RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 USP17L15C9J2P7 530 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 USP17L10C9JJH3 530 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 USP17L13C9JLJ4 530 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 USP17L12C9JPN9 530 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 USP17L11C9JVI0 530 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 USP17L21D6R901 530 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 USP17L18D6R9N7 530 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 USP17L22D6RA61 530 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 USP17L17D6RBQ6 530 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 USP17L19D6RCP7 530 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 USP17L20D6RJB6 530 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 COPS2P61201 443 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 USP17L24Q0WX57 530 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 NCOA4Q13772 614 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 RNF135Q8IUD6 432 aa9.28□□□□□ -0.92
PSEN1-211ENST00000554995 MCCD1P59942 119 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-211ENST00000554995 CRTC2Q53ET0 693 aaPredicted RBP9.27□□□□□ -0.93
PSEN1-211ENST00000554995 SND1Q7KZF4 910 aaKnown RBP eCLIP9.27□□□□□ -0.932e-8■■■■□ 24.4
PSEN1-211ENST00000554995 PHTF2Q8N3S3 785 aa9.27□□□□□ -0.93
PSEN1-211ENST00000554995 GNEQ9Y223 722 aaKnown RBP9.27□□□□□ -0.93
PSEN1-211ENST00000554995 CCDC27Q2M243 656 aa9.26□□□□□ -0.93
PSEN1-211ENST00000554995 PLPP7Q8NBV4 271 aa9.26□□□□□ -0.93
PSEN1-211ENST00000554995 ADAM32Q8TC27 787 aa9.26□□□□□ -0.93
PSEN1-211ENST00000554995 PRKD2Q9BZL6 878 aa9.26□□□□□ -0.93
PSEN1-211ENST00000554995 RASA1P20936 1047 aa9.25□□□□□ -0.93
PSEN1-211ENST00000554995 PTK7Q13308 1070 aa9.25□□□□□ -0.93
PSEN1-211ENST00000554995 LARP1Q6PKG0 1096 aaKnown RBP9.25□□□□□ -0.93
PSEN1-211ENST00000554995 ARHGAP9Q9BRR9 750 aa9.25□□□□□ -0.93
PSEN1-211ENST00000554995 ATP5J2-PTCD1G3V325 749 aa9.24□□□□□ -0.93
PSEN1-211ENST00000554995 TLL1O43897 1013 aa9.24□□□□□ -0.93
PSEN1-211ENST00000554995 CHIC2Q9UKJ5 165 aa9.24□□□□□ -0.93
PSEN1-211ENST00000554995 LOC100996750A0A140TA64 210 aa9.23□□□□□ -0.93
PSEN1-211ENST00000554995 LZTS3O60299 673 aaPredicted RBP9.23□□□□□ -0.93
PSEN1-211ENST00000554995 ADH1BP00325 375 aa9.23□□□□□ -0.93
PSEN1-211ENST00000554995 PHLDB3Q6NSJ2 640 aa9.23□□□□□ -0.93
PSEN1-211ENST00000554995 SH3BP5LQ7L8J4 393 aa9.23□□□□□ -0.93
PSEN1-211ENST00000554995 ZNF428Q96B54 188 aa9.23□□□□□ -0.93
PSEN1-211ENST00000554995 KRTAP4-6Q9BYQ5 205 aa9.23□□□□□ -0.93
PSEN1-211ENST00000554995 UNC93B1Q9H1C4 597 aa9.23□□□□□ -0.93
PSEN1-211ENST00000554995 RBM25P49756 843 aaKnown RBP9.22□□□□□ -0.93
PSEN1-211ENST00000554995 MAP7D1Q3KQU3 841 aa9.22□□□□□ -0.93
PSEN1-211ENST00000554995 PTCRAQ6ISU1 281 aaPredicted RBP9.22□□□□□ -0.93
PSEN1-211ENST00000554995 ZBTB33Q86T24 672 aa9.22□□□□□ -0.93
PSEN1-211ENST00000554995 TXNDC2Q86VQ3 553 aa9.22□□□□□ -0.93
PSEN1-211ENST00000554995 FAM200AQ8TCP9 573 aa9.22□□□□□ -0.93
PSEN1-211ENST00000554995 SLAIN2Q9P270 581 aa9.22□□□□□ -0.93
PSEN1-211ENST00000554995 V9GY48 417 aaPredicted RBP9.22□□□□□ -0.93
PSEN1-211ENST00000554995 ZPR1O75312 459 aa9.21□□□□□ -0.94
PSEN1-211ENST00000554995 SSFA2P28290 1259 aa9.21□□□□□ -0.94
PSEN1-211ENST00000554995 FAM69CQ0P6D2 419 aa9.21□□□□□ -0.94
PSEN1-211ENST00000554995 EML3Q32P44 896 aa9.21□□□□□ -0.94
PSEN1-211ENST00000554995 LCE2AQ5TA79 106 aaPredicted RBP9.21□□□□□ -0.94
PSEN1-211ENST00000554995 ANKMY2Q8IV38 441 aa9.21□□□□□ -0.94
PSEN1-211ENST00000554995 CCDC24Q8N4L8 307 aa9.21□□□□□ -0.94
PSEN1-211ENST00000554995 CCER1Q8TC90 406 aaPredicted RBP9.21□□□□□ -0.94
PSEN1-211ENST00000554995 CDCA7Q9BWT1 371 aaPredicted RBP9.21□□□□□ -0.94
PSEN1-211ENST00000554995 TSGA10IPQ3SY00 556 aa9.2□□□□□ -0.94
PSEN1-211ENST00000554995 OGFOD1Q8N543 542 aa9.2□□□□□ -0.94
PSEN1-211ENST00000554995 CLP1Q92989 425 aaKnown RBP9.2□□□□□ -0.94
PSEN1-211ENST00000554995 DZIP3Q86Y13 1208 aaKnown RBP9.19□□□□□ -0.94
PSEN1-211ENST00000554995 CARD14Q9BXL6 1004 aa9.19□□□□□ -0.94
PSEN1-211ENST00000554995 CLDN10P78369 228 aa9.18□□□□□ -0.94
PSEN1-211ENST00000554995 DPYDQ12882 1025 aa9.18□□□□□ -0.94
PSEN1-211ENST00000554995 SH3RF1Q7Z6J0 888 aa9.18□□□□□ -0.94
PSEN1-211ENST00000554995 MTRQ99707 1265 aa9.18□□□□□ -0.94
PSEN1-211ENST00000554995 IL21Q9HBE4 155 aa9.18□□□□□ -0.94
PSEN1-211ENST00000554995 MAGEB6P1A0A0J9YX57 407 aa9.17□□□□□ -0.94
PSEN1-211ENST00000554995 TJAP1Q5JTD0 557 aa9.17□□□□□ -0.94
PSEN1-211ENST00000554995 TRIM50Q86XT4 487 aa9.17□□□□□ -0.94
PSEN1-211ENST00000554995 ZNF594Q96JF6 807 aaPredicted RBP9.17□□□□□ -0.94
PSEN1-211ENST00000554995 CCDC85AQ96PX6 553 aaPredicted RBP9.17□□□□□ -0.94
PSEN1-211ENST00000554995 DNAAF2Q9NVR5 837 aaKnown RBP9.17□□□□□ -0.94
PSEN1-211ENST00000554995 PDZRN3Q9UPQ7 1066 aa9.17□□□□□ -0.94
PSEN1-211ENST00000554995 DOLKQ9UPQ8 538 aa9.17□□□□□ -0.94
PSEN1-211ENST00000554995 NOD1Q9Y239 953 aa9.17□□□□□ -0.94
PSEN1-211ENST00000554995 ARID4AP29374 1257 aaPredicted RBP9.16□□□□□ -0.94
PSEN1-211ENST00000554995 ATP1A2P50993 1020 aa9.16□□□□□ -0.94
PSEN1-211ENST00000554995 SLC6A16Q9GZN6 736 aa9.16□□□□□ -0.94
PSEN1-211ENST00000554995 GIGYF1O75420 1035 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-211ENST00000554995 ATP2B4P23634 1241 aa9.15□□□□□ -0.94
PSEN1-211ENST00000554995 SWI5Q1ZZU3 235 aa9.15□□□□□ -0.94
PSEN1-211ENST00000554995 ERFEQ4G0M1 354 aa9.15□□□□□ -0.94
PSEN1-211ENST00000554995 BAP1Q92560 729 aa9.15□□□□□ -0.94
PSEN1-211ENST00000554995 AMOTL2Q9Y2J4 779 aa9.15□□□□□ -0.94
PSEN1-211ENST00000554995 OXLD1Q5BKU9 147 aa9.14□□□□□ -0.95
PSEN1-211ENST00000554995 LARGE2Q8N3Y3 721 aa9.14□□□□□ -0.95
PSEN1-211ENST00000554995 ZNF516Q92618 1163 aa9.14□□□□□ -0.95
PSEN1-211ENST00000554995 KIAA1024Q9UPX6 916 aa9.14□□□□□ -0.95
PSEN1-211ENST00000554995 ZBTB7BO15156 539 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-211ENST00000554995 DKK1O94907 266 aa9.13□□□□□ -0.95
PSEN1-211ENST00000554995 AGERQ15109 404 aa9.13□□□□□ -0.95
PSEN1-211ENST00000554995 LINC01559Q495D7 138 aa9.13□□□□□ -0.95
PSEN1-211ENST00000554995 C4orf48Q5BLP8 95 aa9.13□□□□□ -0.95
PSEN1-211ENST00000554995 TREML4Q6UXN2 200 aa9.13□□□□□ -0.95
PSEN1-211ENST00000554995 BPHLQ86WA6 291 aaPredicted RBP9.13□□□□□ -0.95
PSEN1-211ENST00000554995 FOXJ1Q92949 421 aa9.13□□□□□ -0.95
PSEN1-211ENST00000554995 GTF2IP78347 998 aa9.12□□□□□ -0.95
PSEN1-211ENST00000554995 SIX5Q8N196 739 aa9.12□□□□□ -0.95
PSEN1-211ENST00000554995 ZNF511Q8NB15 262 aa9.12□□□□□ -0.95
PSEN1-211ENST00000554995 SERPINB4P48594 390 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms