RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 HDGFL2Q7Z4V5 671 aaPredicted RBP26.55■■□□□ 1.84
CPSF2-203ENST00000554290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.55■■□□□ 1.84
CPSF2-203ENST00000554290 CDCA7Q9BWT1 371 aaPredicted RBP26.55■■□□□ 1.84
CPSF2-203ENST00000554290 PARP4Q9UKK3 1724 aaKnown RBP26.55■■□□□ 1.84
CPSF2-203ENST00000554290 COL18A1P39060 1754 aa26.54■■□□□ 1.84
CPSF2-203ENST00000554290 CSB-PGBD3P0DP91 1061 aa26.54■■□□□ 1.84
CPSF2-203ENST00000554290 TRIM26Q12899 539 aaPredicted RBP26.54■■□□□ 1.84
CPSF2-203ENST00000554290 PUS7Q96PZ0 661 aaKnown RBP26.53■■□□□ 1.84
CPSF2-203ENST00000554290 OVOS2A0A0G2JMS6 1433 aa26.52■■□□□ 1.84
CPSF2-203ENST00000554290 OVOS2A0A0J9YW53 1432 aa26.52■■□□□ 1.84
CPSF2-203ENST00000554290 LRP5O75197 1615 aa26.52■■□□□ 1.84
CPSF2-203ENST00000554290 OVOS2Q6IE36 1432 aa26.52■■□□□ 1.84
CPSF2-203ENST00000554290 SLC12A5Q9H2X9 1139 aa26.52■■□□□ 1.84
CPSF2-203ENST00000554290 TERF2IPQ9NYB0 399 aa26.52■■□□□ 1.84
CPSF2-203ENST00000554290 USP31Q70CQ4 1352 aa26.51■■□□□ 1.83
CPSF2-203ENST00000554290 CARD10Q9BWT7 1032 aa26.51■■□□□ 1.83
CPSF2-203ENST00000554290 MON2Q7Z3U7 1717 aa26.5■■□□□ 1.83
CPSF2-203ENST00000554290 SLC24A1O60721 1099 aa26.49■■□□□ 1.83
CPSF2-203ENST00000554290 NME9Q86XW9 330 aa26.49■■□□□ 1.83
CPSF2-203ENST00000554290 NFAT5O94916 1531 aa26.49■■□□□ 1.83
CPSF2-203ENST00000554290 CD163L1Q9NR16 1453 aa26.49■■□□□ 1.83
CPSF2-203ENST00000554290 NBPF14Q5TI25 921 aa26.48■■□□□ 1.83
CPSF2-203ENST00000554290 EDC4Q6P2E9 1401 aaKnown RBP26.46■■□□□ 1.83
CPSF2-203ENST00000554290 ABCC6O95255 1503 aa26.45■■□□□ 1.83
CPSF2-203ENST00000554290 LRRC37A3O60309 1634 aa26.45■■□□□ 1.82
CPSF2-203ENST00000554290 CCDC7Q96M83 1385 aa26.45■■□□□ 1.82
CPSF2-203ENST00000554290 ST20-MTHFSA0A0A6YYL1 179 aa26.44■■□□□ 1.82
CPSF2-203ENST00000554290 EXOC5O00471 708 aa26.43■■□□□ 1.82
CPSF2-203ENST00000554290 MARCH10Q8NA82 808 aaPredicted RBP26.43■■□□□ 1.82
CPSF2-203ENST00000554290 TESK2Q96S53 571 aa26.42■■□□□ 1.82
CPSF2-203ENST00000554290 BCL11BQ9C0K0 894 aaPredicted RBP26.42■■□□□ 1.82
CPSF2-203ENST00000554290 A0A1W2PP64 1363 aa26.42■■□□□ 1.82
CPSF2-203ENST00000554290 PEAK1Q9H792 1746 aa26.42■■□□□ 1.82
CPSF2-203ENST00000554290 PLSCR1O15162 318 aa26.41■■□□□ 1.82
CPSF2-203ENST00000554290 NINLQ9Y2I6 1382 aa26.41■■□□□ 1.82
CPSF2-203ENST00000554290 RGPD5Q99666 1765 aa26.41■■□□□ 1.82
CPSF2-203ENST00000554290 RREB1Q92766 1687 aa26.4■■□□□ 1.82
CPSF2-203ENST00000554290 BCL9O00512 1426 aa26.39■■□□□ 1.82
CPSF2-203ENST00000554290 USP54Q70EL1 1684 aa26.39■■□□□ 1.82
CPSF2-203ENST00000554290 NLRP2Q9NX02 1062 aa26.39■■□□□ 1.82
CPSF2-203ENST00000554290 ERBB3P21860 1342 aa26.39■■□□□ 1.81
CPSF2-203ENST00000554290 WNK3Q9BYP7 1800 aa26.37■■□□□ 1.81
CPSF2-203ENST00000554290 NUP188Q5SRE5 1749 aa26.36■■□□□ 1.81
CPSF2-203ENST00000554290 ANKRD24Q8TF21 1146 aa26.35■■□□□ 1.81
CPSF2-203ENST00000554290 PTF1AQ7RTS3 328 aa26.33■■□□□ 1.81
CPSF2-203ENST00000554290 COG3Q96JB2 828 aa26.33■■□□□ 1.81
CPSF2-203ENST00000554290 SBF2Q86WG5 1849 aa26.32■■□□□ 1.8
CPSF2-203ENST00000554290 IL2RBP14784 551 aa26.32■■□□□ 1.8
CPSF2-203ENST00000554290 TMF1P82094 1093 aa26.32■■□□□ 1.8
CPSF2-203ENST00000554290 TNS2Q63HR2 1409 aa26.31■■□□□ 1.8
CPSF2-203ENST00000554290 IP6K1Q92551 441 aa26.31■■□□□ 1.8
CPSF2-203ENST00000554290 RGPD3A6NKT7 1758 aaPredicted RBP26.3■■□□□ 1.8
CPSF2-203ENST00000554290 RGPD4Q7Z3J3 1758 aa26.3■■□□□ 1.8
CPSF2-203ENST00000554290 LTN1O94822 1766 aa26.3■■□□□ 1.8
CPSF2-203ENST00000554290 USP47Q96K76 1375 aa26.28■■□□□ 1.8
CPSF2-203ENST00000554290 SPON1Q9HCB6 807 aa26.27■■□□□ 1.8
CPSF2-203ENST00000554290 ANKRD36BQ8N2N9 1353 aa26.27■■□□□ 1.8
CPSF2-203ENST00000554290 CDCA8Q53HL2 280 aa26.26■■□□□ 1.79
CPSF2-203ENST00000554290 PROM2Q8N271 834 aa26.26■■□□□ 1.79
CPSF2-203ENST00000554290 KCNQ2O43526 872 aa26.25■■□□□ 1.79
CPSF2-203ENST00000554290 AMPHP49418 695 aa26.24■■□□□ 1.79
CPSF2-203ENST00000554290 TXNRD1Q16881 649 aa26.24■■□□□ 1.79
CPSF2-203ENST00000554290 LTV1Q96GA3 475 aaPredicted RBP26.24■■□□□ 1.79
CPSF2-203ENST00000554290 TIMELESSQ9UNS1 1208 aa26.24■■□□□ 1.79
CPSF2-203ENST00000554290 MAP3K19Q56UN5 1328 aa26.23■■□□□ 1.79
CPSF2-203ENST00000554290 ANO8Q9HCE9 1232 aaPredicted RBP26.23■■□□□ 1.79
CPSF2-203ENST00000554290 ACSBG1Q96GR2 724 aa26.22■■□□□ 1.79
CPSF2-203ENST00000554290 PPP1R1BQ9UD71 204 aaPredicted RBP26.22■■□□□ 1.79
CPSF2-203ENST00000554290 HOXC9P31274 260 aa26.21■■□□□ 1.79
CPSF2-203ENST00000554290 STK32BQ9NY57 414 aa26.2■■□□□ 1.78
CPSF2-203ENST00000554290 FYB1O15117 783 aa26.19■■□□□ 1.78
CPSF2-203ENST00000554290 FBLN1P23142 703 aa26.17■■□□□ 1.78
CPSF2-203ENST00000554290 GGNBP2Q9H3C7 697 aa26.17■■□□□ 1.78
CPSF2-203ENST00000554290 CLSPNQ9HAW4 1339 aa26.16■■□□□ 1.78
CPSF2-203ENST00000554290 DDX54Q8TDD1 881 aaKnown RBP26.16■■□□□ 1.78
CPSF2-203ENST00000554290 NHSQ6T4R5 1651 aa26.15■■□□□ 1.78
CPSF2-203ENST00000554290 FAM208AQ9UK61 1670 aaKnown RBP26.15■■□□□ 1.78
CPSF2-203ENST00000554290 SLC15A2Q16348 729 aa26.15■■□□□ 1.78
CPSF2-203ENST00000554290 RTL1A6NKG5 1358 aa26.15■■□□□ 1.78
CPSF2-203ENST00000554290 PCGF6Q9BYE7 350 aa26.14■■□□□ 1.78
CPSF2-203ENST00000554290 RRS1Q15050 365 aaKnown RBP26.13■■□□□ 1.77
CPSF2-203ENST00000554290 PDGFDQ9GZP0 370 aaPredicted RBP26.1■■□□□ 1.77
CPSF2-203ENST00000554290 ZBTB7AO95365 584 aa26.09■■□□□ 1.77
CPSF2-203ENST00000554290 ZCRB1Q8TBF4 217 aaKnown RBP26.09■■□□□ 1.77
CPSF2-203ENST00000554290 CASZ1Q86V15 1759 aa26.08■■□□□ 1.77
CPSF2-203ENST00000554290 SMG6Q86US8 1419 aaKnown RBP26.08■■□□□ 1.77
CPSF2-203ENST00000554290 DCAF8L1A6NGE4 600 aa26.08■■□□□ 1.77
CPSF2-203ENST00000554290 NBPF6Q5VWK0 638 aa26.07■■□□□ 1.76
CPSF2-203ENST00000554290 NBPF4Q96M43 638 aa26.07■■□□□ 1.76
CPSF2-203ENST00000554290 RAPGEF4Q8WZA2 1011 aa26.05■■□□□ 1.76
CPSF2-203ENST00000554290 SYTL4Q96C24 671 aaPredicted RBP26.05■■□□□ 1.76
CPSF2-203ENST00000554290 CARD14Q9BXL6 1004 aa26.05■■□□□ 1.76
CPSF2-203ENST00000554290 ATF5Q9Y2D1 282 aaPredicted RBP26.05■■□□□ 1.76
CPSF2-203ENST00000554290 CGNL1Q0VF96 1302 aa26.05■■□□□ 1.76
CPSF2-203ENST00000554290 BTAF1O14981 1849 aa26.04■■□□□ 1.76
CPSF2-203ENST00000554290 INSRP06213 1382 aa26.04■■□□□ 1.76
CPSF2-203ENST00000554290 KIF24Q5T7B8 1368 aa26.04■■□□□ 1.76
CPSF2-203ENST00000554290 PRIM1P49642 420 aaKnown RBP26.03■■□□□ 1.76
CPSF2-203ENST00000554290 SLC27A3Q5K4L6 730 aa26.03■■□□□ 1.76
CPSF2-203ENST00000554290 MTFR1LQ9H019 292 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms