RNA–Protein interactions for RNA: ENST00000554303.1

RPGRIP1-205, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-205ENST00000554303 SCARF1Q14162 830 aa4.34□□□□□ -1.71
RPGRIP1-205ENST00000554303 C6orf118Q5T5N4 469 aa4.34□□□□□ -1.71
RPGRIP1-205ENST00000554303 NBPF14Q5TI25 921 aa4.34□□□□□ -1.71
RPGRIP1-205ENST00000554303 VASH1Q7L8A9 365 aaPredicted RBP4.34□□□□□ -1.71
RPGRIP1-205ENST00000554303 NPAS3Q8IXF0 933 aa4.34□□□□□ -1.71
RPGRIP1-205ENST00000554303 GPKOWQ92917 476 aaPredicted RBP eCLIP4.34□□□□□ -1.71
RPGRIP1-205ENST00000554303 HMX1Q9NP08 348 aaPredicted RBP4.34□□□□□ -1.71
RPGRIP1-205ENST00000554303 FKBPLQ9UIM3 349 aa4.34□□□□□ -1.71
RPGRIP1-205ENST00000554303 AP1G2O75843 785 aa4.33□□□□□ -1.72
RPGRIP1-205ENST00000554303 FSHRP23945 695 aa4.33□□□□□ -1.72
RPGRIP1-205ENST00000554303 MEIOBQ8N635 442 aa4.33□□□□□ -1.72
RPGRIP1-205ENST00000554303 SLC16A10Q8TF71 515 aa4.33□□□□□ -1.72
RPGRIP1-205ENST00000554303 SOS2Q07890 1332 aaPredicted RBP4.32□□□□□ -1.72
RPGRIP1-205ENST00000554303 RFC5P40937 340 aa4.32□□□□□ -1.72
RPGRIP1-205ENST00000554303 CBLBQ13191 982 aa4.32□□□□□ -1.72
RPGRIP1-205ENST00000554303 TMEM132AQ24JP5 1023 aa4.32□□□□□ -1.72
RPGRIP1-205ENST00000554303 PPP1R26Q5T8A7 1209 aaPredicted RBP4.32□□□□□ -1.72
RPGRIP1-205ENST00000554303 CCDC116Q8IYX3 515 aa4.32□□□□□ -1.72
RPGRIP1-205ENST00000554303 LINC00528Q8N1L1 170 aa4.32□□□□□ -1.72
RPGRIP1-205ENST00000554303 KCTD15Q96SI1 283 aaPredicted RBP4.32□□□□□ -1.72
RPGRIP1-205ENST00000554303 ARHGAP9Q9BRR9 750 aa4.32□□□□□ -1.72
RPGRIP1-205ENST00000554303 DNMT3LQ9UJW3 386 aa4.32□□□□□ -1.72
RPGRIP1-205ENST00000554303 CDK11AQ9UQ88 783 aaPredicted RBP4.32□□□□□ -1.72
RPGRIP1-205ENST00000554303 HMGB1P09429 215 aaKnown RBP4.31□□□□□ -1.72
RPGRIP1-205ENST00000554303 USP17L8P0C7I0 530 aa4.31□□□□□ -1.72
RPGRIP1-205ENST00000554303 BMP2P12643 396 aa4.31□□□□□ -1.72
RPGRIP1-205ENST00000554303 INSM1Q01101 510 aaPredicted RBP4.31□□□□□ -1.72
RPGRIP1-205ENST00000554303 Q6ZVU0 165 aa4.31□□□□□ -1.72
RPGRIP1-205ENST00000554303 ZBTB33Q86T24 672 aa4.31□□□□□ -1.72
RPGRIP1-205ENST00000554303 ADAM32Q8TC27 787 aa4.31□□□□□ -1.72
RPGRIP1-205ENST00000554303 IRF7Q92985 503 aa4.31□□□□□ -1.72
RPGRIP1-205ENST00000554303 TRIM34Q9BYJ4 488 aa4.31□□□□□ -1.72
RPGRIP1-205ENST00000554303 STK17AQ9UEE5 414 aa4.31□□□□□ -1.72
RPGRIP1-205ENST00000554303 ATP1B4Q9UN42 357 aaPredicted RBP4.31□□□□□ -1.72
RPGRIP1-205ENST00000554303 EMILIN1Q9Y6C2 1016 aa4.31□□□□□ -1.72
RPGRIP1-205ENST00000554303 MAN1A2O60476 641 aa4.3□□□□□ -1.72
RPGRIP1-205ENST00000554303 VSIG8P0DPA2 414 aa4.3□□□□□ -1.72
RPGRIP1-205ENST00000554303 INTS6LQ5JSJ4 861 aaKnown RBP4.3□□□□□ -1.72
RPGRIP1-205ENST00000554303 IL27Q8NEV9 243 aa4.3□□□□□ -1.72
RPGRIP1-205ENST00000554303 GOPCQ9HD26 462 aa4.3□□□□□ -1.72
RPGRIP1-205ENST00000554303 TMPRSS4Q9NRS4 437 aa4.3□□□□□ -1.72
RPGRIP1-205ENST00000554303 ZC3H4Q9UPT8 1303 aaKnown RBP4.29□□□□□ -1.72
RPGRIP1-205ENST00000554303 FIGNL2A6NMB9 653 aa4.29□□□□□ -1.72
RPGRIP1-205ENST00000554303 PPFIA3O75145 1194 aa4.29□□□□□ -1.72
RPGRIP1-205ENST00000554303 ADD1P35611 737 aaKnown RBP4.29□□□□□ -1.72
RPGRIP1-205ENST00000554303 PTK2Q05397 1052 aa4.29□□□□□ -1.72
RPGRIP1-205ENST00000554303 KDF1Q8NAX2 398 aaPredicted RBP4.29□□□□□ -1.72
RPGRIP1-205ENST00000554303 AGBL1Q96MI9 1066 aa4.29□□□□□ -1.72
RPGRIP1-205ENST00000554303 TSEN34Q9BSV6 310 aaKnown RBP4.29□□□□□ -1.72
RPGRIP1-205ENST00000554303 GPSM3Q9Y4H4 160 aa4.29□□□□□ -1.72
RPGRIP1-205ENST00000554303 SPINT1O43278 529 aa4.28□□□□□ -1.72
RPGRIP1-205ENST00000554303 BRPF1P55201 1214 aaPredicted RBP4.28□□□□□ -1.72
RPGRIP1-205ENST00000554303 GPR161Q8N6U8 529 aaKnown RBP4.28□□□□□ -1.72
RPGRIP1-205ENST00000554303 GJD4Q96KN9 370 aaPredicted RBP4.28□□□□□ -1.72
RPGRIP1-205ENST00000554303 TTLL8A6PVC2 850 aa4.27□□□□□ -1.73
RPGRIP1-205ENST00000554303 ESPNB1AK53 854 aa4.27□□□□□ -1.73
RPGRIP1-205ENST00000554303 LILRA1O75019 489 aa4.27□□□□□ -1.73
RPGRIP1-205ENST00000554303 UPP2O95045 317 aa4.27□□□□□ -1.73
RPGRIP1-205ENST00000554303 CTSOP43234 321 aaPredicted RBP4.27□□□□□ -1.73
RPGRIP1-205ENST00000554303 NEUROD2Q15784 382 aa4.27□□□□□ -1.73
RPGRIP1-205ENST00000554303 ZSCAN1Q8NBB4 408 aa4.27□□□□□ -1.73
RPGRIP1-205ENST00000554303 SLC10A4Q96EP9 437 aa4.27□□□□□ -1.73
RPGRIP1-205ENST00000554303 PGPEP1Q9NXJ5 209 aa4.27□□□□□ -1.73
RPGRIP1-205ENST00000554303 CDV3Q9UKY7 258 aaKnown RBP4.27□□□□□ -1.73
RPGRIP1-205ENST00000554303 ERVH48-1M5A8F1 160 aa4.26□□□□□ -1.73
RPGRIP1-205ENST00000554303 RELBQ01201 579 aa4.26□□□□□ -1.73
RPGRIP1-205ENST00000554303 KRT76Q01546 638 aa4.26□□□□□ -1.73
RPGRIP1-205ENST00000554303 PTSQ03393 145 aa4.26□□□□□ -1.73
RPGRIP1-205ENST00000554303 TMEM259Q4ZIN3 620 aa4.26□□□□□ -1.73
RPGRIP1-205ENST00000554303 C14orf37Q86TY3 774 aa4.26□□□□□ -1.73
RPGRIP1-205ENST00000554303 ZNF784Q8NCA9 323 aaPredicted RBP4.26□□□□□ -1.73
RPGRIP1-205ENST00000554303 PCMTD1Q96MG8 357 aaPredicted RBP4.26□□□□□ -1.73
RPGRIP1-205ENST00000554303 ZNF395Q9H8N7 513 aaPredicted RBP4.26□□□□□ -1.73
RPGRIP1-205ENST00000554303 SLC35F4A4IF30 521 aa4.25□□□□□ -1.73
RPGRIP1-205ENST00000554303 GPR37L1O60883 481 aa4.25□□□□□ -1.73
RPGRIP1-205ENST00000554303 RAB15P59190 212 aa4.25□□□□□ -1.73
RPGRIP1-205ENST00000554303 DHX9Q08211 1270 aaKnown RBP4.25□□□□□ -1.73
RPGRIP1-205ENST00000554303 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.25□□□□□ -1.73
RPGRIP1-205ENST00000554303 DZIP3Q86Y13 1208 aaKnown RBP4.25□□□□□ -1.73
RPGRIP1-205ENST00000554303 INSM2Q96T92 566 aaPredicted RBP4.25□□□□□ -1.73
RPGRIP1-205ENST00000554303 GIGYF1O75420 1035 aaPredicted RBP4.24□□□□□ -1.73
RPGRIP1-205ENST00000554303 FBXO45P0C2W1 286 aa4.24□□□□□ -1.73
RPGRIP1-205ENST00000554303 CCDC155Q8N6L0 562 aa4.24□□□□□ -1.73
RPGRIP1-205ENST00000554303 SENP3-EIF4A1A0A087X0R7 540 aa4.23□□□□□ -1.73
RPGRIP1-205ENST00000554303 ZBBXA8MT70 800 aa4.23□□□□□ -1.73
RPGRIP1-205ENST00000554303 PTGIRP43119 386 aa4.23□□□□□ -1.73
RPGRIP1-205ENST00000554303 NBPF20Q3BBV1 942 aa4.23□□□□□ -1.73
RPGRIP1-205ENST00000554303 FOXD4L5Q5VV16 416 aaPredicted RBP4.23□□□□□ -1.73
RPGRIP1-205ENST00000554303 RNF217Q8TC41 542 aa4.23□□□□□ -1.73
RPGRIP1-205ENST00000554303 NANOS1Q8WY41 292 aaKnown RBP4.23□□□□□ -1.73
RPGRIP1-205ENST00000554303 ADH1AP07327 375 aa4.22□□□□□ -1.73
RPGRIP1-205ENST00000554303 RNFT1Q5M7Z0 435 aa4.22□□□□□ -1.73
RPGRIP1-205ENST00000554303 BCL11AQ9H165 835 aa4.22□□□□□ -1.73
RPGRIP1-205ENST00000554303 SNRKQ9NRH2 765 aa4.22□□□□□ -1.73
RPGRIP1-205ENST00000554303 ITGA6P23229 1130 aa4.21□□□□□ -1.74
RPGRIP1-205ENST00000554303 SEPT12Q8IYM1 358 aa4.21□□□□□ -1.74
RPGRIP1-205ENST00000554303 VWA5B2Q8N398 1253 aa4.21□□□□□ -1.74
RPGRIP1-205ENST00000554303 MTMR14Q8NCE2 650 aa4.21□□□□□ -1.74
RPGRIP1-205ENST00000554303 PNMA1Q8ND90 353 aa4.21□□□□□ -1.74
RPGRIP1-205ENST00000554303 BANK1Q8NDB2 785 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms