RNA–Protein interactions for RNA: ENST00000554207.1

PSMA3-205, Transcript of proteasome subunit alpha 3, humanhuman

TSL 2

Gene PSMA3, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA3-205ENST00000554207 SKOR1P84550 965 aa9.9□□□□□ -0.82
PSMA3-205ENST00000554207 TFIP11Q9UBB9 837 aaKnown RBP9.9□□□□□ -0.82
PSMA3-205ENST00000554207 GPSM3Q9Y4H4 160 aa9.9□□□□□ -0.82
PSMA3-205ENST00000554207 SOX11P35716 441 aa9.89□□□□□ -0.83
PSMA3-205ENST00000554207 TRIM32Q13049 653 aa9.89□□□□□ -0.83
PSMA3-205ENST00000554207 AGERQ15109 404 aa9.89□□□□□ -0.83
PSMA3-205ENST00000554207 CYP4X1Q8N118 509 aa9.89□□□□□ -0.83
PSMA3-205ENST00000554207 FAM174AQ8TBP5 190 aa9.89□□□□□ -0.83
PSMA3-205ENST00000554207 TOR4AQ9NXH8 423 aa9.89□□□□□ -0.83
PSMA3-205ENST00000554207 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.88□□□□□ -0.83
PSMA3-205ENST00000554207 LCE2AQ5TA79 106 aaPredicted RBP9.88□□□□□ -0.83
PSMA3-205ENST00000554207 ZBTB33Q86T24 672 aa9.88□□□□□ -0.83
PSMA3-205ENST00000554207 ERFEQ4G0M1 354 aa9.87□□□□□ -0.83
PSMA3-205ENST00000554207 ST8SIA5O15466 376 aa9.86□□□□□ -0.83
PSMA3-205ENST00000554207 LMOD1P29536 600 aaPredicted RBP9.86□□□□□ -0.83
PSMA3-205ENST00000554207 AAASQ9NRG9 546 aa9.86□□□□□ -0.83
PSMA3-205ENST00000554207 CEP126Q9P2H0 1117 aa9.86□□□□□ -0.83
PSMA3-205ENST00000554207 TSGA10IPQ3SY00 556 aa9.85□□□□□ -0.83
PSMA3-205ENST00000554207 CDCA8Q53HL2 280 aa9.85□□□□□ -0.83
PSMA3-205ENST00000554207 BPHLQ86WA6 291 aaPredicted RBP9.85□□□□□ -0.83
PSMA3-205ENST00000554207 MAFBQ9Y5Q3 323 aaPredicted RBP9.85□□□□□ -0.83
PSMA3-205ENST00000554207 TTC24A2A3L6 582 aaPredicted RBP9.84□□□□□ -0.83
PSMA3-205ENST00000554207 DEPDC4Q8N2C3 294 aa9.84□□□□□ -0.83
PSMA3-205ENST00000554207 WNT7AO00755 349 aa9.83□□□□□ -0.84
PSMA3-205ENST00000554207 SRPK2P78362 688 aaKnown RBP9.83□□□□□ -0.84
PSMA3-205ENST00000554207 INSM1Q01101 510 aaPredicted RBP9.83□□□□□ -0.84
PSMA3-205ENST00000554207 DZIP3Q86Y13 1208 aaKnown RBP9.83□□□□□ -0.84
PSMA3-205ENST00000554207 C1QTNF2Q9BXJ5 285 aa9.83□□□□□ -0.84
PSMA3-205ENST00000554207 ATP9BO43861 1147 aa9.82□□□□□ -0.84
PSMA3-205ENST00000554207 GIGYF1O75420 1035 aaPredicted RBP9.82□□□□□ -0.84
PSMA3-205ENST00000554207 WFS1O76024 890 aa9.82□□□□□ -0.84
PSMA3-205ENST00000554207 SKIP12755 728 aa9.82□□□□□ -0.84
PSMA3-205ENST00000554207 PHTF2Q8N3S3 785 aa9.82□□□□□ -0.84
PSMA3-205ENST00000554207 AVPP01185 164 aa9.81□□□□□ -0.84
PSMA3-205ENST00000554207 SNIP1Q8TAD8 396 aaKnown RBP9.81□□□□□ -0.84
PSMA3-205ENST00000554207 RNF135Q8IUD6 432 aa9.8□□□□□ -0.84
PSMA3-205ENST00000554207 MRGPRX2Q96LB1 330 aa9.8□□□□□ -0.84
PSMA3-205ENST00000554207 CCDC85AQ96PX6 553 aaPredicted RBP9.8□□□□□ -0.84
PSMA3-205ENST00000554207 USP17L5A8MUK1 530 aa9.79□□□□□ -0.84
PSMA3-205ENST00000554207 SLFNL1Q499Z3 407 aa9.79□□□□□ -0.84
PSMA3-205ENST00000554207 CRIPAKQ8N1N5 446 aa9.79□□□□□ -0.84
PSMA3-205ENST00000554207 PBXIP1Q96AQ6 731 aa9.79□□□□□ -0.84
PSMA3-205ENST00000554207 SLC10A4Q96EP9 437 aa9.79□□□□□ -0.84
PSMA3-205ENST00000554207 DACH1Q9UI36 760 aa9.79□□□□□ -0.84
PSMA3-205ENST00000554207 CARNS1A5YM72 827 aa9.78□□□□□ -0.84
PSMA3-205ENST00000554207 USP17L3A6NCW0 530 aa9.78□□□□□ -0.84
PSMA3-205ENST00000554207 USP17L4A6NCW7 530 aa9.78□□□□□ -0.84
PSMA3-205ENST00000554207 AXIN1O15169 862 aa9.78□□□□□ -0.84
PSMA3-205ENST00000554207 SMPD1P17405 629 aa9.78□□□□□ -0.84
PSMA3-205ENST00000554207 RAB15P59190 212 aa9.78□□□□□ -0.84
PSMA3-205ENST00000554207 RC3H1Q5TC82 1133 aaKnown RBP9.78□□□□□ -0.84
PSMA3-205ENST00000554207 USP17L2Q6R6M4 530 aa9.78□□□□□ -0.84
PSMA3-205ENST00000554207 USP17L1Q7RTZ2 530 aa9.78□□□□□ -0.84
PSMA3-205ENST00000554207 RETREG2Q8NC44 543 aa9.78□□□□□ -0.84
PSMA3-205ENST00000554207 TLL2Q9Y6L7 1015 aa9.78□□□□□ -0.84
PSMA3-205ENST00000554207 WNT7BP56706 349 aa9.77□□□□□ -0.85
PSMA3-205ENST00000554207 NCOA4Q13772 614 aa9.77□□□□□ -0.85
PSMA3-205ENST00000554207 KANK4Q5T7N3 995 aaPredicted RBP9.77□□□□□ -0.85
PSMA3-205ENST00000554207 PLPP7Q8NBV4 271 aa9.77□□□□□ -0.85
PSMA3-205ENST00000554207 J3QL48 77 aa9.76□□□□□ -0.85
PSMA3-205ENST00000554207 CTC1Q2NKJ3 1217 aa9.76□□□□□ -0.85
PSMA3-205ENST00000554207 TRMT44Q8IYL2 757 aaKnown RBP9.76□□□□□ -0.85
PSMA3-205ENST00000554207 EHBP1Q8NDI1 1231 aa9.76□□□□□ -0.85
PSMA3-205ENST00000554207 CDCA7Q9BWT1 371 aaPredicted RBP9.76□□□□□ -0.85
PSMA3-205ENST00000554207 WIPF1O43516 503 aa9.75□□□□□ -0.85
PSMA3-205ENST00000554207 SMCPP49901 116 aaPredicted RBP9.75□□□□□ -0.85
PSMA3-205ENST00000554207 ARID5BQ14865 1188 aa9.75□□□□□ -0.85
PSMA3-205ENST00000554207 NFATC2IPQ8NCF5 419 aa9.75□□□□□ -0.85
PSMA3-205ENST00000554207 CHIC2Q9UKJ5 165 aa9.75□□□□□ -0.85
PSMA3-205ENST00000554207 ESPNB1AK53 854 aa9.74□□□□□ -0.85
PSMA3-205ENST00000554207 VARSP26640 1264 aaKnown RBP9.74□□□□□ -0.85
PSMA3-205ENST00000554207 MCCD1P59942 119 aaPredicted RBP9.74□□□□□ -0.85
PSMA3-205ENST00000554207 SIAH2O43255 324 aa9.73□□□□□ -0.85
PSMA3-205ENST00000554207 KCTD15Q96SI1 283 aaPredicted RBP9.73□□□□□ -0.85
PSMA3-205ENST00000554207 PPP1R15AO75807 674 aaPredicted RBP9.72□□□□□ -0.85
PSMA3-205ENST00000554207 OXLD1Q5BKU9 147 aa9.72□□□□□ -0.85
PSMA3-205ENST00000554207 INTS6LQ5JSJ4 861 aaKnown RBP9.72□□□□□ -0.85
PSMA3-205ENST00000554207 VASH1Q7L8A9 365 aaPredicted RBP9.72□□□□□ -0.85
PSMA3-205ENST00000554207 PLEKHM2Q8IWE5 1019 aa9.72□□□□□ -0.85
PSMA3-205ENST00000554207 GMPR2Q9P2T1 348 aaKnown RBP9.72□□□□□ -0.85
PSMA3-205ENST00000554207 LOC100996750A0A140TA64 210 aa9.71□□□□□ -0.86
PSMA3-205ENST00000554207 NBPF20Q3BBV1 942 aa9.71□□□□□ -0.86
PSMA3-205ENST00000554207 CRTC2Q53ET0 693 aaPredicted RBP9.71□□□□□ -0.86
PSMA3-205ENST00000554207 KRTAP4-6Q9BYQ5 205 aa9.71□□□□□ -0.86
PSMA3-205ENST00000554207 VRTNQ9H8Y1 702 aa9.71□□□□□ -0.86
PSMA3-205ENST00000554207 MKRN1Q9UHC7 482 aaKnown RBP9.71□□□□□ -0.86
PSMA3-205ENST00000554207 DOLKQ9UPQ8 538 aa9.71□□□□□ -0.86
PSMA3-205ENST00000554207 PCDHB11Q9Y5F2 797 aa9.71□□□□□ -0.86
PSMA3-205ENST00000554207 FSHRP23945 695 aa9.7□□□□□ -0.86
PSMA3-205ENST00000554207 GRM5P41594 1212 aa9.7□□□□□ -0.86
PSMA3-205ENST00000554207 HPS1Q92902 700 aa9.7□□□□□ -0.86
PSMA3-205ENST00000554207 C11orf95C9JLR9 678 aaPredicted RBP9.69□□□□□ -0.86
PSMA3-205ENST00000554207 ZNF592Q92610 1267 aa9.69□□□□□ -0.86
PSMA3-205ENST00000554207 ZMIZ1Q9ULJ6 1067 aa9.69□□□□□ -0.86
PSMA3-205ENST00000554207 ERVH48-1M5A8F1 160 aa9.68□□□□□ -0.86
PSMA3-205ENST00000554207 ALDH1A1P00352 501 aa9.68□□□□□ -0.86
PSMA3-205ENST00000554207 SCTRP47872 440 aa9.68□□□□□ -0.86
PSMA3-205ENST00000554207 CLDN10P78369 228 aa9.68□□□□□ -0.86
PSMA3-205ENST00000554207 STK32AQ8WU08 396 aa9.68□□□□□ -0.86
PSMA3-205ENST00000554207 CDK15Q96Q40 435 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms