RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
ATXN3-229ENST00000554672 GDF9O60383 454 aa7.92□□□□□ -1.14
ATXN3-229ENST00000554672 ZNF697Q5TEC3 545 aa7.92□□□□□ -1.14
ATXN3-229ENST00000554672 GGT6Q6P531 493 aa7.92□□□□□ -1.14
ATXN3-229ENST00000554672 LMOD2Q6P5Q4 547 aa7.92□□□□□ -1.14
ATXN3-229ENST00000554672 HLA-CQ95604 372 aa7.92□□□□□ -1.14
ATXN3-229ENST00000554672 REPIN1Q9BWE0 567 aaKnown RBP7.92□□□□□ -1.14
ATXN3-229ENST00000554672 ZNF777Q9ULD5 760 aaPredicted RBP7.92□□□□□ -1.14
ATXN3-229ENST00000554672 DIP2CQ9Y2E4 1556 aa7.92□□□□□ -1.14
ATXN3-229ENST00000554672 HNRNPMP52272 730 aaKnown RBP eCLIP7.91□□□□□ -1.14
ATXN3-229ENST00000554672 PRR20EP86478 221 aa7.91□□□□□ -1.14
ATXN3-229ENST00000554672 PRR20CP86479 221 aa7.91□□□□□ -1.14
ATXN3-229ENST00000554672 PRR20DP86480 221 aa7.91□□□□□ -1.14
ATXN3-229ENST00000554672 PRR20BP86481 221 aa7.91□□□□□ -1.14
ATXN3-229ENST00000554672 PRR20AP86496 221 aa7.91□□□□□ -1.14
ATXN3-229ENST00000554672 PLA2R1Q13018 1463 aa7.91□□□□□ -1.14
ATXN3-229ENST00000554672 KDM4AO75164 1064 aa7.9□□□□□ -1.14
ATXN3-229ENST00000554672 FAM217BQ9NTX9 383 aaPredicted RBP7.9□□□□□ -1.14
ATXN3-229ENST00000554672 FCF1Q9Y324 198 aaKnown RBP7.9□□□□□ -1.14
ATXN3-229ENST00000554672 C3P01024 1663 aa7.89□□□□□ -1.15
ATXN3-229ENST00000554672 TCOF1Q13428 1488 aaKnown RBP7.89□□□□□ -1.15
ATXN3-229ENST00000554672 PTPRKQ15262 1439 aa7.89□□□□□ -1.15
ATXN3-229ENST00000554672 BARGINQ6ZT62 677 aa7.89□□□□□ -1.15
ATXN3-229ENST00000554672 ANKLE2Q86XL3 938 aa7.89□□□□□ -1.15
ATXN3-229ENST00000554672 PKD2L1Q9P0L9 805 aa7.89□□□□□ -1.15
ATXN3-229ENST00000554672 TNFRSF10AO00220 468 aa7.88□□□□□ -1.15
ATXN3-229ENST00000554672 ZMYND10O75800 440 aa7.88□□□□□ -1.15
ATXN3-229ENST00000554672 GRIPAP1Q4V328 841 aa7.88□□□□□ -1.15
ATXN3-229ENST00000554672 MSS51Q4VC12 460 aa7.88□□□□□ -1.15
ATXN3-229ENST00000554672 THEMISQ8N1K5 641 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-229ENST00000554672 GPCPD1Q9NPB8 672 aa7.88□□□□□ -1.15
ATXN3-229ENST00000554672 KIF14Q15058 1648 aa7.88□□□□□ -1.15
ATXN3-229ENST00000554672 ARHGAP35Q9NRY4 1499 aa7.87□□□□□ -1.15
ATXN3-229ENST00000554672 CLCN1P35523 988 aa7.87□□□□□ -1.15
ATXN3-229ENST00000554672 ZC3H15Q8WU90 426 aaKnown RBP7.87□□□□□ -1.15
ATXN3-229ENST00000554672 CFDP1Q9UEE9 299 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-229ENST00000554672 MYO5CQ9NQX4 1742 aa7.86□□□□□ -1.15
ATXN3-229ENST00000554672 ABCA6Q8N139 1617 aa7.86□□□□□ -1.15
ATXN3-229ENST00000554672 HOXA2O43364 376 aa7.86□□□□□ -1.15
ATXN3-229ENST00000554672 RPIAP49247 311 aa7.86□□□□□ -1.15
ATXN3-229ENST00000554672 GUCA2AQ02747 115 aa7.86□□□□□ -1.15
ATXN3-229ENST00000554672 SHANK2Q9UPX8 1470 aa7.86□□□□□ -1.15
ATXN3-229ENST00000554672 KIAA1107Q9UPP5 1409 aa7.86□□□□□ -1.15
ATXN3-229ENST00000554672 CPS1P31327 1500 aa7.85□□□□□ -1.15
ATXN3-229ENST00000554672 ABCC1P33527 1531 aa7.85□□□□□ -1.15
ATXN3-229ENST00000554672 MMP16P51512 607 aa7.85□□□□□ -1.15
ATXN3-229ENST00000554672 USP46P62068 366 aa7.85□□□□□ -1.15
ATXN3-229ENST00000554672 MYT1Q01538 1121 aa7.85□□□□□ -1.15
ATXN3-229ENST00000554672 Q3C1V9 767 aa7.85□□□□□ -1.15
ATXN3-229ENST00000554672 FBXO31Q5XUX0 539 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-229ENST00000554672 A2MP01023 1474 aa7.85□□□□□ -1.15
ATXN3-229ENST00000554672 MED1Q15648 1581 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-229ENST00000554672 A2ML1A8K2U0 1454 aa7.84□□□□□ -1.15
ATXN3-229ENST00000554672 DGAT1O75907 488 aa7.84□□□□□ -1.15
ATXN3-229ENST00000554672 FOXC1Q12948 553 aa7.84□□□□□ -1.15
ATXN3-229ENST00000554672 KRI1Q8N9T8 703 aaKnown RBP7.84□□□□□ -1.15
ATXN3-229ENST00000554672 USB1Q9BQ65 265 aaKnown RBP7.84□□□□□ -1.15
ATXN3-229ENST00000554672 TNRQ92752 1358 aa7.84□□□□□ -1.16
ATXN3-229ENST00000554672 DXOO77932 396 aaKnown RBP7.83□□□□□ -1.16
ATXN3-229ENST00000554672 SSTR3P32745 418 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-229ENST00000554672 SYMPKQ92797 1274 aaKnown RBP7.83□□□□□ -1.16
ATXN3-229ENST00000554672 RGS17Q9UGC6 210 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-229ENST00000554672 CASKIN1Q8WXD9 1431 aa7.83□□□□□ -1.16
ATXN3-229ENST00000554672 CEP170BQ9Y4F5 1589 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-229ENST00000554672 GPATCH8Q9UKJ3 1502 aaKnown RBP7.83□□□□□ -1.16
ATXN3-229ENST00000554672 WASHC2CQ9Y4E1 1318 aa7.82□□□□□ -1.16
ATXN3-229ENST00000554672 CCDC18Q5T9S5 1454 aa7.82□□□□□ -1.16
ATXN3-229ENST00000554672 PLEKHH2Q8IVE3 1493 aa7.82□□□□□ -1.16
ATXN3-229ENST00000554672 KIDINS220Q9ULH0 1771 aa7.82□□□□□ -1.16
ATXN3-229ENST00000554672 KIF3BO15066 747 aa7.82□□□□□ -1.16
ATXN3-229ENST00000554672 CD2BP2O95400 341 aaKnown RBP7.82□□□□□ -1.16
ATXN3-229ENST00000554672 PKDCCQ504Y2 493 aa7.82□□□□□ -1.16
ATXN3-229ENST00000554672 SAMD9LQ8IVG5 1584 aa7.82□□□□□ -1.16
ATXN3-229ENST00000554672 DHX29Q7Z478 1369 aaKnown RBP7.82□□□□□ -1.16
ATXN3-229ENST00000554672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.82□□□□□ -1.16
ATXN3-229ENST00000554672 FAM187AA6NFU0 413 aa7.81□□□□□ -1.16
ATXN3-229ENST00000554672 AMHR2Q16671 573 aa7.81□□□□□ -1.16
ATXN3-229ENST00000554672 TOR4AQ9NXH8 423 aa7.81□□□□□ -1.16
ATXN3-229ENST00000554672 PCDHGC3Q9UN70 934 aa7.81□□□□□ -1.16
ATXN3-229ENST00000554672 MROH2AA6NES4 1674 aa7.81□□□□□ -1.16
ATXN3-229ENST00000554672 CCNB3Q8WWL7 1395 aa7.81□□□□□ -1.16
ATXN3-229ENST00000554672 NPHP4O75161 1426 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-229ENST00000554672 MIA2Q96PC5 1412 aa7.8□□□□□ -1.16
ATXN3-229ENST00000554672 ZNF787Q6DD87 383 aa7.8□□□□□ -1.16
ATXN3-229ENST00000554672 CDC42BPBQ9Y5S2 1711 aa7.8□□□□□ -1.16
ATXN3-229ENST00000554672 ZNF644Q9H582 1327 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-229ENST00000554672 RTEL1-TNFRSF6BF6WH68 1400 aa7.79□□□□□ -1.16
ATXN3-229ENST00000554672 POTECB2RU33 542 aa7.79□□□□□ -1.16
ATXN3-229ENST00000554672 NUTM1Q86Y26 1132 aa7.79□□□□□ -1.16
ATXN3-229ENST00000554672 SPIRE2Q8WWL2 714 aa7.79□□□□□ -1.16
ATXN3-229ENST00000554672 ATP7AQ04656 1500 aa7.78□□□□□ -1.16
ATXN3-229ENST00000554672 PREX2Q70Z35 1606 aa7.78□□□□□ -1.16
ATXN3-229ENST00000554672 TRIM32Q13049 653 aa7.78□□□□□ -1.16
ATXN3-229ENST00000554672 POTEAQ6S8J7 498 aa7.78□□□□□ -1.16
ATXN3-229ENST00000554672 GIGYF2Q6Y7W6 1299 aaKnown RBP7.78□□□□□ -1.16
ATXN3-229ENST00000554672 MED14O60244 1454 aa7.78□□□□□ -1.16
ATXN3-229ENST00000554672 ITSN2Q9NZM3 1697 aa7.78□□□□□ -1.16
ATXN3-229ENST00000554672 DNMT1P26358 1616 aaKnown RBP7.78□□□□□ -1.16
ATXN3-229ENST00000554672 MYO3AQ8NEV4 1616 aa7.78□□□□□ -1.16
ATXN3-229ENST00000554672 SYCP2Q9BX26 1530 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms