RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 PDE3BQ13370 1112 aa9.78□□□□□ -0.84
ATXN3-221ENST00000553498 CC2D1BQ5T0F9 858 aaKnown RBP9.78□□□□□ -0.84
ATXN3-221ENST00000553498 ANKRD36BQ8N2N9 1353 aa9.77□□□□□ -0.84
ATXN3-221ENST00000553498 TMEM2Q9UHN6 1383 aa9.77□□□□□ -0.84
ATXN3-221ENST00000553498 VARS2Q5ST30 1063 aaKnown RBP9.77□□□□□ -0.85
ATXN3-221ENST00000553498 NGEFQ8N5V2 710 aa9.77□□□□□ -0.85
ATXN3-221ENST00000553498 UPF1Q92900 1129 aaKnown RBP eCLIP9.77□□□□□ -0.85
ATXN3-221ENST00000553498 LHX6Q9UPM6 363 aa9.77□□□□□ -0.85
ATXN3-221ENST00000553498 CGNL1Q0VF96 1302 aa9.77□□□□□ -0.85
ATXN3-221ENST00000553498 SMG6Q86US8 1419 aaKnown RBP9.76□□□□□ -0.85
ATXN3-221ENST00000553498 ALKQ9UM73 1620 aa9.76□□□□□ -0.85
ATXN3-221ENST00000553498 TBC1D12O60347 775 aa9.76□□□□□ -0.85
ATXN3-221ENST00000553498 PPP2R1AP30153 589 aa9.76□□□□□ -0.85
ATXN3-221ENST00000553498 POGKQ9P215 609 aa9.76□□□□□ -0.85
ATXN3-221ENST00000553498 SUPT16HQ9Y5B9 1047 aaKnown RBP9.76□□□□□ -0.85
ATXN3-221ENST00000553498 PTPRMP28827 1452 aa9.76□□□□□ -0.85
ATXN3-221ENST00000553498 TECPR2O15040 1411 aa9.75□□□□□ -0.85
ATXN3-221ENST00000553498 FAM135BQ49AJ0 1406 aa9.75□□□□□ -0.85
ATXN3-221ENST00000553498 HAP1P54257 671 aaPredicted RBP9.75□□□□□ -0.85
ATXN3-221ENST00000553498 BLMP54132 1417 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-221ENST00000553498 NUTM2DQ5VT03 806 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-221ENST00000553498 PRAM1Q96QH2 718 aa9.74□□□□□ -0.85
ATXN3-221ENST00000553498 CARD14Q9BXL6 1004 aa9.74□□□□□ -0.85
ATXN3-221ENST00000553498 KRTAP3-3Q9BYR6 98 aa9.74□□□□□ -0.85
ATXN3-221ENST00000553498 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
ATXN3-221ENST00000553498 ANO8Q9HCE9 1232 aaPredicted RBP9.74□□□□□ -0.85
ATXN3-221ENST00000553498 TERF2IPQ9NYB0 399 aa9.74□□□□□ -0.85
ATXN3-221ENST00000553498 PLEKHG1Q9ULL1 1385 aa9.74□□□□□ -0.85
ATXN3-221ENST00000553498 TULP4Q9NRJ4 1543 aa9.73□□□□□ -0.85
ATXN3-221ENST00000553498 WDR43Q15061 677 aaKnown RBP eCLIP9.73□□□□□ -0.85
ATXN3-221ENST00000553498 ZNF687Q8N1G0 1237 aa9.73□□□□□ -0.85
ATXN3-221ENST00000553498 THEMISQ8N1K5 641 aaPredicted RBP9.73□□□□□ -0.85
ATXN3-221ENST00000553498 NUDCQ9Y266 331 aa9.73□□□□□ -0.85
ATXN3-221ENST00000553498 EID1Q9Y6B2 187 aa9.73□□□□□ -0.85
ATXN3-221ENST00000553498 MYOM1P52179 1685 aa9.73□□□□□ -0.85
ATXN3-221ENST00000553498 USP32Q8NFA0 1604 aa9.72□□□□□ -0.85
ATXN3-221ENST00000553498 QRICH2Q9H0J4 1663 aa9.72□□□□□ -0.85
ATXN3-221ENST00000553498 STK26Q9P289 416 aa9.72□□□□□ -0.85
ATXN3-221ENST00000553498 POLR3AO14802 1390 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-221ENST00000553498 NSD3Q9BZ95 1437 aa9.72□□□□□ -0.85
ATXN3-221ENST00000553498 MED14O60244 1454 aa9.72□□□□□ -0.85
ATXN3-221ENST00000553498 SRPK2P78362 688 aaKnown RBP9.71□□□□□ -0.86
ATXN3-221ENST00000553498 CNGB1Q14028 1251 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-221ENST00000553498 HDGFL2Q7Z4V5 671 aaPredicted RBP9.71□□□□□ -0.86
ATXN3-221ENST00000553498 SLC12A5Q9H2X9 1139 aa9.71□□□□□ -0.86
ATXN3-221ENST00000553498 ARHGAP23Q9P227 1491 aa9.71□□□□□ -0.86
ATXN3-221ENST00000553498 SLIT1O75093 1534 aa9.71□□□□□ -0.86
ATXN3-221ENST00000553498 ARHGEF28Q8N1W1 1705 aaKnown RBP9.7□□□□□ -0.86
ATXN3-221ENST00000553498 EVI5O60447 810 aa9.7□□□□□ -0.86
ATXN3-221ENST00000553498 POTEEQ6S8J3 1075 aa9.7□□□□□ -0.86
ATXN3-221ENST00000553498 MORC1Q86VD1 984 aa9.7□□□□□ -0.86
ATXN3-221ENST00000553498 MAP3K9P80192 1104 aa9.69□□□□□ -0.86
ATXN3-221ENST00000553498 CFAP53Q96M91 514 aa9.69□□□□□ -0.86
ATXN3-221ENST00000553498 TBX22Q9Y458 520 aa9.69□□□□□ -0.86
ATXN3-221ENST00000553498 ATP7BP35670 1465 aa9.68□□□□□ -0.86
ATXN3-221ENST00000553498 PIK3R4Q99570 1358 aa9.68□□□□□ -0.86
ATXN3-221ENST00000553498 RNF123Q5XPI4 1314 aa9.68□□□□□ -0.86
ATXN3-221ENST00000553498 E2F4Q16254 413 aa9.68□□□□□ -0.86
ATXN3-221ENST00000553498 TXNDC2Q86VQ3 553 aa9.68□□□□□ -0.86
ATXN3-221ENST00000553498 CDK19Q9BWU1 502 aa9.68□□□□□ -0.86
ATXN3-221ENST00000553498 ARIH1Q9Y4X5 557 aaPredicted RBP9.68□□□□□ -0.86
ATXN3-221ENST00000553498 CPS1P31327 1500 aa9.67□□□□□ -0.86
ATXN3-221ENST00000553498 ADAMTS13Q76LX8 1427 aa9.67□□□□□ -0.86
ATXN3-221ENST00000553498 METP08581 1390 aa9.67□□□□□ -0.86
ATXN3-221ENST00000553498 MINK1Q8N4C8 1332 aaPredicted RBP9.67□□□□□ -0.86
ATXN3-221ENST00000553498 WASLO00401 505 aaPredicted RBP9.67□□□□□ -0.86
ATXN3-221ENST00000553498 DPYSL4O14531 572 aa9.67□□□□□ -0.86
ATXN3-221ENST00000553498 WDR70Q9NW82 654 aa9.67□□□□□ -0.86
ATXN3-221ENST00000553498 ADAMTS8Q9UP79 889 aa9.67□□□□□ -0.86
ATXN3-221ENST00000553498 DIP2AQ14689 1571 aa9.67□□□□□ -0.86
ATXN3-221ENST00000553498 A0A1W2PP64 1363 aa9.66□□□□□ -0.86
ATXN3-221ENST00000553498 UBR1Q8IWV7 1749 aa9.65□□□□□ -0.86
ATXN3-221ENST00000553498 NRXN3Q9Y4C0 1643 aa9.65□□□□□ -0.86
ATXN3-221ENST00000553498 PSDA5PKW4 1024 aaPredicted RBP9.65□□□□□ -0.86
ATXN3-221ENST00000553498 BCANQ96GW7 911 aa9.65□□□□□ -0.86
ATXN3-221ENST00000553498 PTCH1Q13635 1447 aa9.65□□□□□ -0.87
ATXN3-221ENST00000553498 LTKP29376 864 aa9.64□□□□□ -0.87
ATXN3-221ENST00000553498 FOSBP53539 338 aa9.64□□□□□ -0.87
ATXN3-221ENST00000553498 MMRN1Q13201 1228 aa9.64□□□□□ -0.87
ATXN3-221ENST00000553498 SAFB2Q14151 953 aaKnown RBP eCLIP9.64□□□□□ -0.87
ATXN3-221ENST00000553498 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
ATXN3-221ENST00000553498 SETD1AO15047 1707 aaKnown RBP9.64□□□□□ -0.87
ATXN3-221ENST00000553498 KNDC1Q76NI1 1749 aa9.64□□□□□ -0.87
ATXN3-221ENST00000553498 CEBPAP49715 358 aaPredicted RBP9.63□□□□□ -0.87
ATXN3-221ENST00000553498 WAPLQ7Z5K2 1190 aa9.63□□□□□ -0.87
ATXN3-221ENST00000553498 PNNQ9H307 717 aaKnown RBP9.63□□□□□ -0.87
ATXN3-221ENST00000553498 CABP1Q9NZU7 370 aa9.63□□□□□ -0.87
ATXN3-221ENST00000553498 CD163L1Q9NR16 1453 aa9.63□□□□□ -0.87
ATXN3-221ENST00000553498 CPSF1Q10570 1443 aaKnown RBP9.63□□□□□ -0.87
ATXN3-221ENST00000553498 EDC4Q6P2E9 1401 aaKnown RBP9.63□□□□□ -0.87
ATXN3-221ENST00000553498 ADGRB2O60241 1585 aa9.63□□□□□ -0.87
ATXN3-221ENST00000553498 ZNF521Q96K83 1311 aa9.62□□□□□ -0.87
ATXN3-221ENST00000553498 FYB1O15117 783 aa9.62□□□□□ -0.87
ATXN3-221ENST00000553498 PPP4R2Q9NY27 417 aa9.62□□□□□ -0.87
ATXN3-221ENST00000553498 PLEKHH1Q9ULM0 1364 aa9.62□□□□□ -0.87
ATXN3-221ENST00000553498 C3P01024 1663 aa9.61□□□□□ -0.87
ATXN3-221ENST00000553498 MTHFSP49914 203 aa9.61□□□□□ -0.87
ATXN3-221ENST00000553498 PDIA6Q15084 440 aa9.61□□□□□ -0.87
ATXN3-221ENST00000553498 VSIG10Q8N0Z9 540 aa9.61□□□□□ -0.87
ATXN3-221ENST00000553498 NUDT16Q96DE0 195 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms