RNA–Protein interactions for RNA: ENST00000553726.5

PRKCH-205, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-205ENST00000553726 SPIRE2Q8WWL2 714 aa11.32□□□□□ -0.6
PRKCH-205ENST00000553726 ZNF518AQ6AHZ1 1483 aa11.32□□□□□ -0.6
PRKCH-205ENST00000553726 DXOO77932 396 aaKnown RBP11.31□□□□□ -0.6
PRKCH-205ENST00000553726 FBXO41Q8TF61 875 aa11.31□□□□□ -0.6
PRKCH-205ENST00000553726 CCDC18Q5T9S5 1454 aa11.31□□□□□ -0.6
PRKCH-205ENST00000553726 LMTK3Q96Q04 1460 aa11.31□□□□□ -0.6
PRKCH-205ENST00000553726 ARHGAP5Q13017 1502 aa11.3□□□□□ -0.6
PRKCH-205ENST00000553726 C9orf84Q5VXU9 1444 aa11.3□□□□□ -0.6
PRKCH-205ENST00000553726 PARP9Q8IXQ6 854 aa11.3□□□□□ -0.6
PRKCH-205ENST00000553726 LRRIQ1Q96JM4 1722 aa11.29□□□□□ -0.6
PRKCH-205ENST00000553726 FER1L4A9Z1Z3 1794 aa11.29□□□□□ -0.6
PRKCH-205ENST00000553726 CASKIN1Q8WXD9 1431 aa11.29□□□□□ -0.6
PRKCH-205ENST00000553726 ZBTB24O43167 697 aaPredicted RBP11.29□□□□□ -0.6
PRKCH-205ENST00000553726 FDX1P10109 184 aa11.29□□□□□ -0.6
PRKCH-205ENST00000553726 MLECQ14165 292 aa11.29□□□□□ -0.6
PRKCH-205ENST00000553726 SYMPKQ92797 1274 aaKnown RBP11.29□□□□□ -0.6
PRKCH-205ENST00000553726 BEGAINQ9BUH8 593 aa11.29□□□□□ -0.6
PRKCH-205ENST00000553726 TNFRSF10AO00220 468 aa11.28□□□□□ -0.6
PRKCH-205ENST00000553726 PCDHGC3Q9UN70 934 aa11.28□□□□□ -0.6
PRKCH-205ENST00000553726 SIGLEC1Q9BZZ2 1709 aa11.28□□□□□ -0.6
PRKCH-205ENST00000553726 KDM5CP41229 1560 aa11.28□□□□□ -0.6
PRKCH-205ENST00000553726 CDC42BPBQ9Y5S2 1711 aa11.27□□□□□ -0.61
PRKCH-205ENST00000553726 AFAP1Q8N556 730 aa11.27□□□□□ -0.61
PRKCH-205ENST00000553726 PKD2L1Q9P0L9 805 aa11.27□□□□□ -0.61
PRKCH-205ENST00000553726 MLH3Q9UHC1 1453 aa11.26□□□□□ -0.61
PRKCH-205ENST00000553726 ARHGEF12Q9NZN5 1544 aa11.26□□□□□ -0.61
PRKCH-205ENST00000553726 FOXC1Q12948 553 aa11.26□□□□□ -0.61
PRKCH-205ENST00000553726 RETREG3Q86VR2 466 aa11.26□□□□□ -0.61
PRKCH-205ENST00000553726 REREQ9P2R6 1566 aa11.25□□□□□ -0.61
PRKCH-205ENST00000553726 SETD1BQ9UPS6 1966 aaKnown RBP11.25□□□□□ -0.61
PRKCH-205ENST00000553726 PREX2Q70Z35 1606 aa11.25□□□□□ -0.61
PRKCH-205ENST00000553726 MOXD2PA6NHM9 499 aa11.25□□□□□ -0.61
PRKCH-205ENST00000553726 DGAT1O75907 488 aa11.25□□□□□ -0.61
PRKCH-205ENST00000553726 MS4A1P11836 297 aa11.25□□□□□ -0.61
PRKCH-205ENST00000553726 NDUFV2P19404 249 aa11.25□□□□□ -0.61
PRKCH-205ENST00000553726 PKDCCQ504Y2 493 aa11.25□□□□□ -0.61
PRKCH-205ENST00000553726 FYCO1Q9BQS8 1478 aa11.25□□□□□ -0.61
PRKCH-205ENST00000553726 C6orf229H3BNL8 230 aa11.24□□□□□ -0.61
PRKCH-205ENST00000553726 SLC24A1O60721 1099 aa11.24□□□□□ -0.61
PRKCH-205ENST00000553726 JUNDP17535 347 aa11.24□□□□□ -0.61
PRKCH-205ENST00000553726 DIXDC1Q155Q3 683 aa11.24□□□□□ -0.61
PRKCH-205ENST00000553726 SLC24A3Q9HC58 644 aa11.24□□□□□ -0.61
PRKCH-205ENST00000553726 HSPA2P54652 639 aa11.23□□□□□ -0.61
PRKCH-205ENST00000553726 PDE4DQ08499 809 aa11.23□□□□□ -0.61
PRKCH-205ENST00000553726 TBC1D2Q9BYX2 928 aa11.23□□□□□ -0.61
PRKCH-205ENST00000553726 ESF1Q9H501 851 aaKnown RBP11.23□□□□□ -0.61
PRKCH-205ENST00000553726 PREX1Q8TCU6 1659 aa11.23□□□□□ -0.61
PRKCH-205ENST00000553726 ABCC1P33527 1531 aa11.22□□□□□ -0.61
PRKCH-205ENST00000553726 AGLP35573 1532 aa11.22□□□□□ -0.61
PRKCH-205ENST00000553726 TRIM32Q13049 653 aa11.22□□□□□ -0.61
PRKCH-205ENST00000553726 CCDC24Q8N4L8 307 aa11.22□□□□□ -0.61
PRKCH-205ENST00000553726 BCANQ96GW7 911 aa11.22□□□□□ -0.61
PRKCH-205ENST00000553726 DIP2CQ9Y2E4 1556 aa11.22□□□□□ -0.61
PRKCH-205ENST00000553726 CDC42BPAQ5VT25 1732 aa11.21□□□□□ -0.61
PRKCH-205ENST00000553726 ITSN2Q9NZM3 1697 aa11.21□□□□□ -0.61
PRKCH-205ENST00000553726 FAM187AA6NFU0 413 aa11.21□□□□□ -0.61
PRKCH-205ENST00000553726 GJA5P36382 358 aa11.2□□□□□ -0.62
PRKCH-205ENST00000553726 TRAPPC8Q9Y2L5 1435 aa11.19□□□□□ -0.62
PRKCH-205ENST00000553726 CEBPAP49715 358 aaPredicted RBP11.19□□□□□ -0.62
PRKCH-205ENST00000553726 MYT1Q01538 1121 aa11.19□□□□□ -0.62
PRKCH-205ENST00000553726 ABCA6Q8N139 1617 aa11.19□□□□□ -0.62
PRKCH-205ENST00000553726 UHRF1BP1Q6BDS2 1440 aa11.18□□□□□ -0.62
PRKCH-205ENST00000553726 MTMR2Q13614 643 aa11.18□□□□□ -0.62
PRKCH-205ENST00000553726 TOR4AQ9NXH8 423 aa11.18□□□□□ -0.62
PRKCH-205ENST00000553726 ZNF777Q9ULD5 760 aaPredicted RBP11.18□□□□□ -0.62
PRKCH-205ENST00000553726 KIDINS220Q9ULH0 1771 aa11.18□□□□□ -0.62
PRKCH-205ENST00000553726 PLEKHH2Q8IVE3 1493 aa11.18□□□□□ -0.62
PRKCH-205ENST00000553726 CNTLNQ9NXG0 1405 aa11.18□□□□□ -0.62
PRKCH-205ENST00000553726 SPDYE5A6NIY4 337 aa11.17□□□□□ -0.62
PRKCH-205ENST00000553726 RSBN1LQ6PCB5 846 aaPredicted RBP11.17□□□□□ -0.62
PRKCH-205ENST00000553726 CYP4X1Q8N118 509 aa11.17□□□□□ -0.62
PRKCH-205ENST00000553726 NUDT12Q9BQG2 462 aa11.17□□□□□ -0.62
PRKCH-205ENST00000553726 CFDP1Q9UEE9 299 aaPredicted RBP11.17□□□□□ -0.62
PRKCH-205ENST00000553726 GPATCH8Q9UKJ3 1502 aaKnown RBP11.17□□□□□ -0.62
PRKCH-205ENST00000553726 KIAA1107Q9UPP5 1409 aa11.17□□□□□ -0.62
PRKCH-205ENST00000553726 SPAG9O60271 1321 aaKnown RBP11.16□□□□□ -0.62
PRKCH-205ENST00000553726 WNT7AO00755 349 aa11.16□□□□□ -0.62
PRKCH-205ENST00000553726 SPTLC1O15269 473 aa11.16□□□□□ -0.62
PRKCH-205ENST00000553726 C3P01024 1663 aa11.16□□□□□ -0.62
PRKCH-205ENST00000553726 SAMD9LQ8IVG5 1584 aa11.16□□□□□ -0.62
PRKCH-205ENST00000553726 CCNB3Q8WWL7 1395 aa11.16□□□□□ -0.62
PRKCH-205ENST00000553726 HNRNPMP52272 730 aaKnown RBP eCLIP11.15□□□□□ -0.62
PRKCH-205ENST00000553726 PRR7Q8TB68 274 aa11.15□□□□□ -0.62
PRKCH-205ENST00000553726 MTUS2Q5JR59 1369 aa11.15□□□□□ -0.63
PRKCH-205ENST00000553726 CCNYL3P0C7X3 344 aa11.13□□□□□ -0.63
PRKCH-205ENST00000553726 PTPRNQ16849 979 aa11.13□□□□□ -0.63
PRKCH-205ENST00000553726 DESI1Q6ICB0 168 aa11.13□□□□□ -0.63
PRKCH-205ENST00000553726 PTCRAQ6ISU1 281 aaPredicted RBP11.13□□□□□ -0.63
PRKCH-205ENST00000553726 RIC3Q7Z5B4 369 aa11.13□□□□□ -0.63
PRKCH-205ENST00000553726 PCDHB15Q9Y5E8 787 aa11.13□□□□□ -0.63
PRKCH-205ENST00000553726 MROH2AA6NES4 1674 aa11.13□□□□□ -0.63
PRKCH-205ENST00000553726 SYCP2Q9BX26 1530 aa11.13□□□□□ -0.63
PRKCH-205ENST00000553726 STRCQ7RTU9 1775 aa11.13□□□□□ -0.63
PRKCH-205ENST00000553726 WNT7BP56706 349 aa11.12□□□□□ -0.63
PRKCH-205ENST00000553726 MRGPRX2Q96LB1 330 aa11.12□□□□□ -0.63
PRKCH-205ENST00000553726 PTPRTO14522 1441 aa11.11□□□□□ -0.63
PRKCH-205ENST00000553726 NPATQ14207 1427 aa11.11□□□□□ -0.63
PRKCH-205ENST00000553726 ATP7AQ04656 1500 aa11.11□□□□□ -0.63
PRKCH-205ENST00000553726 TTC24A2A3L6 582 aaPredicted RBP11.11□□□□□ -0.63
PRKCH-205ENST00000553726 SNIP1Q8TAD8 396 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms