RNA–Protein interactions for RNA: ENST00000553696.1

NEMF-202, Transcript of nuclear export mediator factor, humanhuman

TSL 3

Gene NEMF, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-202ENST00000553696 ZBTB33Q86T24 672 aa9.29□□□□□ -0.92
NEMF-202ENST00000553696 KIFC2Q96AC6 838 aa9.29□□□□□ -0.92
NEMF-202ENST00000553696 SLC10A4Q96EP9 437 aa9.29□□□□□ -0.92
NEMF-202ENST00000553696 ZFP42Q96MM3 310 aa9.29□□□□□ -0.92
NEMF-202ENST00000553696 TREML4Q6UXN2 200 aa9.28□□□□□ -0.92
NEMF-202ENST00000553696 CCDC116Q8IYX3 515 aa9.28□□□□□ -0.92
NEMF-202ENST00000553696 INTS6LQ5JSJ4 861 aaKnown RBP9.27□□□□□ -0.93
NEMF-202ENST00000553696 MEIOBQ8N635 442 aa9.27□□□□□ -0.93
NEMF-202ENST00000553696 BANK1Q8NDB2 785 aa9.27□□□□□ -0.93
NEMF-202ENST00000553696 KCTD15Q96SI1 283 aaPredicted RBP9.27□□□□□ -0.93
NEMF-202ENST00000553696 SNRKQ9NRH2 765 aa9.27□□□□□ -0.93
NEMF-202ENST00000553696 SOCS7O14512 581 aa9.26□□□□□ -0.93
NEMF-202ENST00000553696 NFX1Q12986 1120 aaKnown RBP9.26□□□□□ -0.93
NEMF-202ENST00000553696 PPP1R26Q5T8A7 1209 aaPredicted RBP9.26□□□□□ -0.93
NEMF-202ENST00000553696 PURBQ96QR8 312 aaKnown RBP9.26□□□□□ -0.93
NEMF-202ENST00000553696 PNMA1Q8ND90 353 aa9.25□□□□□ -0.93
NEMF-202ENST00000553696 CDV3Q9UKY7 258 aaKnown RBP9.25□□□□□ -0.93
NEMF-202ENST00000553696 EMILIN1Q9Y6C2 1016 aa9.24□□□□□ -0.93
NEMF-202ENST00000553696 SOBPA7XYQ1 873 aa9.23□□□□□ -0.93
NEMF-202ENST00000553696 FBXO45P0C2W1 286 aa9.23□□□□□ -0.93
NEMF-202ENST00000553696 WFS1O76024 890 aa9.22□□□□□ -0.93
NEMF-202ENST00000553696 LINC00528Q8N1L1 170 aa9.22□□□□□ -0.93
NEMF-202ENST00000553696 ZBBXA8MT70 800 aa9.21□□□□□ -0.94
NEMF-202ENST00000553696 ESPNB1AK53 854 aa9.21□□□□□ -0.94
NEMF-202ENST00000553696 VEGFBP49765 207 aa9.21□□□□□ -0.94
NEMF-202ENST00000553696 CBLBQ13191 982 aa9.21□□□□□ -0.94
NEMF-202ENST00000553696 SCARF1Q14162 830 aa9.21□□□□□ -0.94
NEMF-202ENST00000553696 C6orf118Q5T5N4 469 aa9.21□□□□□ -0.94
NEMF-202ENST00000553696 NBPF20Q3BBV1 942 aa9.2□□□□□ -0.94
NEMF-202ENST00000553696 Q6ZVU0 165 aa9.2□□□□□ -0.94
NEMF-202ENST00000553696 DZIP3Q86Y13 1208 aaKnown RBP9.2□□□□□ -0.94
NEMF-202ENST00000553696 TERTO14746 1132 aaKnown RBP9.19□□□□□ -0.94
NEMF-202ENST00000553696 TMPRSS4Q9NRS4 437 aa9.19□□□□□ -0.94
NEMF-202ENST00000553696 NDUFB9Q9Y6M9 179 aa9.19□□□□□ -0.94
NEMF-202ENST00000553696 PGPEP1Q9NXJ5 209 aa9.18□□□□□ -0.94
NEMF-202ENST00000553696 ERVH48-1M5A8F1 160 aa9.17□□□□□ -0.94
NEMF-202ENST00000553696 BMP2P12643 396 aa9.17□□□□□ -0.94
NEMF-202ENST00000553696 RAB15P59190 212 aa9.17□□□□□ -0.94
NEMF-202ENST00000553696 DHX9Q08211 1270 aaKnown RBP9.17□□□□□ -0.94
NEMF-202ENST00000553696 NR1H3Q13133 447 aa9.17□□□□□ -0.94
NEMF-202ENST00000553696 ZNF784Q8NCA9 323 aaPredicted RBP9.17□□□□□ -0.94
NEMF-202ENST00000553696 SOS2Q07890 1332 aaPredicted RBP9.16□□□□□ -0.94
NEMF-202ENST00000553696 LILRA1O75019 489 aa9.16□□□□□ -0.94
NEMF-202ENST00000553696 TSEN34Q9BSV6 310 aaKnown RBP9.16□□□□□ -0.94
NEMF-202ENST00000553696 TBC1D2BQ9UPU7 963 aa9.16□□□□□ -0.94
NEMF-202ENST00000553696 PCDHB9Q9Y5E1 797 aa9.16□□□□□ -0.94
NEMF-202ENST00000553696 GIGYF1O75420 1035 aaPredicted RBP9.15□□□□□ -0.94
NEMF-202ENST00000553696 NXF1Q9UBU9 619 aaKnown RBP9.15□□□□□ -0.94
NEMF-202ENST00000553696 DNMT3LQ9UJW3 386 aa9.15□□□□□ -0.94
NEMF-202ENST00000553696 ADD1P35611 737 aaKnown RBP9.14□□□□□ -0.95
NEMF-202ENST00000553696 KDF1Q8NAX2 398 aaPredicted RBP9.14□□□□□ -0.95
NEMF-202ENST00000553696 AGBL1Q96MI9 1066 aa9.14□□□□□ -0.95
NEMF-202ENST00000553696 SPINT1O43278 529 aa9.13□□□□□ -0.95
NEMF-202ENST00000553696 UPP2O95045 317 aa9.13□□□□□ -0.95
NEMF-202ENST00000553696 IRF5Q13568 498 aa9.13□□□□□ -0.95
NEMF-202ENST00000553696 SEPT12Q8IYM1 358 aa9.13□□□□□ -0.95
NEMF-202ENST00000553696 H3BM21 787 aa9.11□□□□□ -0.95
NEMF-202ENST00000553696 APBB1O00213 710 aa9.11□□□□□ -0.95
NEMF-202ENST00000553696 MAN1A2O60476 641 aa9.11□□□□□ -0.95
NEMF-202ENST00000553696 ADH1AP07327 375 aa9.11□□□□□ -0.95
NEMF-202ENST00000553696 MCM6Q14566 821 aa9.11□□□□□ -0.95
NEMF-202ENST00000553696 RELBQ01201 579 aa9.1□□□□□ -0.95
NEMF-202ENST00000553696 NPAS3Q8IXF0 933 aa9.1□□□□□ -0.95
NEMF-202ENST00000553696 CYLDQ9NQC7 956 aa9.1□□□□□ -0.95
NEMF-202ENST00000553696 ERBB4Q15303 1308 aa9.09□□□□□ -0.95
NEMF-202ENST00000553696 TTLL8A6PVC2 850 aa9.09□□□□□ -0.95
NEMF-202ENST00000553696 WIPF1O43516 503 aa9.09□□□□□ -0.95
NEMF-202ENST00000553696 CTSOP43234 321 aaPredicted RBP9.09□□□□□ -0.95
NEMF-202ENST00000553696 INSM2Q96T92 566 aaPredicted RBP9.08□□□□□ -0.96
NEMF-202ENST00000553696 GMPRP36959 345 aa9.07□□□□□ -0.96
NEMF-202ENST00000553696 GDPD2Q9HCC8 539 aa9.07□□□□□ -0.96
NEMF-202ENST00000553696 SCTRP47872 440 aa9.06□□□□□ -0.96
NEMF-202ENST00000553696 ERVK-9P63128 1117 aa9.06□□□□□ -0.96
NEMF-202ENST00000553696 ZNF395Q9H8N7 513 aaPredicted RBP9.06□□□□□ -0.96
NEMF-202ENST00000553696 FIGNL2A6NMB9 653 aa9.05□□□□□ -0.96
NEMF-202ENST00000553696 PTGIRP43119 386 aa9.05□□□□□ -0.96
NEMF-202ENST00000553696 MCCD1P59942 119 aaPredicted RBP9.05□□□□□ -0.96
NEMF-202ENST00000553696 FOXD4L5Q5VV16 416 aaPredicted RBP9.05□□□□□ -0.96
NEMF-202ENST00000553696 PPFIA3O75145 1194 aa9.04□□□□□ -0.96
NEMF-202ENST00000553696 VSIG8P0DPA2 414 aa9.04□□□□□ -0.96
NEMF-202ENST00000553696 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.04□□□□□ -0.964e-6■■□□□ 13.3
NEMF-202ENST00000553696 RNF217Q8TC41 542 aa9.04□□□□□ -0.96
NEMF-202ENST00000553696 SLC16A10Q8TF71 515 aa9.04□□□□□ -0.96
NEMF-202ENST00000553696 ZNF330Q9Y3S2 320 aaPredicted RBP9.04□□□□□ -0.96
NEMF-202ENST00000553696 RNF20Q5VTR2 975 aa9.03□□□□□ -0.96
NEMF-202ENST00000553696 IRF7Q92985 503 aa9.03□□□□□ -0.96
NEMF-202ENST00000553696 CCDC85AQ96PX6 553 aaPredicted RBP9.03□□□□□ -0.96
NEMF-202ENST00000553696 CEP126Q9P2H0 1117 aa9.03□□□□□ -0.96
NEMF-202ENST00000553696 ABL2P42684 1182 aa9.02□□□□□ -0.97
NEMF-202ENST00000553696 PTSQ03393 145 aa9.02□□□□□ -0.97
NEMF-202ENST00000553696 VAC14Q08AM6 782 aa9.02□□□□□ -0.97
NEMF-202ENST00000553696 CC2D2BQ6DHV5 1058 aa9.02□□□□□ -0.97
NEMF-202ENST00000553696 ZNF592Q92610 1267 aa9.02□□□□□ -0.97
NEMF-202ENST00000553696 POLMQ9NP87 494 aaPredicted RBP9.02□□□□□ -0.97
NEMF-202ENST00000553696 PCDHB11Q9Y5F2 797 aa9.02□□□□□ -0.97
NEMF-202ENST00000553696 LORP23490 312 aaPredicted RBP9.01□□□□□ -0.97
NEMF-202ENST00000553696 CCDC125Q86Z20 511 aa9.01□□□□□ -0.97
NEMF-202ENST00000553696 CDCA7Q9BWT1 371 aaPredicted RBP9.01□□□□□ -0.97
NEMF-202ENST00000553696 OSBPL3Q9H4L5 887 aa9.01□□□□□ -0.97
NEMF-202ENST00000553696 COG6Q9Y2V7 657 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms