RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 SLC24A1O60721 1099 aa22.32■■□□□ 1.16
CDK4-215ENST00000553237 TRIM37O94972 964 aa22.32■■□□□ 1.16
CDK4-215ENST00000553237 COL18A1P39060 1754 aa22.31■■□□□ 1.16
CDK4-215ENST00000553237 CSB-PGBD3P0DP91 1061 aa22.31■■□□□ 1.16
CDK4-215ENST00000553237 EN1Q05925 392 aaPredicted RBP22.31■■□□□ 1.16
CDK4-215ENST00000553237 EDC4Q6P2E9 1401 aaKnown RBP22.31■■□□□ 1.16
CDK4-215ENST00000553237 WDR17Q8IZU2 1322 aa22.31■■□□□ 1.16
CDK4-215ENST00000553237 TIMELESSQ9UNS1 1208 aa22.3■■□□□ 1.16
CDK4-215ENST00000553237 NFAT5O94916 1531 aa22.3■■□□□ 1.16
CDK4-215ENST00000553237 CLSPNQ9HAW4 1339 aa22.3■■□□□ 1.16
CDK4-215ENST00000553237 TMF1P82094 1093 aa22.29■■□□□ 1.16
CDK4-215ENST00000553237 NINLQ9Y2I6 1382 aa22.26■■□□□ 1.15
CDK4-215ENST00000553237 APBA3O96018 575 aa22.25■■□□□ 1.15
CDK4-215ENST00000553237 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
CDK4-215ENST00000553237 CARD10Q9BWT7 1032 aa22.25■■□□□ 1.15
CDK4-215ENST00000553237 RGPD1P0DJD0 1748 aa22.25■■□□□ 1.15
CDK4-215ENST00000553237 RGPD5Q99666 1765 aa22.25■■□□□ 1.15
CDK4-215ENST00000553237 EZH2Q15910 746 aaKnown RBP22.24■■□□□ 1.15
CDK4-215ENST00000553237 DDB1Q16531 1140 aa22.24■■□□□ 1.15
CDK4-215ENST00000553237 PARP4Q9UKK3 1724 aaKnown RBP22.21■■□□□ 1.15
CDK4-215ENST00000553237 PSDA5PKW4 1024 aaPredicted RBP22.21■■□□□ 1.15
CDK4-215ENST00000553237 COG3Q96JB2 828 aa22.21■■□□□ 1.15
CDK4-215ENST00000553237 ANKRD36BQ8N2N9 1353 aa22.21■■□□□ 1.15
CDK4-215ENST00000553237 OVOS2A0A0J9YW53 1432 aa22.21■■□□□ 1.15
CDK4-215ENST00000553237 OVOS2Q6IE36 1432 aa22.21■■□□□ 1.15
CDK4-215ENST00000553237 USP54Q70EL1 1684 aa22.2■■□□□ 1.15
CDK4-215ENST00000553237 CAMKK2Q96RR4 588 aa22.2■■□□□ 1.14
CDK4-215ENST00000553237 NLRP2Q9NX02 1062 aa22.2■■□□□ 1.14
CDK4-215ENST00000553237 DISP2A7MBM2 1401 aa22.2■■□□□ 1.14
CDK4-215ENST00000553237 TNS1Q9HBL0 1735 aaKnown RBP22.2■■□□□ 1.14
CDK4-215ENST00000553237 FBLN1P23142 703 aa22.19■■□□□ 1.14
CDK4-215ENST00000553237 CDCA8Q53HL2 280 aa22.19■■□□□ 1.14
CDK4-215ENST00000553237 ANKRD24Q8TF21 1146 aa22.19■■□□□ 1.14
CDK4-215ENST00000553237 CDCA7Q9BWT1 371 aaPredicted RBP22.19■■□□□ 1.14
CDK4-215ENST00000553237 ERBB3P21860 1342 aa22.18■■□□□ 1.14
CDK4-215ENST00000553237 MARCH10Q8NA82 808 aaPredicted RBP22.18■■□□□ 1.14
CDK4-215ENST00000553237 ABCC6O95255 1503 aa22.17■■□□□ 1.14
CDK4-215ENST00000553237 CCDC7Q96M83 1385 aa22.17■■□□□ 1.14
CDK4-215ENST00000553237 LRRC37A3O60309 1634 aa22.17■■□□□ 1.14
CDK4-215ENST00000553237 OVOS2A0A0G2JMS6 1433 aa22.16■■□□□ 1.14
CDK4-215ENST00000553237 EXOC5O00471 708 aa22.16■■□□□ 1.14
CDK4-215ENST00000553237 LTV1Q96GA3 475 aaPredicted RBP22.16■■□□□ 1.14
CDK4-215ENST00000553237 LTN1O94822 1766 aa22.15■■□□□ 1.14
CDK4-215ENST00000553237 C11orf95C9JLR9 678 aaPredicted RBP22.15■■□□□ 1.14
CDK4-215ENST00000553237 IP6K1Q92551 441 aa22.15■■□□□ 1.14
CDK4-215ENST00000553237 GGNBP2Q9H3C7 697 aa22.15■■□□□ 1.14
CDK4-215ENST00000553237 FYB1O15117 783 aa22.14■■□□□ 1.13
CDK4-215ENST00000553237 R3HDM1Q15032 1099 aaKnown RBP22.14■■□□□ 1.13
CDK4-215ENST00000553237 SRCAPQ6ZRS2 3230 aa22.14■■□□□ 1.13
CDK4-215ENST00000553237 MAP3K19Q56UN5 1328 aa22.13■■□□□ 1.13
CDK4-215ENST00000553237 PTF1AQ7RTS3 328 aa22.13■■□□□ 1.13
CDK4-215ENST00000553237 AMPHP49418 695 aa22.12■■□□□ 1.13
CDK4-215ENST00000553237 POLR3GLQ9BT43 218 aa22.12■■□□□ 1.13
CDK4-215ENST00000553237 WNK3Q9BYP7 1800 aa22.11■■□□□ 1.13
CDK4-215ENST00000553237 PEAK1Q9H792 1746 aa22.11■■□□□ 1.13
CDK4-215ENST00000553237 PARD3Q8TEW0 1356 aa22.11■■□□□ 1.13
CDK4-215ENST00000553237 IL2RBP14784 551 aa22.1■■□□□ 1.13
CDK4-215ENST00000553237 RRS1Q15050 365 aaKnown RBP22.1■■□□□ 1.13
CDK4-215ENST00000553237 CARD14Q9BXL6 1004 aa22.1■■□□□ 1.13
CDK4-215ENST00000553237 HOXC9P31274 260 aa22.09■■□□□ 1.13
CDK4-215ENST00000553237 BCL11BQ9C0K0 894 aaPredicted RBP22.09■■□□□ 1.13
CDK4-215ENST00000553237 TNS2Q63HR2 1409 aa22.06■■□□□ 1.12
CDK4-215ENST00000553237 HSPA5P11021 654 aaKnown RBP22.06■■□□□ 1.12
CDK4-215ENST00000553237 EIF4G2P78344 907 aaKnown RBP eCLIP22.06■■□□□ 1.12
CDK4-215ENST00000553237 NBPF14Q5TI25 921 aa22.05■■□□□ 1.12
CDK4-215ENST00000553237 NSD3Q9BZ95 1437 aa22.05■■□□□ 1.12
CDK4-215ENST00000553237 PLSCR1O15162 318 aa22.04■■□□□ 1.12
CDK4-215ENST00000553237 KCNQ2O43526 872 aa22.04■■□□□ 1.12
CDK4-215ENST00000553237 ACSBG1Q96GR2 724 aa22.04■■□□□ 1.12
CDK4-215ENST00000553237 BCL9O00512 1426 aa22.04■■□□□ 1.12
CDK4-215ENST00000553237 SBF2Q86WG5 1849 aa22.03■■□□□ 1.12
CDK4-215ENST00000553237 MYOM1P52179 1685 aa22.02■■□□□ 1.12
CDK4-215ENST00000553237 DDX54Q8TDD1 881 aaKnown RBP22.01■■□□□ 1.11
CDK4-215ENST00000553237 RREB1Q92766 1687 aa22.01■■□□□ 1.11
CDK4-215ENST00000553237 RTL1A6NKG5 1358 aa21.99■■□□□ 1.11
CDK4-215ENST00000553237 HSP90AB2PQ58FF8 381 aa21.99■■□□□ 1.11
CDK4-215ENST00000553237 PROM2Q8N271 834 aa21.99■■□□□ 1.11
CDK4-215ENST00000553237 NUP188Q5SRE5 1749 aa21.99■■□□□ 1.11
CDK4-215ENST00000553237 NBPF6Q5VWK0 638 aa21.98■■□□□ 1.11
CDK4-215ENST00000553237 USHBP1Q8N6Y0 703 aa21.98■■□□□ 1.11
CDK4-215ENST00000553237 NBPF4Q96M43 638 aa21.98■■□□□ 1.11
CDK4-215ENST00000553237 KIF20BQ96Q89 1820 aa21.98■■□□□ 1.11
CDK4-215ENST00000553237 EMILIN1Q9Y6C2 1016 aa21.96■■□□□ 1.11
CDK4-215ENST00000553237 CGNL1Q0VF96 1302 aa21.96■■□□□ 1.11
CDK4-215ENST00000553237 PPM1GO15355 546 aaPredicted RBP21.95■■□□□ 1.1
CDK4-215ENST00000553237 TXNRD1Q16881 649 aa21.95■■□□□ 1.1
CDK4-215ENST00000553237 ANO8Q9HCE9 1232 aaPredicted RBP21.95■■□□□ 1.1
CDK4-215ENST00000553237 LRP5O75197 1615 aa21.95■■□□□ 1.1
CDK4-215ENST00000553237 FAM208AQ9UK61 1670 aaKnown RBP21.95■■□□□ 1.1
CDK4-215ENST00000553237 INSRP06213 1382 aa21.94■■□□□ 1.1
CDK4-215ENST00000553237 FLT4P35916 1363 aa21.94■■□□□ 1.1
CDK4-215ENST00000553237 RGPD2P0DJD1 1756 aa21.94■■□□□ 1.1
CDK4-215ENST00000553237 SMG6Q86US8 1419 aaKnown RBP21.93■■□□□ 1.1
CDK4-215ENST00000553237 ZCRB1Q8TBF4 217 aaKnown RBP21.93■■□□□ 1.1
CDK4-215ENST00000553237 PANK3Q9H999 370 aa21.93■■□□□ 1.1
CDK4-215ENST00000553237 MEGF6O75095 1541 aa21.91■■□□□ 1.1
CDK4-215ENST00000553237 KAT6BQ8WYB5 2073 aa21.91■■□□□ 1.1
CDK4-215ENST00000553237 TNNT2P45379 298 aaPredicted RBP21.91■■□□□ 1.1
CDK4-215ENST00000553237 RGPD3A6NKT7 1758 aaPredicted RBP21.91■■□□□ 1.1
CDK4-215ENST00000553237 RGPD4Q7Z3J3 1758 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms