RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 PIK3C2AO00443 1686 aa15.67■□□□□ 0.1
ABCD4-221ENST00000554453 SOX12O15370 315 aa15.66■□□□□ 0.1
ABCD4-221ENST00000554453 NME9Q86XW9 330 aa15.66■□□□□ 0.1
ABCD4-221ENST00000554453 CARD10Q9BWT7 1032 aa15.66■□□□□ 0.1
ABCD4-221ENST00000554453 CD163L1Q9NR16 1453 aa15.65■□□□□ 0.1
ABCD4-221ENST00000554453 APBA3O96018 575 aa15.65■□□□□ 0.1
ABCD4-221ENST00000554453 CDCA7Q9BWT1 371 aaPredicted RBP15.65■□□□□ 0.1
ABCD4-221ENST00000554453 DISP2A7MBM2 1401 aa15.64■□□□□ 0.09
ABCD4-221ENST00000554453 EZH2Q15910 746 aaKnown RBP15.64■□□□□ 0.09
ABCD4-221ENST00000554453 CSB-PGBD3P0DP91 1061 aa15.63■□□□□ 0.09
ABCD4-221ENST00000554453 DDB1Q16531 1140 aa15.63■□□□□ 0.09
ABCD4-221ENST00000554453 CLSPNQ9HAW4 1339 aa15.63■□□□□ 0.09
ABCD4-221ENST00000554453 EDC4Q6P2E9 1401 aaKnown RBP15.62■□□□□ 0.09
ABCD4-221ENST00000554453 NINLQ9Y2I6 1382 aa15.62■□□□□ 0.09
ABCD4-221ENST00000554453 RGPD1P0DJD0 1748 aa15.61■□□□□ 0.09
ABCD4-221ENST00000554453 MON2Q7Z3U7 1717 aa15.61■□□□□ 0.09
ABCD4-221ENST00000554453 TMF1P82094 1093 aa15.61■□□□□ 0.09
ABCD4-221ENST00000554453 PCGF6Q9BYE7 350 aa15.61■□□□□ 0.09
ABCD4-221ENST00000554453 RGPD5Q99666 1765 aa15.61■□□□□ 0.09
ABCD4-221ENST00000554453 A0A1W2PP64 1363 aa15.61■□□□□ 0.09
ABCD4-221ENST00000554453 EXOC5O00471 708 aa15.6■□□□□ 0.09
ABCD4-221ENST00000554453 NFAT5O94916 1531 aa15.59■□□□□ 0.09
ABCD4-221ENST00000554453 PSDA5PKW4 1024 aaPredicted RBP15.59■□□□□ 0.09
ABCD4-221ENST00000554453 MARCH10Q8NA82 808 aaPredicted RBP15.59■□□□□ 0.09
ABCD4-221ENST00000554453 PARD3Q8TEW0 1356 aa15.59■□□□□ 0.09
ABCD4-221ENST00000554453 KAT6BQ8WYB5 2073 aa15.58■□□□□ 0.09
ABCD4-221ENST00000554453 PARP4Q9UKK3 1724 aaKnown RBP15.58■□□□□ 0.08
ABCD4-221ENST00000554453 CDCA8Q53HL2 280 aa15.58■□□□□ 0.08
ABCD4-221ENST00000554453 PLSCR1O15162 318 aa15.57■□□□□ 0.08
ABCD4-221ENST00000554453 IP6K1Q92551 441 aa15.57■□□□□ 0.08
ABCD4-221ENST00000554453 USP47Q96K76 1375 aa15.57■□□□□ 0.08
ABCD4-221ENST00000554453 CCDC7Q96M83 1385 aa15.57■□□□□ 0.08
ABCD4-221ENST00000554453 R3HDM1Q15032 1099 aaKnown RBP15.56■□□□□ 0.08
ABCD4-221ENST00000554453 COG3Q96JB2 828 aa15.56■□□□□ 0.08
ABCD4-221ENST00000554453 BCL11BQ9C0K0 894 aaPredicted RBP15.56■□□□□ 0.08
ABCD4-221ENST00000554453 NLRP2Q9NX02 1062 aa15.56■□□□□ 0.08
ABCD4-221ENST00000554453 ERBB3P21860 1342 aa15.56■□□□□ 0.08
ABCD4-221ENST00000554453 TNS1Q9HBL0 1735 aaKnown RBP15.55■□□□□ 0.08
ABCD4-221ENST00000554453 ABCC6O95255 1503 aa15.55■□□□□ 0.08
ABCD4-221ENST00000554453 OVOS2A0A0G2JMS6 1433 aa15.55■□□□□ 0.08
ABCD4-221ENST00000554453 OVOS2A0A0J9YW53 1432 aa15.55■□□□□ 0.08
ABCD4-221ENST00000554453 BCL9O00512 1426 aa15.55■□□□□ 0.08
ABCD4-221ENST00000554453 OVOS2Q6IE36 1432 aa15.55■□□□□ 0.08
ABCD4-221ENST00000554453 NBPF14Q5TI25 921 aa15.55■□□□□ 0.08
ABCD4-221ENST00000554453 ANKRD24Q8TF21 1146 aa15.55■□□□□ 0.08
ABCD4-221ENST00000554453 USP54Q70EL1 1684 aa15.54■□□□□ 0.08
ABCD4-221ENST00000554453 ANKRD36BQ8N2N9 1353 aa15.54■□□□□ 0.08
ABCD4-221ENST00000554453 FYB1O15117 783 aa15.54■□□□□ 0.08
ABCD4-221ENST00000554453 IL2RBP14784 551 aa15.53■□□□□ 0.08
ABCD4-221ENST00000554453 FBLN1P23142 703 aa15.53■□□□□ 0.08
ABCD4-221ENST00000554453 PTF1AQ7RTS3 328 aa15.53■□□□□ 0.08
ABCD4-221ENST00000554453 SRCAPQ6ZRS2 3230 aa15.52■□□□□ 0.08
ABCD4-221ENST00000554453 SBF2Q86WG5 1849 aa15.52■□□□□ 0.07
ABCD4-221ENST00000554453 MAP3K19Q56UN5 1328 aa15.51■□□□□ 0.07
ABCD4-221ENST00000554453 AMPHP49418 695 aa15.51■□□□□ 0.07
ABCD4-221ENST00000554453 PROM2Q8N271 834 aa15.51■□□□□ 0.07
ABCD4-221ENST00000554453 PEAK1Q9H792 1746 aa15.51■□□□□ 0.07
ABCD4-221ENST00000554453 HOXC9P31274 260 aa15.5■□□□□ 0.07
ABCD4-221ENST00000554453 LTV1Q96GA3 475 aaPredicted RBP15.49■□□□□ 0.07
ABCD4-221ENST00000554453 CARD14Q9BXL6 1004 aa15.49■□□□□ 0.07
ABCD4-221ENST00000554453 GGNBP2Q9H3C7 697 aa15.49■□□□□ 0.07
ABCD4-221ENST00000554453 LTN1O94822 1766 aa15.49■□□□□ 0.07
ABCD4-221ENST00000554453 LRRC37A3O60309 1634 aa15.48■□□□□ 0.07
ABCD4-221ENST00000554453 KCNQ2O43526 872 aa15.47■□□□□ 0.07
ABCD4-221ENST00000554453 RRS1Q15050 365 aaKnown RBP15.46■□□□□ 0.07
ABCD4-221ENST00000554453 WNK3Q9BYP7 1800 aa15.45■□□□□ 0.06
ABCD4-221ENST00000554453 CCER1Q8TC90 406 aaPredicted RBP15.45■□□□□ 0.06
ABCD4-221ENST00000554453 TNS2Q63HR2 1409 aa15.44■□□□□ 0.06
ABCD4-221ENST00000554453 LRP5O75197 1615 aa15.44■□□□□ 0.06
ABCD4-221ENST00000554453 TXNRD1Q16881 649 aa15.44■□□□□ 0.06
ABCD4-221ENST00000554453 ACSBG1Q96GR2 724 aa15.44■□□□□ 0.06
ABCD4-221ENST00000554453 RREB1Q92766 1687 aa15.44■□□□□ 0.06
ABCD4-221ENST00000554453 EIF4G2P78344 907 aaKnown RBP eCLIP15.43■□□□□ 0.06
ABCD4-221ENST00000554453 NBPF6Q5VWK0 638 aa15.43■□□□□ 0.06
ABCD4-221ENST00000554453 DDX54Q8TDD1 881 aaKnown RBP15.43■□□□□ 0.06
ABCD4-221ENST00000554453 NBPF4Q96M43 638 aa15.43■□□□□ 0.06
ABCD4-221ENST00000554453 ZCRB1Q8TBF4 217 aaKnown RBP15.42■□□□□ 0.06
ABCD4-221ENST00000554453 RTL1A6NKG5 1358 aa15.41■□□□□ 0.06
ABCD4-221ENST00000554453 NUP188Q5SRE5 1749 aa15.41■□□□□ 0.06
ABCD4-221ENST00000554453 HSP90AB2PQ58FF8 381 aa15.41■□□□□ 0.06
ABCD4-221ENST00000554453 SPON1Q9HCB6 807 aa15.41■□□□□ 0.06
ABCD4-221ENST00000554453 ANO8Q9HCE9 1232 aaPredicted RBP15.41■□□□□ 0.06
ABCD4-221ENST00000554453 HSPA5P11021 654 aaKnown RBP15.4■□□□□ 0.06
ABCD4-221ENST00000554453 RGPD3A6NKT7 1758 aaPredicted RBP15.39■□□□□ 0.05
ABCD4-221ENST00000554453 RGPD4Q7Z3J3 1758 aa15.39■□□□□ 0.05
ABCD4-221ENST00000554453 KIF24Q5T7B8 1368 aa15.39■□□□□ 0.05
ABCD4-221ENST00000554453 CGNL1Q0VF96 1302 aa15.39■□□□□ 0.05
ABCD4-221ENST00000554453 INSRP06213 1382 aa15.38■□□□□ 0.05
ABCD4-221ENST00000554453 SLC15A2Q16348 729 aa15.38■□□□□ 0.05
ABCD4-221ENST00000554453 STK32BQ9NY57 414 aa15.38■□□□□ 0.05
ABCD4-221ENST00000554453 NSD3Q9BZ95 1437 aa15.37■□□□□ 0.05
ABCD4-221ENST00000554453 RAPGEF4Q8WZA2 1011 aa15.37■□□□□ 0.05
ABCD4-221ENST00000554453 TATP17735 454 aaPredicted RBP15.36■□□□□ 0.05
ABCD4-221ENST00000554453 PRIM1P49642 420 aaKnown RBP15.36■□□□□ 0.05
ABCD4-221ENST00000554453 POLR3GLQ9BT43 218 aa15.36■□□□□ 0.05
ABCD4-221ENST00000554453 EMILIN1Q9Y6C2 1016 aa15.36■□□□□ 0.05
ABCD4-221ENST00000554453 RGPD2P0DJD1 1756 aa15.36■□□□□ 0.05
ABCD4-221ENST00000554453 FLT4P35916 1363 aa15.36■□□□□ 0.05
ABCD4-221ENST00000554453 FAM208AQ9UK61 1670 aaKnown RBP15.35■□□□□ 0.05
ABCD4-221ENST00000554453 USHBP1Q8N6Y0 703 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms