RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 A0A1W2PP64 1363 aa34.34■■■■□ 3.09
PRKCH-216ENST00000555542 EDC4Q6P2E9 1401 aaKnown RBP34.33■■■■□ 3.09
PRKCH-216ENST00000555542 TIMELESSQ9UNS1 1208 aa34.32■■■■□ 3.08
PRKCH-216ENST00000555542 NINLQ9Y2I6 1382 aa34.32■■■■□ 3.08
PRKCH-216ENST00000555542 NFAT5O94916 1531 aa34.31■■■■□ 3.08
PRKCH-216ENST00000555542 CSB-PGBD3P0DP91 1061 aa34.3■■■■□ 3.08
PRKCH-216ENST00000555542 FAM196AQ6ZSG2 479 aa34.3■■■■□ 3.08
PRKCH-216ENST00000555542 AXIN2Q9Y2T1 843 aa34.3■■■■□ 3.08
PRKCH-216ENST00000555542 USP31Q70CQ4 1352 aa34.3■■■■□ 3.08
PRKCH-216ENST00000555542 RGPD5Q99666 1765 aa34.3■■■■□ 3.08
PRKCH-216ENST00000555542 TMF1P82094 1093 aa34.29■■■■□ 3.08
PRKCH-216ENST00000555542 USP54Q70EL1 1684 aa34.28■■■■□ 3.08
PRKCH-216ENST00000555542 WDR17Q8IZU2 1322 aa34.28■■■■□ 3.08
PRKCH-216ENST00000555542 PARP4Q9UKK3 1724 aaKnown RBP34.26■■■■□ 3.07
PRKCH-216ENST00000555542 TRIM37O94972 964 aa34.23■■■■□ 3.07
PRKCH-216ENST00000555542 CCER1Q8TC90 406 aaPredicted RBP34.23■■■■□ 3.07
PRKCH-216ENST00000555542 TNS1Q9HBL0 1735 aaKnown RBP34.23■■■■□ 3.07
PRKCH-216ENST00000555542 LTN1O94822 1766 aa34.22■■■■□ 3.07
PRKCH-216ENST00000555542 ABCC6O95255 1503 aa34.22■■■■□ 3.07
PRKCH-216ENST00000555542 EN1Q05925 392 aaPredicted RBP34.21■■■■□ 3.07
PRKCH-216ENST00000555542 WNK3Q9BYP7 1800 aa34.19■■■■□ 3.06
PRKCH-216ENST00000555542 CDCA8Q53HL2 280 aa34.19■■■■□ 3.06
PRKCH-216ENST00000555542 DDB1Q16531 1140 aa34.18■■■■□ 3.06
PRKCH-216ENST00000555542 LRRC37A3O60309 1634 aa34.18■■■■□ 3.06
PRKCH-216ENST00000555542 ANKRD36BQ8N2N9 1353 aa34.17■■■■□ 3.06
PRKCH-216ENST00000555542 OVOS2A0A0J9YW53 1432 aa34.16■■■■□ 3.06
PRKCH-216ENST00000555542 OVOS2Q6IE36 1432 aa34.16■■■■□ 3.06
PRKCH-216ENST00000555542 CARD10Q9BWT7 1032 aa34.16■■■■□ 3.06
PRKCH-216ENST00000555542 CDCA7Q9BWT1 371 aaPredicted RBP34.15■■■■□ 3.06
PRKCH-216ENST00000555542 APBA3O96018 575 aa34.14■■■■□ 3.06
PRKCH-216ENST00000555542 COG3Q96JB2 828 aa34.14■■■■□ 3.06
PRKCH-216ENST00000555542 DISP2A7MBM2 1401 aa34.13■■■■□ 3.05
PRKCH-216ENST00000555542 OVOS2A0A0G2JMS6 1433 aa34.12■■■■□ 3.05
PRKCH-216ENST00000555542 CCDC7Q96M83 1385 aa34.11■■■■□ 3.05
PRKCH-216ENST00000555542 C11orf95C9JLR9 678 aaPredicted RBP34.11■■■■□ 3.05
PRKCH-216ENST00000555542 ERBB3P21860 1342 aa34.09■■■■□ 3.05
PRKCH-216ENST00000555542 EZH2Q15910 746 aaKnown RBP34.09■■■■□ 3.05
PRKCH-216ENST00000555542 NLRP2Q9NX02 1062 aa34.09■■■■□ 3.05
PRKCH-216ENST00000555542 ANKRD24Q8TF21 1146 aa34.07■■■■□ 3.04
PRKCH-216ENST00000555542 PSDA5PKW4 1024 aaPredicted RBP34.04■■■■□ 3.04
PRKCH-216ENST00000555542 PEAK1Q9H792 1746 aa34.04■■■■□ 3.04
PRKCH-216ENST00000555542 EXOC5O00471 708 aa34.03■■■■□ 3.04
PRKCH-216ENST00000555542 CAMKK2Q96RR4 588 aa34.03■■■■□ 3.04
PRKCH-216ENST00000555542 PARD3Q8TEW0 1356 aa34.02■■■■□ 3.04
PRKCH-216ENST00000555542 AMPHP49418 695 aa34■■■■□ 3.03
PRKCH-216ENST00000555542 IP6K1Q92551 441 aa34■■■■□ 3.03
PRKCH-216ENST00000555542 LTV1Q96GA3 475 aaPredicted RBP34■■■■□ 3.03
PRKCH-216ENST00000555542 GGNBP2Q9H3C7 697 aa34■■■■□ 3.03
PRKCH-216ENST00000555542 KIF20BQ96Q89 1820 aa34■■■■□ 3.03
PRKCH-216ENST00000555542 MYOM1P52179 1685 aa33.99■■■■□ 3.03
PRKCH-216ENST00000555542 MARCH10Q8NA82 808 aaPredicted RBP33.99■■■■□ 3.03
PRKCH-216ENST00000555542 POLR3GLQ9BT43 218 aa33.99■■■■□ 3.03
PRKCH-216ENST00000555542 SBF2Q86WG5 1849 aa33.99■■■■□ 3.03
PRKCH-216ENST00000555542 MAP3K19Q56UN5 1328 aa33.98■■■■□ 3.03
PRKCH-216ENST00000555542 FYB1O15117 783 aa33.97■■■■□ 3.03
PRKCH-216ENST00000555542 TNS2Q63HR2 1409 aa33.96■■■■□ 3.03
PRKCH-216ENST00000555542 IL2RBP14784 551 aa33.96■■■■□ 3.03
PRKCH-216ENST00000555542 FBLN1P23142 703 aa33.96■■■■□ 3.03
PRKCH-216ENST00000555542 R3HDM1Q15032 1099 aaKnown RBP33.95■■■■□ 3.03
PRKCH-216ENST00000555542 FAM208AQ9UK61 1670 aaKnown RBP33.95■■■■□ 3.03
PRKCH-216ENST00000555542 RREB1Q92766 1687 aa33.94■■■■□ 3.02
PRKCH-216ENST00000555542 EIF4G2P78344 907 aaKnown RBP eCLIP33.94■■■■□ 3.02
PRKCH-216ENST00000555542 HOXC9P31274 260 aa33.93■■■■□ 3.02
PRKCH-216ENST00000555542 NSD3Q9BZ95 1437 aa33.91■■■■□ 3.02
PRKCH-216ENST00000555542 RRS1Q15050 365 aaKnown RBP33.91■■■■□ 3.02
PRKCH-216ENST00000555542 BCL11BQ9C0K0 894 aaPredicted RBP33.91■■■■□ 3.02
PRKCH-216ENST00000555542 NUP188Q5SRE5 1749 aa33.9■■■■□ 3.02
PRKCH-216ENST00000555542 BCL9O00512 1426 aa33.88■■■■□ 3.01
PRKCH-216ENST00000555542 RTL1A6NKG5 1358 aa33.88■■■■□ 3.01
PRKCH-216ENST00000555542 NBPF14Q5TI25 921 aa33.88■■■■□ 3.01
PRKCH-216ENST00000555542 HSPA5P11021 654 aaKnown RBP33.87■■■■□ 3.01
PRKCH-216ENST00000555542 CARD14Q9BXL6 1004 aa33.87■■■■□ 3.01
PRKCH-216ENST00000555542 RGPD3A6NKT7 1758 aaPredicted RBP33.85■■■■□ 3.01
PRKCH-216ENST00000555542 RGPD4Q7Z3J3 1758 aa33.85■■■■□ 3.01
PRKCH-216ENST00000555542 LRP5O75197 1615 aa33.84■■■■□ 3.01
PRKCH-216ENST00000555542 PTF1AQ7RTS3 328 aa33.84■■■■□ 3.01
PRKCH-216ENST00000555542 PLSCR1O15162 318 aa33.83■■■■□ 3.01
PRKCH-216ENST00000555542 SMG6Q86US8 1419 aaKnown RBP33.83■■■■□ 3.01
PRKCH-216ENST00000555542 SRCAPQ6ZRS2 3230 aa33.83■■■■□ 3.01
PRKCH-216ENST00000555542 RGPD2P0DJD1 1756 aa33.82■■■■□ 3
PRKCH-216ENST00000555542 ACSBG1Q96GR2 724 aa33.8■■■■□ 3
PRKCH-216ENST00000555542 CGNL1Q0VF96 1302 aa33.79■■■■□ 3
PRKCH-216ENST00000555542 NHSQ6T4R5 1651 aa33.77■■■■□ 3
PRKCH-216ENST00000555542 DDX54Q8TDD1 881 aaKnown RBP33.77■■■■□ 3
PRKCH-216ENST00000555542 FLT4P35916 1363 aa33.76■■■■□ 3
PRKCH-216ENST00000555542 KCNQ2O43526 872 aa33.75■■■□□ 2.99
PRKCH-216ENST00000555542 KAT6BQ8WYB5 2073 aa33.75■■■□□ 2.99
PRKCH-216ENST00000555542 HSP90AB2PQ58FF8 381 aa33.73■■■□□ 2.99
PRKCH-216ENST00000555542 INSRP06213 1382 aa33.72■■■□□ 2.99
PRKCH-216ENST00000555542 KIF24Q5T7B8 1368 aa33.72■■■□□ 2.99
PRKCH-216ENST00000555542 PPM1GO15355 546 aaPredicted RBP33.72■■■□□ 2.99
PRKCH-216ENST00000555542 NBPF6Q5VWK0 638 aa33.71■■■□□ 2.99
PRKCH-216ENST00000555542 USHBP1Q8N6Y0 703 aa33.71■■■□□ 2.99
PRKCH-216ENST00000555542 NBPF4Q96M43 638 aa33.71■■■□□ 2.99
PRKCH-216ENST00000555542 EMILIN1Q9Y6C2 1016 aa33.7■■■□□ 2.99
PRKCH-216ENST00000555542 MEGF6O75095 1541 aa33.69■■■□□ 2.98
PRKCH-216ENST00000555542 TXNRD1Q16881 649 aa33.68■■■□□ 2.98
PRKCH-216ENST00000555542 RAPGEF4Q8WZA2 1011 aa33.68■■■□□ 2.98
PRKCH-216ENST00000555542 ZCRB1Q8TBF4 217 aaKnown RBP33.67■■■□□ 2.98
PRKCH-216ENST00000555542 BTAF1O14981 1849 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms