RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 LRRC7Q96NW7 1537 aa15.19■□□□□ 0.02
SPTB-206ENST00000553938 TRAK2O60296 914 aa15.19■□□□□ 0.02
SPTB-206ENST00000553938 NGEFQ8N5V2 710 aa15.19■□□□□ 0.02
SPTB-206ENST00000553938 DNAJC5Q9H3Z4 198 aa15.19■□□□□ 0.02
SPTB-206ENST00000553938 DDX19BQ9UMR2 479 aa15.19■□□□□ 0.02
SPTB-206ENST00000553938 HECW2Q9P2P5 1572 aa15.19■□□□□ 0.02
SPTB-206ENST00000553938 PPIP5K1Q6PFW1 1433 aa15.19■□□□□ 0.02
SPTB-206ENST00000553938 LMTK2Q8IWU2 1503 aa15.18■□□□□ 0.02
SPTB-206ENST00000553938 SOX12O15370 315 aa15.18■□□□□ 0.02
SPTB-206ENST00000553938 HDAC1Q13547 482 aaPredicted RBP15.18■□□□□ 0.02
SPTB-206ENST00000553938 C8orf58Q8NAV2 365 aa15.18■□□□□ 0.02
SPTB-206ENST00000553938 NEURL4Q96JN8 1562 aa15.18■□□□□ 0.02
SPTB-206ENST00000553938 PIK3C2BO00750 1634 aa15.18■□□□□ 0.02
SPTB-206ENST00000553938 PTPRMP28827 1452 aa15.18■□□□□ 0.02
SPTB-206ENST00000553938 MLECQ14165 292 aa15.18■□□□□ 0.02
SPTB-206ENST00000553938 NUCB1Q02818 461 aa15.17■□□□□ 0.02
SPTB-206ENST00000553938 CHD1LQ86WJ1 897 aa15.17■□□□□ 0.02
SPTB-206ENST00000553938 CYB5RLQ6IPT4 315 aa15.17■□□□□ 0.02
SPTB-206ENST00000553938 ZHX1Q9UKY1 873 aaPredicted RBP15.17■□□□□ 0.02
SPTB-206ENST00000553938 ERBB4Q15303 1308 aa15.17■□□□□ 0.02
SPTB-206ENST00000553938 USP32Q8NFA0 1604 aa15.16■□□□□ 0.02
SPTB-206ENST00000553938 TNPO1Q92973 898 aaKnown RBP15.16■□□□□ 0.02
SPTB-206ENST00000553938 MBIPQ9NS73 344 aa15.16■□□□□ 0.02
SPTB-206ENST00000553938 AEBP1Q8IUX7 1158 aa15.15■□□□□ 0.02
SPTB-206ENST00000553938 NAP1L2Q9ULW6 460 aaPredicted RBP15.15■□□□□ 0.02
SPTB-206ENST00000553938 ZBTB7BO15156 539 aaPredicted RBP15.15■□□□□ 0.02
SPTB-206ENST00000553938 CALD1Q05682 793 aaKnown RBP15.15■□□□□ 0.02
SPTB-206ENST00000553938 VAMP4O75379 141 aa15.15■□□□□ 0.02
SPTB-206ENST00000553938 TBC1D9Q6ZT07 1266 aa15.15■□□□□ 0.02
SPTB-206ENST00000553938 PKP1Q13835 747 aa15.14■□□□□ 0.01
SPTB-206ENST00000553938 SMARCA5O60264 1052 aaPredicted RBP15.14■□□□□ 0.01
SPTB-206ENST00000553938 FSD2A1L4K1 749 aa15.13■□□□□ 0.01
SPTB-206ENST00000553938 GOLGA6L3A6NEY3 463 aa15.13■□□□□ 0.01
SPTB-206ENST00000553938 NPM1P06748 294 aaKnown RBP eCLIP15.13■□□□□ 0.01
SPTB-206ENST00000553938 CLCN1P35523 988 aa15.13■□□□□ 0.01
SPTB-206ENST00000553938 MIS18AQ9NYP9 233 aa15.13■□□□□ 0.01
SPTB-206ENST00000553938 GSPT1P15170 499 aaKnown RBP15.13■□□□□ 0.01
SPTB-206ENST00000553938 HSCBQ8IWL3 235 aa15.13■□□□□ 0.01
SPTB-206ENST00000553938 GAS2L2Q8NHY3 880 aa15.13■□□□□ 0.01
SPTB-206ENST00000553938 CHMP5Q9NZZ3 219 aa15.13■□□□□ 0.01
SPTB-206ENST00000553938 YTHDC2Q9H6S0 1430 aaKnown RBP15.12■□□□□ 0.01
SPTB-206ENST00000553938 SSFA2P28290 1259 aa15.12■□□□□ 0.01
SPTB-206ENST00000553938 MRPL50Q8N5N7 158 aaKnown RBP15.12■□□□□ 0.01
SPTB-206ENST00000553938 PDCL3Q9H2J4 239 aa15.12■□□□□ 0.01
SPTB-206ENST00000553938 TSHZ3Q63HK5 1081 aa15.12■□□□□ 0.01
SPTB-206ENST00000553938 MAP2P11137 1827 aaKnown RBP15.12■□□□□ 0.01
SPTB-206ENST00000553938 DDIT3P35638 169 aa15.11■□□□□ 0.01
SPTB-206ENST00000553938 TERF2IPQ9NYB0 399 aa15.11■□□□□ 0.01
SPTB-206ENST00000553938 MED14O60244 1454 aa15.11■□□□□ 0.01
SPTB-206ENST00000553938 RPGRIP1LQ68CZ1 1315 aa15.1■□□□□ 0.01
SPTB-206ENST00000553938 TXNDC2Q86VQ3 553 aa15.1■□□□□ 0.01
SPTB-206ENST00000553938 STAG3Q9UJ98 1225 aa15.1■□□□□ 0.01
SPTB-206ENST00000553938 HSP90AB1P08238 724 aaKnown RBP15.1■□□□□ 0.01
SPTB-206ENST00000553938 KNDC1Q76NI1 1749 aa15.09■□□□□ 0.01
SPTB-206ENST00000553938 PRDM10Q9NQV6 1147 aa15.09■□□□□ 0.01
SPTB-206ENST00000553938 MLH3Q9UHC1 1453 aa15.09■□□□□ 0.01
SPTB-206ENST00000553938 DTNBO60941 627 aa15.09■□□□□ 0.01
SPTB-206ENST00000553938 GTF2E1P29083 439 aaPredicted RBP15.09■□□□□ 0.01
SPTB-206ENST00000553938 MCM10Q7L590 875 aa15.09■□□□□ 0.01
SPTB-206ENST00000553938 DIP2CQ9Y2E4 1556 aa15.09■□□□□ 0.01
SPTB-206ENST00000553938 NSD2O96028 1365 aa15.09■□□□□ 0.01
SPTB-206ENST00000553938 FOXD4L5Q5VV16 416 aaPredicted RBP15.08■□□□□ 0.01
SPTB-206ENST00000553938 FOXD4L4Q8WXT5 416 aaPredicted RBP15.08■□□□□ 0.01
SPTB-206ENST00000553938 TWISTNBQ3B726 338 aaPredicted RBP15.08■□□□□ 0
SPTB-206ENST00000553938 HDGFL2Q7Z4V5 671 aaPredicted RBP15.08■□□□□ 0
SPTB-206ENST00000553938 KIF16BQ96L93 1317 aa15.08■□□□□ 0
SPTB-206ENST00000553938 FAM135BQ49AJ0 1406 aa15.08■□□□□ 0
SPTB-206ENST00000553938 PNPLA6Q8IY17 1366 aa15.08■□□□□ 0
SPTB-206ENST00000553938 RBM25P49756 843 aaKnown RBP15.07■□□□□ 0
SPTB-206ENST00000553938 CNKSR2Q8WXI2 1034 aa15.07■□□□□ 0
SPTB-206ENST00000553938 NFE2L2Q16236 605 aa15.07■□□□□ 0
SPTB-206ENST00000553938 ARHGEF40Q8TER5 1519 aa15.06■□□□□ 0
SPTB-206ENST00000553938 IL13P35225 146 aa15.06■□□□□ 0
SPTB-206ENST00000553938 L1TD1Q5T7N2 865 aaKnown RBP15.06■□□□□ 0
SPTB-206ENST00000553938 GRPEL1Q9HAV7 217 aa15.06■□□□□ 0
SPTB-206ENST00000553938 DLG5Q8TDM6 1919 aa15.05■□□□□ 0
SPTB-206ENST00000553938 FOXO3O43524 673 aa15.05■□□□□ 0
SPTB-206ENST00000553938 FCHSD2O94868 740 aa15.05■□□□□ 0
SPTB-206ENST00000553938 TMEM131LA2VDJ0 1609 aa15.05■□□□□ 0
SPTB-206ENST00000553938 PLCD3Q8N3E9 789 aa15.05■□□□□ -0
SPTB-206ENST00000553938 NCOA3Q9Y6Q9 1424 aa15.05■□□□□ -0
SPTB-206ENST00000553938 IPO8O15397 1037 aaKnown RBP15.04■□□□□ -0
SPTB-206ENST00000553938 ALKQ9UM73 1620 aa15.04■□□□□ -0
SPTB-206ENST00000553938 CPS1P31327 1500 aa15.04■□□□□ -0
SPTB-206ENST00000553938 BMP2KLQ5H9B9 411 aa15.04■□□□□ -0
SPTB-206ENST00000553938 ZGPATQ8N5A5 531 aaKnown RBP15.04■□□□□ -0
SPTB-206ENST00000553938 F6X3S4 739 aa15.04■□□□□ -0
SPTB-206ENST00000553938 NECTIN2Q92692 538 aa15.04■□□□□ -0
SPTB-206ENST00000553938 CFAP74Q9C0B2 1584 aa15.04■□□□□ -0
SPTB-206ENST00000553938 PLEKHM2Q8IWE5 1019 aa15.03■□□□□ -0
SPTB-206ENST00000553938 CT47B1P0C2W7 299 aaPredicted RBP15.03■□□□□ -0
SPTB-206ENST00000553938 IL16Q14005 1332 aa15.03■□□□□ -0
SPTB-206ENST00000553938 MEIS3Q99687 375 aa15.02■□□□□ -0
SPTB-206ENST00000553938 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.02■□□□□ -04e-6■■■■□ 26
SPTB-206ENST00000553938 METP08581 1390 aa15.02■□□□□ -0
SPTB-206ENST00000553938 KIF20BQ96Q89 1820 aa15.02□□□□□ -0.01
SPTB-206ENST00000553938 RAB3GAP1Q15042 981 aa15.02□□□□□ -0.01
SPTB-206ENST00000553938 ALDH1L2Q3SY69 923 aa15.02□□□□□ -0.01
SPTB-206ENST00000553938 NOL8Q76FK4 1167 aaKnown RBP15.02□□□□□ -0.01
SPTB-206ENST00000553938 VGLL3A8MV65 326 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms