RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 IL13P35225 146 aa24.54■■□□□ 1.52
LRP1-204ENST00000553277 RRP1P56182 461 aaKnown RBP24.54■■□□□ 1.52
LRP1-204ENST00000553277 PPM1GO15355 546 aaPredicted RBP24.53■■□□□ 1.52
LRP1-204ENST00000553277 LMOD2Q6P5Q4 547 aa24.53■■□□□ 1.52
LRP1-204ENST00000553277 ARHGEF25Q86VW2 580 aa24.53■■□□□ 1.52
LRP1-204ENST00000553277 LTN1O94822 1766 aa24.51■■□□□ 1.51
LRP1-204ENST00000553277 SOX12O15370 315 aa24.5■■□□□ 1.51
LRP1-204ENST00000553277 HSP90AB2PQ58FF8 381 aa24.5■■□□□ 1.51
LRP1-204ENST00000553277 LRRC59Q96AG4 307 aaKnown RBP24.5■■□□□ 1.51
LRP1-204ENST00000553277 HOXC9P31274 260 aa24.49■■□□□ 1.51
LRP1-204ENST00000553277 IP6K1Q92551 441 aa24.49■■□□□ 1.51
LRP1-204ENST00000553277 CCDC136Q96JN2 1154 aa24.49■■□□□ 1.51
LRP1-204ENST00000553277 AMPHP49418 695 aa24.48■■□□□ 1.51
LRP1-204ENST00000553277 CPDO75976 1380 aa24.48■■□□□ 1.51
LRP1-204ENST00000553277 UBAP1LF5GYI3 381 aa24.47■■□□□ 1.51
LRP1-204ENST00000553277 NGEFQ8N5V2 710 aa24.47■■□□□ 1.51
LRP1-204ENST00000553277 EIF4A2Q14240 407 aaKnown RBP24.46■■□□□ 1.51
LRP1-204ENST00000553277 ABCC6O95255 1503 aa24.46■■□□□ 1.51
LRP1-204ENST00000553277 RGPD1P0DJD0 1748 aa24.46■■□□□ 1.51
LRP1-204ENST00000553277 U2AF1L5P0DN76 240 aaPredicted RBP24.46■■□□□ 1.51
LRP1-204ENST00000553277 U2AF1Q01081 240 aaKnown RBP eCLIP24.46■■□□□ 1.51
LRP1-204ENST00000553277 COL16A1Q07092 1604 aaPredicted RBP24.45■■□□□ 1.5
LRP1-204ENST00000553277 FCHSD2O94868 740 aa24.44■■□□□ 1.5
LRP1-204ENST00000553277 COL22A1Q8NFW1 1626 aaPredicted RBP24.43■■□□□ 1.5
LRP1-204ENST00000553277 ZNF521Q96K83 1311 aa24.43■■□□□ 1.5
LRP1-204ENST00000553277 PLEKHF1Q96S99 279 aa24.43■■□□□ 1.5
LRP1-204ENST00000553277 ABCA3Q99758 1704 aa24.42■■□□□ 1.5
LRP1-204ENST00000553277 U2SURPO15042 1029 aaKnown RBP24.42■■□□□ 1.5
LRP1-204ENST00000553277 NCBP3Q53F19 620 aaKnown RBP24.42■■□□□ 1.5
LRP1-204ENST00000553277 CABLES1Q8TDN4 633 aa24.42■■□□□ 1.5
LRP1-204ENST00000553277 RUNDC1Q96C34 613 aa24.42■■□□□ 1.5
LRP1-204ENST00000553277 PHLPP1O60346 1717 aa24.42■■□□□ 1.5
LRP1-204ENST00000553277 COL18A1P39060 1754 aa24.41■■□□□ 1.5
LRP1-204ENST00000553277 ANP32EQ9BTT0 268 aa24.41■■□□□ 1.5
LRP1-204ENST00000553277 PNNQ9H307 717 aaKnown RBP24.41■■□□□ 1.5
LRP1-204ENST00000553277 CDCA7LQ96GN5 454 aa24.4■■□□□ 1.5
LRP1-204ENST00000553277 RSPH6AQ9H0K4 717 aa24.4■■□□□ 1.5
LRP1-204ENST00000553277 PIP4K2BP78356 416 aa24.39■■□□□ 1.49
LRP1-204ENST00000553277 KDRP35968 1356 aa24.39■■□□□ 1.49
LRP1-204ENST00000553277 IGSF1Q8N6C5 1336 aa24.38■■□□□ 1.49
LRP1-204ENST00000553277 ZC3H6P61129 1189 aaKnown RBP24.37■■□□□ 1.49
LRP1-204ENST00000553277 SENP3-EIF4A1A0A087X0R7 540 aa24.37■■□□□ 1.49
LRP1-204ENST00000553277 CCDC146Q8IYE0 955 aa24.37■■□□□ 1.49
LRP1-204ENST00000553277 SALL2Q9Y467 1007 aaPredicted RBP24.37■■□□□ 1.49
LRP1-204ENST00000553277 KIAA0232Q92628 1395 aa24.36■■□□□ 1.49
LRP1-204ENST00000553277 AXIN2Q9Y2T1 843 aa24.36■■□□□ 1.49
LRP1-204ENST00000553277 APAF1O14727 1248 aa24.35■■□□□ 1.49
LRP1-204ENST00000553277 EYA1Q99502 592 aa24.35■■□□□ 1.49
LRP1-204ENST00000553277 NCAPD2Q15021 1401 aa24.34■■□□□ 1.49
LRP1-204ENST00000553277 GOLGA2Q08379 1002 aa24.33■■□□□ 1.49
LRP1-204ENST00000553277 TCP11L2Q8N4U5 519 aa24.33■■□□□ 1.49
LRP1-204ENST00000553277 PHF23Q9BUL5 403 aaPredicted RBP24.33■■□□□ 1.49
LRP1-204ENST00000553277 LMO7Q8WWI1 1683 aa24.32■■□□□ 1.48
LRP1-204ENST00000553277 PRKAR2BP31323 418 aa24.31■■□□□ 1.48
LRP1-204ENST00000553277 DUSP27Q5VZP5 1158 aa24.31■■□□□ 1.48
LRP1-204ENST00000553277 TRMT2AQ8IZ69 625 aaKnown RBP24.31■■□□□ 1.48
LRP1-204ENST00000553277 ERBB3P21860 1342 aa24.31■■□□□ 1.48
LRP1-204ENST00000553277 RGPD5Q99666 1765 aa24.31■■□□□ 1.48
LRP1-204ENST00000553277 PLEKHG5O94827 1062 aa24.3■■□□□ 1.48
LRP1-204ENST00000553277 HMOX1P09601 288 aa24.3■■□□□ 1.48
LRP1-204ENST00000553277 CCDC27Q2M243 656 aa24.3■■□□□ 1.48
LRP1-204ENST00000553277 SULT6B1Q6IMI4 303 aa24.3■■□□□ 1.48
LRP1-204ENST00000553277 EXOC6Q8TAG9 804 aa24.3■■□□□ 1.48
LRP1-204ENST00000553277 CAMTA1Q9Y6Y1 1673 aa24.3■■□□□ 1.48
LRP1-204ENST00000553277 AEBP1Q8IUX7 1158 aa24.29■■□□□ 1.48
LRP1-204ENST00000553277 ANKRD24Q8TF21 1146 aa24.28■■□□□ 1.48
LRP1-204ENST00000553277 PRDM11Q9NQV5 511 aa24.28■■□□□ 1.48
LRP1-204ENST00000553277 SLFN5Q08AF3 891 aa24.27■■□□□ 1.48
LRP1-204ENST00000553277 NBPF6Q5VWK0 638 aa24.27■■□□□ 1.48
LRP1-204ENST00000553277 NBPF4Q96M43 638 aa24.27■■□□□ 1.48
LRP1-204ENST00000553277 PHACTR3Q96KR7 559 aa24.27■■□□□ 1.48
LRP1-204ENST00000553277 MAPK8IP3Q9UPT6 1336 aa24.27■■□□□ 1.48
LRP1-204ENST00000553277 FAM208AQ9UK61 1670 aaKnown RBP24.26■■□□□ 1.47
LRP1-204ENST00000553277 ZBTB7CA1YPR0 619 aa24.26■■□□□ 1.47
LRP1-204ENST00000553277 TMPOP42166 694 aaKnown RBP24.26■■□□□ 1.47
LRP1-204ENST00000553277 HAP1P54257 671 aaPredicted RBP24.25■■□□□ 1.47
LRP1-204ENST00000553277 CHRNA2Q15822 529 aa24.25■■□□□ 1.47
LRP1-204ENST00000553277 LTV1Q96GA3 475 aaPredicted RBP24.25■■□□□ 1.47
LRP1-204ENST00000553277 FAM83GA6ND36 823 aa24.24■■□□□ 1.47
LRP1-204ENST00000553277 RGPD2P0DJD1 1756 aa24.24■■□□□ 1.47
LRP1-204ENST00000553277 JCADQ9P266 1359 aa24.24■■□□□ 1.47
LRP1-204ENST00000553277 NEFMP07197 916 aa24.24■■□□□ 1.47
LRP1-204ENST00000553277 WWC1Q8IX03 1113 aa24.23■■□□□ 1.47
LRP1-204ENST00000553277 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.23■■□□□ 1.47
LRP1-204ENST00000553277 TCERG1O14776 1098 aaKnown RBP24.22■■□□□ 1.47
LRP1-204ENST00000553277 NFE2L2Q16236 605 aa24.22■■□□□ 1.47
LRP1-204ENST00000553277 PLEKHG2Q9H7P9 1386 aa24.22■■□□□ 1.47
LRP1-204ENST00000553277 COL14A1Q05707 1796 aaKnown RBP24.22■■□□□ 1.47
LRP1-204ENST00000553277 COL5A2P05997 1499 aaPredicted RBP24.21■■□□□ 1.47
LRP1-204ENST00000553277 E9PSI1 815 aa24.21■■□□□ 1.47
LRP1-204ENST00000553277 MSH5O43196 834 aa24.21■■□□□ 1.47
LRP1-204ENST00000553277 MS4A1P11836 297 aa24.2■■□□□ 1.46
LRP1-204ENST00000553277 TRIM35Q9UPQ4 493 aa24.2■■□□□ 1.46
LRP1-204ENST00000553277 WDR63Q8IWG1 891 aa24.19■■□□□ 1.46
LRP1-204ENST00000553277 WDR17Q8IZU2 1322 aa24.19■■□□□ 1.46
LRP1-204ENST00000553277 RRP7AQ9Y3A4 280 aaKnown RBP24.18■■□□□ 1.46
LRP1-204ENST00000553277 RIPK4P57078 832 aa24.18■■□□□ 1.46
LRP1-204ENST00000553277 SPATA31A6Q5VVP1 1343 aa24.16■■□□□ 1.46
LRP1-204ENST00000553277 DLG5Q8TDM6 1919 aa24.15■■□□□ 1.46
LRP1-204ENST00000553277 NEUROD2Q15784 382 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms