RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 SKOR1P84550 965 aa9.94□□□□□ -0.82
ATXN3-226ENST00000554350 NUTM1Q86Y26 1132 aa9.94□□□□□ -0.82
ATXN3-226ENST00000554350 SPIRE2Q8WWL2 714 aa9.94□□□□□ -0.82
ATXN3-226ENST00000554350 MRGPRX2Q96LB1 330 aa9.94□□□□□ -0.82
ATXN3-226ENST00000554350 DENND4BO75064 1496 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-226ENST00000554350 ZNF335Q9H4Z2 1342 aaPredicted RBP9.93□□□□□ -0.82
ATXN3-226ENST00000554350 RETREG3Q86VR2 466 aa9.93□□□□□ -0.82
ATXN3-226ENST00000554350 KRI1Q8N9T8 703 aaKnown RBP9.93□□□□□ -0.82
ATXN3-226ENST00000554350 ABCA9Q8IUA7 1624 aa9.93□□□□□ -0.82
ATXN3-226ENST00000554350 ZFYVE16Q7Z3T8 1539 aa9.92□□□□□ -0.82
ATXN3-226ENST00000554350 FDX1P10109 184 aa9.92□□□□□ -0.82
ATXN3-226ENST00000554350 SMCPP49901 116 aaPredicted RBP9.92□□□□□ -0.82
ATXN3-226ENST00000554350 ABCA8O94911 1581 aa9.92□□□□□ -0.82
ATXN3-226ENST00000554350 SIGLEC1Q9BZZ2 1709 aa9.91□□□□□ -0.82
ATXN3-226ENST00000554350 NDUFV2P19404 249 aa9.91□□□□□ -0.82
ATXN3-226ENST00000554350 PTCRAQ6ISU1 281 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-226ENST00000554350 GIGYF2Q6Y7W6 1299 aaKnown RBP9.91□□□□□ -0.82
ATXN3-226ENST00000554350 FAM9AQ8IZU1 332 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-226ENST00000554350 CCDC24Q8N4L8 307 aa9.91□□□□□ -0.82
ATXN3-226ENST00000554350 SNIP1Q8TAD8 396 aaKnown RBP9.91□□□□□ -0.82
ATXN3-226ENST00000554350 TTC24A2A3L6 582 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-226ENST00000554350 MOXD2PA6NHM9 499 aa9.9□□□□□ -0.82
ATXN3-226ENST00000554350 J3QL48 77 aa9.9□□□□□ -0.82
ATXN3-226ENST00000554350 EFCAB5A4FU69 1503 aa9.9□□□□□ -0.82
ATXN3-226ENST00000554350 TTLL12Q14166 644 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-226ENST00000554350 CTC1Q2NKJ3 1217 aa9.89□□□□□ -0.83
ATXN3-226ENST00000554350 RICTORQ6R327 1708 aa9.89□□□□□ -0.83
ATXN3-226ENST00000554350 AXIN1O15169 862 aa9.88□□□□□ -0.83
ATXN3-226ENST00000554350 WNT7BP56706 349 aa9.88□□□□□ -0.83
ATXN3-226ENST00000554350 RC3H1Q5TC82 1133 aaKnown RBP9.88□□□□□ -0.83
ATXN3-226ENST00000554350 NUDT12Q9BQG2 462 aa9.88□□□□□ -0.83
ATXN3-226ENST00000554350 ARHGEF12Q9NZN5 1544 aa9.87□□□□□ -0.83
ATXN3-226ENST00000554350 SETD1BQ9UPS6 1966 aaKnown RBP9.87□□□□□ -0.83
ATXN3-226ENST00000554350 TOM1O60784 492 aa9.87□□□□□ -0.83
ATXN3-226ENST00000554350 LCE2AQ5TA79 106 aaPredicted RBP9.87□□□□□ -0.83
ATXN3-226ENST00000554350 PARP9Q8IXQ6 854 aa9.87□□□□□ -0.83
ATXN3-226ENST00000554350 GMPR2Q9P2T1 348 aaKnown RBP9.87□□□□□ -0.83
ATXN3-226ENST00000554350 NCOA1Q15788 1441 aa9.87□□□□□ -0.83
ATXN3-226ENST00000554350 FHOD3Q2V2M9 1422 aa9.87□□□□□ -0.83
ATXN3-226ENST00000554350 C6orf229H3BNL8 230 aa9.86□□□□□ -0.83
ATXN3-226ENST00000554350 ESF1Q9H501 851 aaKnown RBP9.86□□□□□ -0.83
ATXN3-226ENST00000554350 ATP10BO94823 1461 aa9.85□□□□□ -0.83
ATXN3-226ENST00000554350 GOLGA3Q08378 1498 aa9.85□□□□□ -0.83
ATXN3-226ENST00000554350 SUPT5HO00267 1087 aaKnown RBP9.85□□□□□ -0.83
ATXN3-226ENST00000554350 TRIM66O15016 1216 aa9.85□□□□□ -0.83
ATXN3-226ENST00000554350 HPS1Q92902 700 aa9.85□□□□□ -0.83
ATXN3-226ENST00000554350 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
ATXN3-226ENST00000554350 ZMYM4Q5VZL5 1548 aa9.84□□□□□ -0.83
ATXN3-226ENST00000554350 MS4A1P11836 297 aa9.84□□□□□ -0.83
ATXN3-226ENST00000554350 SIAH2O43255 324 aa9.83□□□□□ -0.84
ATXN3-226ENST00000554350 MAGI2Q86UL8 1455 aa9.83□□□□□ -0.84
ATXN3-226ENST00000554350 CAMSAP1Q5T5Y3 1602 aa9.82□□□□□ -0.84
ATXN3-226ENST00000554350 HECW1Q76N89 1606 aa9.82□□□□□ -0.84
ATXN3-226ENST00000554350 CCNYL3P0C7X3 344 aa9.82□□□□□ -0.84
ATXN3-226ENST00000554350 PTPRNQ16849 979 aa9.82□□□□□ -0.84
ATXN3-226ENST00000554350 PRR7Q8TB68 274 aa9.82□□□□□ -0.84
ATXN3-226ENST00000554350 TBC1D2Q9BYX2 928 aa9.82□□□□□ -0.84
ATXN3-226ENST00000554350 RAPGEF2Q9Y4G8 1499 aa9.82□□□□□ -0.84
ATXN3-226ENST00000554350 CFAP74Q9C0B2 1584 aa9.82□□□□□ -0.84
ATXN3-226ENST00000554350 C9orf84Q5VXU9 1444 aa9.82□□□□□ -0.84
ATXN3-226ENST00000554350 ATP10AO60312 1499 aa9.81□□□□□ -0.84
ATXN3-226ENST00000554350 RSBN1LQ6PCB5 846 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-226ENST00000554350 EVA1BQ9NVM1 165 aa9.81□□□□□ -0.84
ATXN3-226ENST00000554350 GJA5P36382 358 aa9.8□□□□□ -0.84
ATXN3-226ENST00000554350 SH3BP2P78314 561 aa9.8□□□□□ -0.84
ATXN3-226ENST00000554350 MTMR2Q13614 643 aa9.8□□□□□ -0.84
ATXN3-226ENST00000554350 ATP13A2Q9NQ11 1180 aa9.8□□□□□ -0.84
ATXN3-226ENST00000554350 PCDHB15Q9Y5E8 787 aa9.8□□□□□ -0.84
ATXN3-226ENST00000554350 TRAPPC8Q9Y2L5 1435 aa9.8□□□□□ -0.84
ATXN3-226ENST00000554350 DESI1Q6ICB0 168 aa9.79□□□□□ -0.84
ATXN3-226ENST00000554350 TREML4Q6UXN2 200 aa9.79□□□□□ -0.84
ATXN3-226ENST00000554350 RGS17Q9UGC6 210 aaPredicted RBP9.79□□□□□ -0.84
ATXN3-226ENST00000554350 C3P01024 1663 aa9.79□□□□□ -0.84
ATXN3-226ENST00000554350 C11orf95C9JLR9 678 aaPredicted RBP9.78□□□□□ -0.84
ATXN3-226ENST00000554350 SPTLC1O15269 473 aa9.78□□□□□ -0.84
ATXN3-226ENST00000554350 AK7Q96M32 723 aa9.78□□□□□ -0.84
ATXN3-226ENST00000554350 UNC93B1Q9H1C4 597 aa9.78□□□□□ -0.84
ATXN3-226ENST00000554350 ALDH1A1P00352 501 aa9.77□□□□□ -0.85
ATXN3-226ENST00000554350 KCNH2Q12809 1159 aa9.77□□□□□ -0.85
ATXN3-226ENST00000554350 CTTNBP2Q8WZ74 1663 aa9.77□□□□□ -0.85
ATXN3-226ENST00000554350 SCAPERQ9BY12 1400 aa9.76□□□□□ -0.85
ATXN3-226ENST00000554350 SPDYE5A6NIY4 337 aa9.76□□□□□ -0.85
ATXN3-226ENST00000554350 CFAP99D6REC4 459 aa9.76□□□□□ -0.85
ATXN3-226ENST00000554350 SNRPBP14678 240 aaKnown RBP9.76□□□□□ -0.85
ATXN3-226ENST00000554350 POTEAQ6S8J7 498 aa9.75□□□□□ -0.85
ATXN3-226ENST00000554350 EHBP1Q8NDI1 1231 aa9.75□□□□□ -0.85
ATXN3-226ENST00000554350 BAP1Q92560 729 aa9.75□□□□□ -0.85
ATXN3-226ENST00000554350 PLEKHD1A6NEE1 506 aa9.74□□□□□ -0.85
ATXN3-226ENST00000554350 HRCP23327 699 aa9.74□□□□□ -0.85
ATXN3-226ENST00000554350 LINC01559Q495D7 138 aa9.74□□□□□ -0.85
ATXN3-226ENST00000554350 LYPD8Q6UX82 237 aa9.74□□□□□ -0.85
ATXN3-226ENST00000554350 TRIM47Q96LD4 638 aa9.74□□□□□ -0.85
ATXN3-226ENST00000554350 SETD1AO15047 1707 aaKnown RBP9.73□□□□□ -0.85
ATXN3-226ENST00000554350 PDE4DQ08499 809 aa9.73□□□□□ -0.85
ATXN3-226ENST00000554350 NFX1Q12986 1120 aaKnown RBP9.73□□□□□ -0.85
ATXN3-226ENST00000554350 LCE2CQ5TA81 110 aa9.73□□□□□ -0.85
ATXN3-226ENST00000554350 PTPRKQ15262 1439 aa9.73□□□□□ -0.85
ATXN3-226ENST00000554350 DIXDC1Q155Q3 683 aa9.72□□□□□ -0.85
ATXN3-226ENST00000554350 RIC3Q7Z5B4 369 aa9.72□□□□□ -0.85
ATXN3-226ENST00000554350 ZNF511Q8NB15 262 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms