RNA–Protein interactions for RNA: ENST00000553338.1

IFT43-204, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 684 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-204ENST00000553338 TNS1Q9HBL0 1735 aaKnown RBP27.46■■□□□ 1.99
IFT43-204ENST00000553338 A0A1W2PP64 1363 aa27.46■■□□□ 1.99
IFT43-204ENST00000553338 PARP4Q9UKK3 1724 aaKnown RBP27.45■■□□□ 1.99
IFT43-204ENST00000553338 EDC4Q6P2E9 1401 aaKnown RBP27.45■■□□□ 1.98
IFT43-204ENST00000553338 SLC24A1O60721 1099 aa27.45■■□□□ 1.98
IFT43-204ENST00000553338 EN1Q05925 392 aaPredicted RBP27.45■■□□□ 1.98
IFT43-204ENST00000553338 USP31Q70CQ4 1352 aa27.45■■□□□ 1.98
IFT43-204ENST00000553338 WDR17Q8IZU2 1322 aa27.44■■□□□ 1.98
IFT43-204ENST00000553338 TRIM37O94972 964 aa27.44■■□□□ 1.98
IFT43-204ENST00000553338 USP54Q70EL1 1684 aa27.43■■□□□ 1.98
IFT43-204ENST00000553338 CSB-PGBD3P0DP91 1061 aa27.43■■□□□ 1.98
IFT43-204ENST00000553338 USP47Q96K76 1375 aa27.43■■□□□ 1.98
IFT43-204ENST00000553338 RGPD5Q99666 1765 aa27.43■■□□□ 1.98
IFT43-204ENST00000553338 NINLQ9Y2I6 1382 aa27.42■■□□□ 1.98
IFT43-204ENST00000553338 DISP2A7MBM2 1401 aa27.41■■□□□ 1.98
IFT43-204ENST00000553338 ABCC6O95255 1503 aa27.39■■□□□ 1.98
IFT43-204ENST00000553338 LRRC37A3O60309 1634 aa27.38■■□□□ 1.97
IFT43-204ENST00000553338 WNK3Q9BYP7 1800 aa27.37■■□□□ 1.97
IFT43-204ENST00000553338 APBA3O96018 575 aa27.37■■□□□ 1.97
IFT43-204ENST00000553338 TMF1P82094 1093 aa27.37■■□□□ 1.97
IFT43-204ENST00000553338 CLSPNQ9HAW4 1339 aa27.37■■□□□ 1.97
IFT43-204ENST00000553338 EZH2Q15910 746 aaKnown RBP27.36■■□□□ 1.97
IFT43-204ENST00000553338 DDB1Q16531 1140 aa27.36■■□□□ 1.97
IFT43-204ENST00000553338 CARD10Q9BWT7 1032 aa27.36■■□□□ 1.97
IFT43-204ENST00000553338 TIMELESSQ9UNS1 1208 aa27.35■■□□□ 1.97
IFT43-204ENST00000553338 LTN1O94822 1766 aa27.35■■□□□ 1.97
IFT43-204ENST00000553338 OVOS2A0A0J9YW53 1432 aa27.34■■□□□ 1.97
IFT43-204ENST00000553338 OVOS2Q6IE36 1432 aa27.34■■□□□ 1.97
IFT43-204ENST00000553338 OVOS2A0A0G2JMS6 1433 aa27.33■■□□□ 1.97
IFT43-204ENST00000553338 PSDA5PKW4 1024 aaPredicted RBP27.33■■□□□ 1.97
IFT43-204ENST00000553338 CDCA7Q9BWT1 371 aaPredicted RBP27.33■■□□□ 1.97
IFT43-204ENST00000553338 C11orf95C9JLR9 678 aaPredicted RBP27.32■■□□□ 1.96
IFT43-204ENST00000553338 CAMKK2Q96RR4 588 aa27.31■■□□□ 1.96
IFT43-204ENST00000553338 ANKRD36BQ8N2N9 1353 aa27.31■■□□□ 1.96
IFT43-204ENST00000553338 CCDC7Q96M83 1385 aa27.31■■□□□ 1.96
IFT43-204ENST00000553338 PEAK1Q9H792 1746 aa27.3■■□□□ 1.96
IFT43-204ENST00000553338 ERBB3P21860 1342 aa27.29■■□□□ 1.96
IFT43-204ENST00000553338 PARD3Q8TEW0 1356 aa27.29■■□□□ 1.96
IFT43-204ENST00000553338 COG3Q96JB2 828 aa27.28■■□□□ 1.96
IFT43-204ENST00000553338 CDCA8Q53HL2 280 aa27.27■■□□□ 1.96
IFT43-204ENST00000553338 NLRP2Q9NX02 1062 aa27.27■■□□□ 1.96
IFT43-204ENST00000553338 ANKRD24Q8TF21 1146 aa27.26■■□□□ 1.95
IFT43-204ENST00000553338 R3HDM1Q15032 1099 aaKnown RBP27.25■■□□□ 1.95
IFT43-204ENST00000553338 EXOC5O00471 708 aa27.24■■□□□ 1.95
IFT43-204ENST00000553338 MARCH10Q8NA82 808 aaPredicted RBP27.24■■□□□ 1.95
IFT43-204ENST00000553338 RREB1Q92766 1687 aa27.24■■□□□ 1.95
IFT43-204ENST00000553338 CCER1Q8TC90 406 aaPredicted RBP27.22■■□□□ 1.95
IFT43-204ENST00000553338 SBF2Q86WG5 1849 aa27.22■■□□□ 1.95
IFT43-204ENST00000553338 IP6K1Q92551 441 aa27.21■■□□□ 1.95
IFT43-204ENST00000553338 TNS2Q63HR2 1409 aa27.21■■□□□ 1.95
IFT43-204ENST00000553338 LRP5O75197 1615 aa27.19■■□□□ 1.94
IFT43-204ENST00000553338 NUP188Q5SRE5 1749 aa27.19■■□□□ 1.94
IFT43-204ENST00000553338 MAP3K19Q56UN5 1328 aa27.18■■□□□ 1.94
IFT43-204ENST00000553338 LTV1Q96GA3 475 aaPredicted RBP27.18■■□□□ 1.94
IFT43-204ENST00000553338 BCL11BQ9C0K0 894 aaPredicted RBP27.18■■□□□ 1.94
IFT43-204ENST00000553338 BCL9O00512 1426 aa27.17■■□□□ 1.94
IFT43-204ENST00000553338 IL2RBP14784 551 aa27.17■■□□□ 1.94
IFT43-204ENST00000553338 FBLN1P23142 703 aa27.17■■□□□ 1.94
IFT43-204ENST00000553338 AMPHP49418 695 aa27.17■■□□□ 1.94
IFT43-204ENST00000553338 GGNBP2Q9H3C7 697 aa27.17■■□□□ 1.94
IFT43-204ENST00000553338 SRCAPQ6ZRS2 3230 aa27.17■■□□□ 1.94
IFT43-204ENST00000553338 FYB1O15117 783 aa27.16■■□□□ 1.94
IFT43-204ENST00000553338 MYOM1P52179 1685 aa27.16■■□□□ 1.94
IFT43-204ENST00000553338 NBPF14Q5TI25 921 aa27.15■■□□□ 1.94
IFT43-204ENST00000553338 PTF1AQ7RTS3 328 aa27.15■■□□□ 1.94
IFT43-204ENST00000553338 FAM208AQ9UK61 1670 aaKnown RBP27.14■■□□□ 1.94
IFT43-204ENST00000553338 HOXC9P31274 260 aa27.14■■□□□ 1.94
IFT43-204ENST00000553338 RGPD3A6NKT7 1758 aaPredicted RBP27.14■■□□□ 1.93
IFT43-204ENST00000553338 RGPD4Q7Z3J3 1758 aa27.14■■□□□ 1.93
IFT43-204ENST00000553338 KIF20BQ96Q89 1820 aa27.13■■□□□ 1.93
IFT43-204ENST00000553338 PLSCR1O15162 318 aa27.12■■□□□ 1.93
IFT43-204ENST00000553338 RRS1Q15050 365 aaKnown RBP27.11■■□□□ 1.93
IFT43-204ENST00000553338 RTL1A6NKG5 1358 aa27.09■■□□□ 1.93
IFT43-204ENST00000553338 NSD3Q9BZ95 1437 aa27.09■■□□□ 1.93
IFT43-204ENST00000553338 POLR3GLQ9BT43 218 aa27.09■■□□□ 1.93
IFT43-204ENST00000553338 CARD14Q9BXL6 1004 aa27.08■■□□□ 1.93
IFT43-204ENST00000553338 ACSBG1Q96GR2 724 aa27.07■■□□□ 1.92
IFT43-204ENST00000553338 NHSQ6T4R5 1651 aa27.06■■□□□ 1.92
IFT43-204ENST00000553338 EIF4G2P78344 907 aaKnown RBP eCLIP27.06■■□□□ 1.92
IFT43-204ENST00000553338 KCNQ2O43526 872 aa27.05■■□□□ 1.92
IFT43-204ENST00000553338 RGPD2P0DJD1 1756 aa27.04■■□□□ 1.92
IFT43-204ENST00000553338 SMG6Q86US8 1419 aaKnown RBP27.03■■□□□ 1.92
IFT43-204ENST00000553338 HSPA5P11021 654 aaKnown RBP27.02■■□□□ 1.92
IFT43-204ENST00000553338 DDX54Q8TDD1 881 aaKnown RBP27.02■■□□□ 1.92
IFT43-204ENST00000553338 PROM2Q8N271 834 aa27.01■■□□□ 1.91
IFT43-204ENST00000553338 ANO8Q9HCE9 1232 aaPredicted RBP27■■□□□ 1.91
IFT43-204ENST00000553338 FLT4P35916 1363 aa26.99■■□□□ 1.91
IFT43-204ENST00000553338 TXNRD1Q16881 649 aa26.99■■□□□ 1.91
IFT43-204ENST00000553338 CGNL1Q0VF96 1302 aa26.98■■□□□ 1.91
IFT43-204ENST00000553338 INSRP06213 1382 aa26.97■■□□□ 1.91
IFT43-204ENST00000553338 MEGF6O75095 1541 aa26.97■■□□□ 1.91
IFT43-204ENST00000553338 HSP90AB2PQ58FF8 381 aa26.97■■□□□ 1.91
IFT43-204ENST00000553338 NBPF6Q5VWK0 638 aa26.97■■□□□ 1.91
IFT43-204ENST00000553338 USHBP1Q8N6Y0 703 aa26.97■■□□□ 1.91
IFT43-204ENST00000553338 NBPF4Q96M43 638 aa26.97■■□□□ 1.91
IFT43-204ENST00000553338 KIF24Q5T7B8 1368 aa26.97■■□□□ 1.91
IFT43-204ENST00000553338 BTAF1O14981 1849 aa26.95■■□□□ 1.91
IFT43-204ENST00000553338 ZCRB1Q8TBF4 217 aaKnown RBP26.95■■□□□ 1.9
IFT43-204ENST00000553338 EMILIN1Q9Y6C2 1016 aa26.95■■□□□ 1.9
IFT43-204ENST00000553338 RAPGEF4Q8WZA2 1011 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms