RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 CEBPAP49715 358 aaPredicted RBP8.41□□□□□ -1.06
ATXN3-230ENST00000554673 ANKK1Q8NFD2 765 aa8.41□□□□□ -1.06
ATXN3-230ENST00000554673 ZNF142P52746 1687 aaPredicted RBP8.4□□□□□ -1.06
ATXN3-230ENST00000554673 WASHC2AQ641Q2 1341 aa8.4□□□□□ -1.06
ATXN3-230ENST00000554673 BCAMP50895 628 aa8.4□□□□□ -1.06
ATXN3-230ENST00000554673 PROX2Q3B8N5 592 aa8.4□□□□□ -1.06
ATXN3-230ENST00000554673 DCAF11Q8TEB1 546 aa8.4□□□□□ -1.06
ATXN3-230ENST00000554673 SETBP1Q9Y6X0 1596 aa8.39□□□□□ -1.07
ATXN3-230ENST00000554673 ACIN1Q9UKV3 1341 aaKnown RBP8.39□□□□□ -1.07
ATXN3-230ENST00000554673 PDE4AP27815 886 aa8.39□□□□□ -1.07
ATXN3-230ENST00000554673 MAP3K9P80192 1104 aa8.39□□□□□ -1.07
ATXN3-230ENST00000554673 ANO8Q9HCE9 1232 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-230ENST00000554673 PODXL2Q9NZ53 605 aa8.39□□□□□ -1.07
ATXN3-230ENST00000554673 USP47Q96K76 1375 aa8.38□□□□□ -1.07
ATXN3-230ENST00000554673 NCKAP5LQ9HCH0 1330 aa8.38□□□□□ -1.07
ATXN3-230ENST00000554673 QRICH2Q9H0J4 1663 aa8.38□□□□□ -1.07
ATXN3-230ENST00000554673 CADPS2Q86UW7 1296 aa8.38□□□□□ -1.07
ATXN3-230ENST00000554673 ZC3H15Q8WU90 426 aaKnown RBP8.38□□□□□ -1.07
ATXN3-230ENST00000554673 TESK2Q96S53 571 aa8.38□□□□□ -1.07
ATXN3-230ENST00000554673 ALKQ9UM73 1620 aa8.38□□□□□ -1.07
ATXN3-230ENST00000554673 NEUROD2Q15784 382 aa8.37□□□□□ -1.07
ATXN3-230ENST00000554673 NUTM2DQ5VT03 806 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-230ENST00000554673 LARP6Q9BRS8 491 aaKnown RBP8.37□□□□□ -1.07
ATXN3-230ENST00000554673 MED14O60244 1454 aa8.37□□□□□ -1.07
ATXN3-230ENST00000554673 ARHGAP23Q9P227 1491 aa8.37□□□□□ -1.07
ATXN3-230ENST00000554673 DISP3Q9P2K9 1392 aa8.36□□□□□ -1.07
ATXN3-230ENST00000554673 PPP1R3GB7ZBB8 358 aa8.36□□□□□ -1.07
ATXN3-230ENST00000554673 CFAP70Q5T0N1 1121 aa8.36□□□□□ -1.07
ATXN3-230ENST00000554673 RABGEF1Q9UJ41 708 aa8.36□□□□□ -1.07
ATXN3-230ENST00000554673 CCDC7Q96M83 1385 aa8.35□□□□□ -1.07
ATXN3-230ENST00000554673 TULP4Q9NRJ4 1543 aa8.35□□□□□ -1.07
ATXN3-230ENST00000554673 KNDC1Q76NI1 1749 aa8.35□□□□□ -1.07
ATXN3-230ENST00000554673 ITGBL1O95965 494 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-230ENST00000554673 COL9A1P20849 921 aa8.35□□□□□ -1.07
ATXN3-230ENST00000554673 ZNF326Q5BKZ1 582 aaKnown RBP8.35□□□□□ -1.07
ATXN3-230ENST00000554673 ADAMTS13Q76LX8 1427 aa8.35□□□□□ -1.07
ATXN3-230ENST00000554673 STRCP1A6NGW2 1772 aa8.35□□□□□ -1.07
ATXN3-230ENST00000554673 CEP170BQ9Y4F5 1589 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-230ENST00000554673 TNRQ92752 1358 aa8.35□□□□□ -1.07
ATXN3-230ENST00000554673 SLIT1O75093 1534 aa8.34□□□□□ -1.07
ATXN3-230ENST00000554673 KIF7Q2M1P5 1343 aa8.34□□□□□ -1.07
ATXN3-230ENST00000554673 DDX27Q96GQ7 796 aaKnown RBP8.34□□□□□ -1.07
ATXN3-230ENST00000554673 WDR70Q9NW82 654 aa8.34□□□□□ -1.07
ATXN3-230ENST00000554673 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.34□□□□□ -1.07
ATXN3-230ENST00000554673 PTPRUQ92729 1446 aa8.33□□□□□ -1.08
ATXN3-230ENST00000554673 SLC24A3Q9HC58 644 aa8.33□□□□□ -1.08
ATXN3-230ENST00000554673 RIMS2Q9UQ26 1411 aa8.33□□□□□ -1.08
ATXN3-230ENST00000554673 PCDHGA10Q9Y5H3 936 aa8.33□□□□□ -1.08
ATXN3-230ENST00000554673 XRN1Q8IZH2 1706 aaKnown RBP8.32□□□□□ -1.08
ATXN3-230ENST00000554673 ST20-MTHFSA0A0A6YYL1 179 aa8.32□□□□□ -1.08
ATXN3-230ENST00000554673 SOWAHBA6NEL2 793 aa8.32□□□□□ -1.08
ATXN3-230ENST00000554673 KCNC4Q03721 635 aa8.32□□□□□ -1.08
ATXN3-230ENST00000554673 WBP1LQ9NX94 342 aa8.32□□□□□ -1.08
ATXN3-230ENST00000554673 LTKP29376 864 aa8.31□□□□□ -1.08
ATXN3-230ENST00000554673 DIEXFQ68CQ4 756 aaKnown RBP8.31□□□□□ -1.08
ATXN3-230ENST00000554673 TMEM132EQ6IEE7 984 aa8.31□□□□□ -1.08
ATXN3-230ENST00000554673 ARHGEF1Q92888 912 aaKnown RBP8.31□□□□□ -1.08
ATXN3-230ENST00000554673 ZFRQ96KR1 1074 aaKnown RBP8.31□□□□□ -1.08
ATXN3-230ENST00000554673 C14orf93Q9H972 538 aaKnown RBP8.31□□□□□ -1.08
ATXN3-230ENST00000554673 KIAA1468Q9P260 1216 aa8.31□□□□□ -1.08
ATXN3-230ENST00000554673 SEPT9Q9UHD8 586 aaPredicted RBP8.31□□□□□ -1.08
ATXN3-230ENST00000554673 ROCK2O75116 1388 aaKnown RBP8.31□□□□□ -1.08
ATXN3-230ENST00000554673 SCAF11Q99590 1463 aaKnown RBP8.31□□□□□ -1.08
ATXN3-230ENST00000554673 RGPD8O14715 1765 aaPredicted RBP8.3□□□□□ -1.08
ATXN3-230ENST00000554673 STRCQ7RTU9 1775 aa8.3□□□□□ -1.08
ATXN3-230ENST00000554673 SETD1BQ9UPS6 1966 aaKnown RBP8.3□□□□□ -1.08
ATXN3-230ENST00000554673 DDX10Q13206 875 aaKnown RBP8.3□□□□□ -1.08
ATXN3-230ENST00000554673 METP08581 1390 aa8.3□□□□□ -1.08
ATXN3-230ENST00000554673 PLEKHH1Q9ULM0 1364 aa8.3□□□□□ -1.08
ATXN3-230ENST00000554673 NLRP1Q9C000 1473 aa8.3□□□□□ -1.08
ATXN3-230ENST00000554673 USP32Q8NFA0 1604 aa8.29□□□□□ -1.08
ATXN3-230ENST00000554673 CHD2O14647 1828 aaKnown RBP8.29□□□□□ -1.08
ATXN3-230ENST00000554673 CCDC184Q52MB2 194 aa8.29□□□□□ -1.08
ATXN3-230ENST00000554673 EMILIN3Q9NT22 766 aa8.29□□□□□ -1.08
ATXN3-230ENST00000554673 SLC52A1Q9NWF4 448 aa8.29□□□□□ -1.08
ATXN3-230ENST00000554673 XIRP1Q702N8 1843 aaKnown RBP8.29□□□□□ -1.08
ATXN3-230ENST00000554673 CPS1P31327 1500 aa8.29□□□□□ -1.08
ATXN3-230ENST00000554673 ARID4BQ4LE39 1312 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-230ENST00000554673 TMEM2Q9UHN6 1383 aa8.28□□□□□ -1.08
ATXN3-230ENST00000554673 TESPA1A2RU30 521 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-230ENST00000554673 EIF4G2P78344 907 aaKnown RBP eCLIP8.28□□□□□ -1.08
ATXN3-230ENST00000554673 TYW1BQ6NUM6 668 aa8.28□□□□□ -1.08
ATXN3-230ENST00000554673 LAPTM4BQ86VI4 370 aa8.28□□□□□ -1.08
ATXN3-230ENST00000554673 CARD11Q9BXL7 1154 aa8.28□□□□□ -1.08
ATXN3-230ENST00000554673 NYAP1Q6ZVC0 841 aa8.27□□□□□ -1.09
ATXN3-230ENST00000554673 FBXW7Q969H0 707 aa8.27□□□□□ -1.09
ATXN3-230ENST00000554673 DLC1Q96QB1 1528 aa8.27□□□□□ -1.09
ATXN3-230ENST00000554673 TOPAZ1Q8N9V7 1692 aa8.27□□□□□ -1.09
ATXN3-230ENST00000554673 RPGRIP1LQ68CZ1 1315 aa8.27□□□□□ -1.09
ATXN3-230ENST00000554673 CD163L1Q9NR16 1453 aa8.26□□□□□ -1.09
ATXN3-230ENST00000554673 NALCNQ8IZF0 1738 aa8.26□□□□□ -1.09
ATXN3-230ENST00000554673 MARF1Q9Y4F3 1742 aaKnown RBP8.26□□□□□ -1.09
ATXN3-230ENST00000554673 ZMYND10O75800 440 aa8.26□□□□□ -1.09
ATXN3-230ENST00000554673 HPS5Q9UPZ3 1129 aa8.26□□□□□ -1.09
ATXN3-230ENST00000554673 YTHDC2Q9H6S0 1430 aaKnown RBP8.26□□□□□ -1.09
ATXN3-230ENST00000554673 GFRA3O60609 400 aa8.25□□□□□ -1.09
ATXN3-230ENST00000554673 PHF14O94880 888 aa8.25□□□□□ -1.09
ATXN3-230ENST00000554673 TECPR2O15040 1411 aa8.25□□□□□ -1.09
ATXN3-230ENST00000554673 PER1O15534 1290 aaPredicted RBP8.24□□□□□ -1.09
ATXN3-230ENST00000554673 RBM33Q96EV2 1170 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms