□ 1.05
SNX6-205ENST00000555648 CAMKK2Q96RR4 588 aa21.6■■□□□ 1.05
SNX6-205ENST00000555648 OVOS2A0A0G2JMS6 1433 aa21.6■■□□□ 1.05
SNX6-205ENST00000555648 OVOS2A0A0J9YW53 1432 aa21.6■■□□□ 1.05
SNX6-205ENST00000555648 OVOS2Q6IE36 1432 aa21.6■■□□□ 1.05
SNX6-205ENST00000555648 USP47Q96K76 1375 aa21.6■■□□□ 1.05
SNX6-205ENST00000555648 R3HDM1Q15032 1099 aaKnown RBP21.59■■□□□ 1.05
SNX6-205ENST00000555648 CDCA8Q53HL2 280 aa21.59■■□□□ 1.05
SNX6-205ENST00000555648 NLRP2Q9NX02 1062 aa21.59■■□□□ 1.05
SNX6-205ENST00000555648 TIMELESSQ9UNS1 1208 aa21.59■■□□□ 1.05
SNX6-205ENST00000555648 CCDC7Q96M83 1385 aa21.59■■□□□ 1.05
SNX6-205ENST00000555648 EXOC5O00471 708 aa21.58■■□□□ 1.05
SNX6-205ENST00000555648 NBPF14Q5TI25 921 aa21.58■■□□□ 1.05
SNX6-205ENST00000555648 COG3Q96JB2 828 aa21.58■■□□□ 1.05
SNX6-205ENST00000555648 NFAT5O94916 1531 aa21.57■■□□□ 1.04
SNX6-205ENST00000555648 CLSPNQ9HAW4 1339 aa21.56■■□□□ 1.04
SNX6-205ENST00000555648 MON2Q7Z3U7 1717 aa21.56■■□□□ 1.04
SNX6-205ENST00000555648 ANKRD24Q8TF21 1146 aa21.54■■□□□ 1.04
SNX6-205ENST00000555648 ABCC6O95255 1503 aa21.54■■□□□ 1.04
SNX6-205ENST00000555648 ERBB3P21860 1342 aa21.54■■□□□ 1.04
SNX6-205ENST00000555648 COL18A1P39060 1754 aa21.53■■□□□ 1.04
SNX6-205ENST00000555648 PARP4Q9UKK3 1724 aaKnown RBP21.53■■□□□ 1.04
SNX6-205ENST00000555648 ANKRD36BQ8N2N9 1353 aa21.52■■□□□ 1.04
SNX6-205ENST00000555648 MARCH10Q8NA82 808 aaPredicted RBP21.52■■□□□ 1.04
SNX6-205ENST00000555648 BCL11BQ9C0K0 894 aaPredicted RBP21.52■■□□□ 1.04
SNX6-205ENST00000555648 AMPHP49418 695 aa21.51■■□□□ 1.03
SNX6-205ENST00000555648 TNS1Q9HBL0 1735 aaKnown RBP21.51■■□□□ 1.03
SNX6-205ENST00000555648 IL2RBP14784 551 aa21.5■■□□□ 1.03
SNX6-205ENST00000555648 IP6K1Q92551 441 aa21.5■■□□□ 1.03
SNX6-205ENST00000555648 LTV1Q96GA3 475 aaPredicted RBP21.5■■□□□ 1.03
SNX6-205ENST00000555648 PLSCR1O15162 318 aa21.48■■□□□ 1.03
SNX6-205ENST00000555648 LRRC37A3O60309 1634 aa21.47■■□□□ 1.03
SNX6-205ENST00000555648 CCER1Q8TC90 406 aaPredicted RBP21.47■■□□□ 1.03
SNX6-205ENST00000555648 GGNBP2Q9H3C7 697 aa21.45■■□□□ 1.02
SNX6-205ENST00000555648 MAP3K19Q56UN5 1328 aa21.45■■□□□ 1.02
SNX6-205ENST00000555648 BCL9O00512 1426 aa21.45■■□□□ 1.02
SNX6-205ENST00000555648 TNS2Q63HR2 1409 aa21.45■■□□□ 1.02
SNX6-205ENST00000555648 USP54Q70EL1 1684 aa21.44■■□□□ 1.02
SNX6-205ENST00000555648 FYB1O15117 783 aa21.43■■□□□ 1.02
SNX6-205ENST00000555648 HOXC9P31274 260 aa21.43■■□□□ 1.02
SNX6-205ENST00000555648 RGPD5Q99666 1765 aa21.42■■□□□ 1.02
SNX6-205ENST00000555648 POLR3GLQ9BT43 218 aa21.42■■□□□ 1.02
SNX6-205ENST00000555648 FBLN1P23142 703 aa21.41■■□□□ 1.02
SNX6-205ENST00000555648 PTF1AQ7RTS3 328 aa21.41■■□□□ 1.02
SNX6-205ENST00000555648 ACSBG1Q96GR2 724 aa21.41■■□□□ 1.02
SNX6-205ENST00000555648 RRS1Q15050 365 aaKnown RBP21.4■■□□□ 1.02
SNX6-205ENST00000555648 PEAK1Q9H792 1746 aa21.4■■□□□ 1.02
SNX6-205ENST00000555648 LRP5O75197 1615 aa21.4■■□□□ 1.02
SNX6-205ENST00000555648 DDX54Q8TDD1 881 aaKnown RBP21.39■■□□□ 1.01
SNX6-205ENST00000555648 LTN1O94822 1766 aa21.38■■□□□ 1.01
SNX6-205ENST00000555648 RTL1A6NKG5 1358 aa21.37■■□□□ 1.01
SNX6-205ENST00000555648 KCNQ2O43526 872 aa21.37■■□□□ 1.01
SNX6-205ENST00000555648 TXNRD1Q16881 649 aa21.37■■□□□ 1.01
SNX6-205ENST00000555648 SMG6Q86US8 1419 aaKnown RBP21.37■■□□□ 1.01
SNX6-205ENST00000555648 WNK3Q9BYP7 1800 aa21.36■■□□□ 1.01
SNX6-205ENST00000555648 EIF4G2P78344 907 aaKnown RBP eCLIP21.36■■□□□ 1.01
SNX6-205ENST00000555648 SPON1Q9HCB6 807 aa21.36■■□□□ 1.01
SNX6-205ENST00000555648 STK32BQ9NY57 414 aa21.36■■□□□ 1.01
SNX6-205ENST00000555648 PPP1R1BQ9UD71 204 aaPredicted RBP21.36■■□□□ 1.01
SNX6-205ENST00000555648 RREB1Q92766 1687 aa21.34■■□□□ 1.01
SNX6-205ENST00000555648 NSD3Q9BZ95 1437 aa21.34■■□□□ 1.01
SNX6-205ENST00000555648 PROM2Q8N271 834 aa21.33■■□□□ 1.01
SNX6-205ENST00000555648 NUP188Q5SRE5 1749 aa21.32■■□□□ 1
SNX6-205ENST00000555648 ZCRB1Q8TBF4 217 aaKnown RBP21.32■■□□□ 1
SNX6-205ENST00000555648 RAPGEF4Q8WZA2 1011 aa21.32■■□□□ 1
SNX6-205ENST00000555648 CARD14Q9BXL6 1004 aa21.32■■□□□ 1
SNX6-205ENST00000555648 ANO8Q9HCE9 1232 aaPredicted RBP21.32■■□□□ 1
SNX6-205ENST00000555648 CGNL1Q0VF96 1302 aa21.31■■□□□ 1
SNX6-205ENST00000555648 SYTL4Q96C24 671 aaPredicted RBP21.31■■□□□ 1
SNX6-205ENST00000555648 PPM1GO15355 546 aaPredicted RBP21.3■■□□□ 1
SNX6-205ENST00000555648 FLT4P35916 1363 aa21.3■■□□□ 1
SNX6-205ENST00000555648 SRCAPQ6ZRS2 3230 aa21.3■■□□□ 1
SNX6-205ENST00000555648 TATP17735 454 aaPredicted RBP21.29■■□□□ 1
SNX6-205ENST00000555648 HSP90AB2PQ58FF8 381 aa21.29■■□□□ 1
SNX6-205ENST00000555648 NBPF6Q5VWK0 638 aa21.29■■□□□ 1
SNX6-205ENST00000555648 USHBP1Q8N6Y0 703 aa21.29■■□□□ 1
SNX6-205ENST00000555648 NBPF4Q96M43 638 aa21.29■■□□□ 1
SNX6-205ENST00000555648 INSRP06213 1382 aa21.28■■□□□ 1
SNX6-205ENST00000555648 KIF24Q5T7B8 1368 aa21.28■■□□□ 1
SNX6-205ENST00000555648 SBF2Q86WG5 1849 aa21.28■■□□□ 1
SNX6-205ENST00000555648 HSPA5P11021 654 aaKnown RBP21.28■■□□□ 1
SNX6-205ENST00000555648 RGPD3A6NKT7 1758 aaPredicted RBP21.28■■□□□ 1
SNX6-205ENST00000555648 RGPD4Q7Z3J3 1758 aa21.28■■□□□ 1
SNX6-205ENST00000555648 SLC15A2Q16348 729 aa21.27■■□□□ 1
SNX6-205ENST00000555648 FAM208AQ9UK61 1670 aaKnown RBP21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms