RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 GIGYF1O75420 1035 aaPredicted RBP14.54□□□□□ -0.08
TMEM260-206ENST00000555046 NME9Q86XW9 330 aa14.54□□□□□ -0.08
TMEM260-206ENST00000555046 KNSTRNQ9Y448 316 aa14.54□□□□□ -0.08
TMEM260-206ENST00000555046 KIF7Q2M1P5 1343 aa14.54□□□□□ -0.08
TMEM260-206ENST00000555046 CD163L1Q9NR16 1453 aa14.53□□□□□ -0.08
TMEM260-206ENST00000555046 FYB1O15117 783 aa14.53□□□□□ -0.08
TMEM260-206ENST00000555046 EVA1CP58658 441 aa14.53□□□□□ -0.08
TMEM260-206ENST00000555046 SPON1Q9HCB6 807 aa14.53□□□□□ -0.08
TMEM260-206ENST00000555046 TOPAZ1Q8N9V7 1692 aa14.52□□□□□ -0.08
TMEM260-206ENST00000555046 CPDO75976 1380 aa14.52□□□□□ -0.08
TMEM260-206ENST00000555046 VPS72Q15906 364 aa14.52□□□□□ -0.09
TMEM260-206ENST00000555046 CARD14Q9BXL6 1004 aa14.52□□□□□ -0.09
TMEM260-206ENST00000555046 NRAPQ86VF7 1730 aa14.52□□□□□ -0.09
TMEM260-206ENST00000555046 CAMKK2Q96RR4 588 aa14.51□□□□□ -0.09
TMEM260-206ENST00000555046 BTG4Q9NY30 223 aa14.51□□□□□ -0.09
TMEM260-206ENST00000555046 CASZ1Q86V15 1759 aa14.51□□□□□ -0.09
TMEM260-206ENST00000555046 KIAA0232Q92628 1395 aa14.5□□□□□ -0.09
TMEM260-206ENST00000555046 ABCA3Q99758 1704 aa14.5□□□□□ -0.09
TMEM260-206ENST00000555046 SHANK3Q9BYB0 1731 aa14.5□□□□□ -0.09
TMEM260-206ENST00000555046 KCNQ2O43526 872 aa14.5□□□□□ -0.09
TMEM260-206ENST00000555046 ARHGEF25Q86VW2 580 aa14.5□□□□□ -0.09
TMEM260-206ENST00000555046 GOLGB1Q14789 3259 aaKnown RBP14.5□□□□□ -0.09
TMEM260-206ENST00000555046 PARD3Q8TEW0 1356 aa14.49□□□□□ -0.09
TMEM260-206ENST00000555046 GGNBP2Q9H3C7 697 aa14.49□□□□□ -0.09
TMEM260-206ENST00000555046 THSD7AQ9UPZ6 1657 aa14.49□□□□□ -0.09
TMEM260-206ENST00000555046 CCDC7Q96M83 1385 aa14.48□□□□□ -0.09
TMEM260-206ENST00000555046 ZBTB7CA1YPR0 619 aa14.48□□□□□ -0.09
TMEM260-206ENST00000555046 SOX12O15370 315 aa14.48□□□□□ -0.09
TMEM260-206ENST00000555046 CHRNA2Q15822 529 aa14.48□□□□□ -0.09
TMEM260-206ENST00000555046 FAM182BQ5T319 152 aa14.48□□□□□ -0.09
TMEM260-206ENST00000555046 CCDC9Q9Y3X0 531 aaKnown RBP14.48□□□□□ -0.09
TMEM260-206ENST00000555046 TRPM3Q9HCF6 1732 aaPredicted RBP14.48□□□□□ -0.09
TMEM260-206ENST00000555046 AATKQ6ZMQ8 1374 aa14.47□□□□□ -0.09
TMEM260-206ENST00000555046 WASHC2AQ641Q2 1341 aa14.47□□□□□ -0.09
TMEM260-206ENST00000555046 A0A0G2JS52 829 aa14.46□□□□□ -0.09
TMEM260-206ENST00000555046 MYT1Q01538 1121 aa14.46□□□□□ -0.09
TMEM260-206ENST00000555046 NSD3Q9BZ95 1437 aa14.46□□□□□ -0.09
TMEM260-206ENST00000555046 ALS2Q96Q42 1657 aa14.46□□□□□ -0.1
TMEM260-206ENST00000555046 AMPHP49418 695 aa14.45□□□□□ -0.1
TMEM260-206ENST00000555046 STRN4Q9NRL3 753 aa14.45□□□□□ -0.1
TMEM260-206ENST00000555046 IP6K1Q92551 441 aa14.44□□□□□ -0.1
TMEM260-206ENST00000555046 NSD2O96028 1365 aa14.44□□□□□ -0.1
TMEM260-206ENST00000555046 CSB-PGBD3P0DP91 1061 aa14.43□□□□□ -0.1
TMEM260-206ENST00000555046 MORC1Q86VD1 984 aa14.43□□□□□ -0.1
TMEM260-206ENST00000555046 THRAP3Q9Y2W1 955 aaKnown RBP14.43□□□□□ -0.1
TMEM260-206ENST00000555046 PER1O15534 1290 aaPredicted RBP14.42□□□□□ -0.1
TMEM260-206ENST00000555046 FAM98CQ17RN3 349 aaKnown RBP14.42□□□□□ -0.1
TMEM260-206ENST00000555046 OVOS2A0A0J9YW53 1432 aa14.41□□□□□ -0.1
TMEM260-206ENST00000555046 OVOS2Q6IE36 1432 aa14.41□□□□□ -0.1
TMEM260-206ENST00000555046 CAPN15O75808 1086 aa14.41□□□□□ -0.1
TMEM260-206ENST00000555046 TOM1L2Q6ZVM7 507 aa14.41□□□□□ -0.1
TMEM260-206ENST00000555046 AXIN2Q9Y2T1 843 aa14.41□□□□□ -0.1
TMEM260-206ENST00000555046 SLIT3O75094 1523 aa14.41□□□□□ -0.1
TMEM260-206ENST00000555046 SPATA31A5Q5VU36 1347 aa14.41□□□□□ -0.1
TMEM260-206ENST00000555046 SPATA31A7Q8IWB4 1347 aa14.41□□□□□ -0.1
TMEM260-206ENST00000555046 AKAP12Q02952 1782 aa14.4□□□□□ -0.1
TMEM260-206ENST00000555046 KIF24Q5T7B8 1368 aa14.4□□□□□ -0.1
TMEM260-206ENST00000555046 AMER1Q5JTC6 1135 aaPredicted RBP14.4□□□□□ -0.1
TMEM260-206ENST00000555046 TCP11L2Q8N4U5 519 aa14.4□□□□□ -0.1
TMEM260-206ENST00000555046 MAP3K19Q56UN5 1328 aa14.4□□□□□ -0.1
TMEM260-206ENST00000555046 LARP1Q6PKG0 1096 aaKnown RBP14.39□□□□□ -0.11
TMEM260-206ENST00000555046 BARGINQ6ZT62 677 aa14.39□□□□□ -0.11
TMEM260-206ENST00000555046 CDCA7Q9BWT1 371 aaPredicted RBP14.39□□□□□ -0.11
TMEM260-206ENST00000555046 SPATA31A1Q5TZJ5 1347 aa14.39□□□□□ -0.11
TMEM260-206ENST00000555046 PPM1GO15355 546 aaPredicted RBP14.38□□□□□ -0.11
TMEM260-206ENST00000555046 TRIM37O94972 964 aa14.38□□□□□ -0.11
TMEM260-206ENST00000555046 HOXC9P31274 260 aa14.38□□□□□ -0.11
TMEM260-206ENST00000555046 RRS1Q15050 365 aaKnown RBP14.38□□□□□ -0.11
TMEM260-206ENST00000555046 CARD10Q9BWT7 1032 aa14.38□□□□□ -0.11
TMEM260-206ENST00000555046 WDR17Q8IZU2 1322 aa14.38□□□□□ -0.11
TMEM260-206ENST00000555046 MON2Q7Z3U7 1717 aa14.38□□□□□ -0.11
TMEM260-206ENST00000555046 NPC1L1Q9UHC9 1359 aa14.37□□□□□ -0.11
TMEM260-206ENST00000555046 NBPF14Q5TI25 921 aa14.37□□□□□ -0.11
TMEM260-206ENST00000555046 ANKRD24Q8TF21 1146 aa14.37□□□□□ -0.11
TMEM260-206ENST00000555046 NLRP2Q9NX02 1062 aa14.37□□□□□ -0.11
TMEM260-206ENST00000555046 USP35Q9P2H5 1018 aa14.37□□□□□ -0.11
TMEM260-206ENST00000555046 APBA3O96018 575 aa14.36□□□□□ -0.11
TMEM260-206ENST00000555046 TNNT2P45379 298 aaPredicted RBP14.36□□□□□ -0.11
TMEM260-206ENST00000555046 CC2D1BQ5T0F9 858 aaKnown RBP14.36□□□□□ -0.11
TMEM260-206ENST00000555046 POLKQ9UBT6 870 aa14.36□□□□□ -0.11
TMEM260-206ENST00000555046 COL14A1Q05707 1796 aaKnown RBP14.36□□□□□ -0.11
TMEM260-206ENST00000555046 PIK3C2AO00443 1686 aa14.36□□□□□ -0.11
TMEM260-206ENST00000555046 RTL1A6NKG5 1358 aa14.35□□□□□ -0.11
TMEM260-206ENST00000555046 RGPD3A6NKT7 1758 aaPredicted RBP14.35□□□□□ -0.11
TMEM260-206ENST00000555046 RGPD4Q7Z3J3 1758 aa14.35□□□□□ -0.11
TMEM260-206ENST00000555046 ZNF316A6NFI3 1004 aaPredicted RBP14.35□□□□□ -0.11
TMEM260-206ENST00000555046 FBLN1P23142 703 aa14.35□□□□□ -0.11
TMEM260-206ENST00000555046 CRB1P82279 1406 aa14.34□□□□□ -0.11
TMEM260-206ENST00000555046 HSPA6P17066 643 aa14.34□□□□□ -0.11
TMEM260-206ENST00000555046 LTV1Q96GA3 475 aaPredicted RBP14.34□□□□□ -0.11
TMEM260-206ENST00000555046 ERBB3P21860 1342 aa14.34□□□□□ -0.11
TMEM260-206ENST00000555046 FLT4P35916 1363 aa14.34□□□□□ -0.11
TMEM260-206ENST00000555046 PTGER2P43116 358 aa14.33□□□□□ -0.12
TMEM260-206ENST00000555046 DDX10Q13206 875 aaKnown RBP14.33□□□□□ -0.12
TMEM260-206ENST00000555046 PDE3BQ13370 1112 aa14.33□□□□□ -0.12
TMEM260-206ENST00000555046 SYT17Q9BSW7 474 aa14.33□□□□□ -0.12
TMEM260-206ENST00000555046 FHDC1Q9C0D6 1143 aaPredicted RBP14.33□□□□□ -0.12
TMEM260-206ENST00000555046 COL5A2P05997 1499 aaPredicted RBP14.32□□□□□ -0.12
TMEM260-206ENST00000555046 NFAT5O94916 1531 aa14.32□□□□□ -0.12
TMEM260-206ENST00000555046 ABCC6O95255 1503 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms