RNA–Protein interactions for RNA: ENST00000553807.1

XRCC3-205, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-205ENST00000553807 ONECUT3O60422 494 aaPredicted RBP28.38■■■□□ 2.13
XRCC3-205ENST00000553807 THSD7AQ9UPZ6 1657 aa28.36■■■□□ 2.13
XRCC3-205ENST00000553807 LTN1O94822 1766 aa28.34■■■□□ 2.13
XRCC3-205ENST00000553807 COG3Q96JB2 828 aa28.34■■■□□ 2.13
XRCC3-205ENST00000553807 AXIN2Q9Y2T1 843 aa28.34■■■□□ 2.13
XRCC3-205ENST00000553807 RGPD5Q99666 1765 aa28.33■■■□□ 2.13
XRCC3-205ENST00000553807 NSD3Q9BZ95 1437 aa28.33■■■□□ 2.13
XRCC3-205ENST00000553807 ABCC6O95255 1503 aa28.33■■■□□ 2.13
XRCC3-205ENST00000553807 EP400Q96L91 3159 aa28.32■■■□□ 2.12
XRCC3-205ENST00000553807 KIF20BQ96Q89 1820 aa28.32■■■□□ 2.12
XRCC3-205ENST00000553807 KRT27Q7Z3Y8 459 aa28.32■■■□□ 2.12
XRCC3-205ENST00000553807 CRB1P82279 1406 aa28.32■■■□□ 2.12
XRCC3-205ENST00000553807 TCP11L2Q8N4U5 519 aa28.3■■■□□ 2.12
XRCC3-205ENST00000553807 GGNBP2Q9H3C7 697 aa28.3■■■□□ 2.12
XRCC3-205ENST00000553807 CSB-PGBD3P0DP91 1061 aa28.29■■■□□ 2.12
XRCC3-205ENST00000553807 TOM1L2Q6ZVM7 507 aa28.29■■■□□ 2.12
XRCC3-205ENST00000553807 WDR17Q8IZU2 1322 aa28.28■■■□□ 2.12
XRCC3-205ENST00000553807 CARD14Q9BXL6 1004 aa28.28■■■□□ 2.12
XRCC3-205ENST00000553807 FYB1O15117 783 aa28.27■■■□□ 2.12
XRCC3-205ENST00000553807 BARGINQ6ZT62 677 aa28.27■■■□□ 2.12
XRCC3-205ENST00000553807 C11orf95C9JLR9 678 aaPredicted RBP28.24■■■□□ 2.11
XRCC3-205ENST00000553807 THRAP3Q9Y2W1 955 aaKnown RBP28.24■■■□□ 2.11
XRCC3-205ENST00000553807 FBLN1P23142 703 aa28.21■■■□□ 2.11
XRCC3-205ENST00000553807 FAM182BQ5T319 152 aa28.21■■■□□ 2.11
XRCC3-205ENST00000553807 MAP3K19Q56UN5 1328 aa28.2■■■□□ 2.11
XRCC3-205ENST00000553807 WNK3Q9BYP7 1800 aa28.2■■■□□ 2.11
XRCC3-205ENST00000553807 ERBB3P21860 1342 aa28.19■■■□□ 2.1
XRCC3-205ENST00000553807 PARP4Q9UKK3 1724 aaKnown RBP28.19■■■□□ 2.1
XRCC3-205ENST00000553807 CGNL1Q0VF96 1302 aa28.18■■■□□ 2.1
XRCC3-205ENST00000553807 BLMP54132 1417 aaPredicted RBP28.18■■■□□ 2.1
XRCC3-205ENST00000553807 ANKRD24Q8TF21 1146 aa28.18■■■□□ 2.1
XRCC3-205ENST00000553807 KIF7Q2M1P5 1343 aa28.18■■■□□ 2.1
XRCC3-205ENST00000553807 AMPHP49418 695 aa28.17■■■□□ 2.1
XRCC3-205ENST00000553807 RRS1Q15050 365 aaKnown RBP28.17■■■□□ 2.1
XRCC3-205ENST00000553807 CARD10Q9BWT7 1032 aa28.17■■■□□ 2.1
XRCC3-205ENST00000553807 PANK3Q9H999 370 aa28.17■■■□□ 2.1
XRCC3-205ENST00000553807 LRRC37A3O60309 1634 aa28.17■■■□□ 2.1
XRCC3-205ENST00000553807 PDE3BQ13370 1112 aa28.16■■■□□ 2.1
XRCC3-205ENST00000553807 IP6K1Q92551 441 aa28.16■■■□□ 2.1
XRCC3-205ENST00000553807 CCDC125Q86Z20 511 aa28.15■■■□□ 2.1
XRCC3-205ENST00000553807 LTV1Q96GA3 475 aaPredicted RBP28.15■■■□□ 2.1
XRCC3-205ENST00000553807 NLRP2Q9NX02 1062 aa28.15■■■□□ 2.1
XRCC3-205ENST00000553807 CCDC7Q96M83 1385 aa28.14■■■□□ 2.1
XRCC3-205ENST00000553807 RTL1A6NKG5 1358 aa28.13■■■□□ 2.09
XRCC3-205ENST00000553807 HOXC9P31274 260 aa28.13■■■□□ 2.09
XRCC3-205ENST00000553807 SF3B2Q13435 895 aaKnown RBP28.12■■■□□ 2.09
XRCC3-205ENST00000553807 DISP2A7MBM2 1401 aa28.1■■■□□ 2.09
XRCC3-205ENST00000553807 FAM208AQ9UK61 1670 aaKnown RBP28.1■■■□□ 2.09
XRCC3-205ENST00000553807 ANKRD26Q9UPS8 1709 aa28.1■■■□□ 2.09
XRCC3-205ENST00000553807 DDB1Q16531 1140 aa28.1■■■□□ 2.09
XRCC3-205ENST00000553807 CDCA7Q9BWT1 371 aaPredicted RBP28.09■■■□□ 2.09
XRCC3-205ENST00000553807 RGPD1P0DJD0 1748 aa28.09■■■□□ 2.09
XRCC3-205ENST00000553807 PEAK1Q9H792 1746 aa28.09■■■□□ 2.09
XRCC3-205ENST00000553807 FAM196AQ6ZSG2 479 aa28.08■■■□□ 2.09
XRCC3-205ENST00000553807 DEFB132Q7Z7B7 95 aa28.06■■■□□ 2.08
XRCC3-205ENST00000553807 FLT4P35916 1363 aa28.05■■■□□ 2.08
XRCC3-205ENST00000553807 TNS1Q9HBL0 1735 aaKnown RBP28.04■■■□□ 2.08
XRCC3-205ENST00000553807 SMG6Q86US8 1419 aaKnown RBP28.04■■■□□ 2.08
XRCC3-205ENST00000553807 EMILIN1Q9Y6C2 1016 aa28.04■■■□□ 2.08
XRCC3-205ENST00000553807 OVOS2A0A0G2JMS6 1433 aa28.03■■■□□ 2.08
XRCC3-205ENST00000553807 TNNT2P45379 298 aaPredicted RBP28.03■■■□□ 2.08
XRCC3-205ENST00000553807 TNS2Q63HR2 1409 aa28.02■■■□□ 2.08
XRCC3-205ENST00000553807 NSD2O96028 1365 aa28.02■■■□□ 2.08
XRCC3-205ENST00000553807 PPM1GO15355 546 aaPredicted RBP28.02■■■□□ 2.08
XRCC3-205ENST00000553807 TRIM37O94972 964 aa28.02■■■□□ 2.08
XRCC3-205ENST00000553807 KNSTRNQ9Y448 316 aa28.02■■■□□ 2.08
XRCC3-205ENST00000553807 RGPD2P0DJD1 1756 aa28.01■■■□□ 2.08
XRCC3-205ENST00000553807 KIF24Q5T7B8 1368 aa28.01■■■□□ 2.07
XRCC3-205ENST00000553807 IL2RBP14784 551 aa28.01■■■□□ 2.07
XRCC3-205ENST00000553807 HSP90AB2PQ58FF8 381 aa28.01■■■□□ 2.07
XRCC3-205ENST00000553807 INSRP06213 1382 aa28■■■□□ 2.07
XRCC3-205ENST00000553807 WASHC2AQ641Q2 1341 aa28■■■□□ 2.07
XRCC3-205ENST00000553807 BAG6P46379 1132 aa28■■■□□ 2.07
XRCC3-205ENST00000553807 EXOC5O00471 708 aa27.98■■■□□ 2.07
XRCC3-205ENST00000553807 MARCH10Q8NA82 808 aaPredicted RBP27.98■■■□□ 2.07
XRCC3-205ENST00000553807 MAP2P11137 1827 aaKnown RBP27.97■■■□□ 2.07
XRCC3-205ENST00000553807 USHBP1Q8N6Y0 703 aa27.95■■■□□ 2.06
XRCC3-205ENST00000553807 NBPF6Q5VWK0 638 aa27.94■■■□□ 2.06
XRCC3-205ENST00000553807 MORC1Q86VD1 984 aa27.94■■■□□ 2.06
XRCC3-205ENST00000553807 NBPF4Q96M43 638 aa27.94■■■□□ 2.06
XRCC3-205ENST00000553807 POLKQ9UBT6 870 aa27.94■■■□□ 2.06
XRCC3-205ENST00000553807 EN1Q05925 392 aaPredicted RBP27.93■■■□□ 2.06
XRCC3-205ENST00000553807 MEGF6O75095 1541 aa27.92■■■□□ 2.06
XRCC3-205ENST00000553807 APBA3O96018 575 aa27.91■■■□□ 2.06
XRCC3-205ENST00000553807 AMER1Q5JTC6 1135 aaPredicted RBP27.91■■■□□ 2.06
XRCC3-205ENST00000553807 SBF2Q86WG5 1849 aa27.9■■■□□ 2.06
XRCC3-205ENST00000553807 BCL9O00512 1426 aa27.88■■■□□ 2.05
XRCC3-205ENST00000553807 PER1O15534 1290 aaPredicted RBP27.85■■■□□ 2.05
XRCC3-205ENST00000553807 EZH2Q15910 746 aaKnown RBP27.85■■■□□ 2.05
XRCC3-205ENST00000553807 CC2D1BQ5T0F9 858 aaKnown RBP27.85■■■□□ 2.05
XRCC3-205ENST00000553807 DDX54Q8TDD1 881 aaKnown RBP27.85■■■□□ 2.05
XRCC3-205ENST00000553807 RAPGEF4Q8WZA2 1011 aa27.85■■■□□ 2.05
XRCC3-205ENST00000553807 CNGB1Q14028 1251 aaPredicted RBP27.84■■■□□ 2.05
XRCC3-205ENST00000553807 PTF1AQ7RTS3 328 aa27.83■■■□□ 2.05
XRCC3-205ENST00000553807 SHANK3Q9BYB0 1731 aa27.83■■■□□ 2.05
XRCC3-205ENST00000553807 CAMKK2Q96RR4 588 aa27.82■■■□□ 2.04
XRCC3-205ENST00000553807 BCL11BQ9C0K0 894 aaPredicted RBP27.82■■■□□ 2.04
XRCC3-205ENST00000553807 NHSQ6T4R5 1651 aa27.81■■■□□ 2.04
XRCC3-205ENST00000553807 TATP17735 454 aaPredicted RBP27.81■■■□□ 2.04
XRCC3-205ENST00000553807 EIF4A2Q14240 407 aaKnown RBP27.81■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms