RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ZNF526Q8TF50 670 aaPredicted RBP7.76□□□□□ -1.17
CKAP4-203ENST00000553039 ATP10DQ9P241 1426 aa7.76□□□□□ -1.17
CKAP4-203ENST00000553039 NRKQ7Z2Y5 1582 aa7.76□□□□□ -1.17
CKAP4-203ENST00000553039 TNS1Q9HBL0 1735 aaKnown RBP7.75□□□□□ -1.17
CKAP4-203ENST00000553039 ANKRD30BQ9BXX2 1392 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 PLEKHH1Q9ULM0 1364 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 COL14A1Q05707 1796 aaKnown RBP7.75□□□□□ -1.17
CKAP4-203ENST00000553039 SAFB2Q14151 953 aaKnown RBP eCLIP7.75□□□□□ -1.17
CKAP4-203ENST00000553039 RGL3Q3MIN7 710 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 MIER1Q8N108 512 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 KLRG1Q96E93 195 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 PRAM1Q96QH2 718 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 ZBTB47Q9UFB7 747 aaPredicted RBP7.75□□□□□ -1.17
CKAP4-203ENST00000553039 WWC3Q9ULE0 1092 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 SSUH2Q9Y2M2 353 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 E9PCH4 1651 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 OVOS2A0A0G2JMS6 1433 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 OVOS2A0A0J9YW53 1432 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 TECPR2O15040 1411 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 OVOS2Q6IE36 1432 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 ADGRF5Q8IZF2 1346 aa7.75□□□□□ -1.17
CKAP4-203ENST00000553039 CROCC2H7BZ55 1655 aa7.74□□□□□ -1.17
CKAP4-203ENST00000553039 KIF1AQ12756 1690 aa7.74□□□□□ -1.17
CKAP4-203ENST00000553039 PLCH1Q4KWH8 1693 aa7.74□□□□□ -1.17
CKAP4-203ENST00000553039 THSD7AQ9UPZ6 1657 aa7.74□□□□□ -1.17
CKAP4-203ENST00000553039 HMGB2P26583 209 aaKnown RBP7.74□□□□□ -1.17
CKAP4-203ENST00000553039 TOM1L2Q6ZVM7 507 aa7.74□□□□□ -1.17
CKAP4-203ENST00000553039 JMYQ8N9B5 988 aa7.74□□□□□ -1.17
CKAP4-203ENST00000553039 EIF3AQ14152 1382 aaKnown RBP7.73□□□□□ -1.17
CKAP4-203ENST00000553039 SSH2Q76I76 1423 aa7.73□□□□□ -1.17
CKAP4-203ENST00000553039 YBX3P16989 372 aaKnown RBP eCLIP7.73□□□□□ -1.17
CKAP4-203ENST00000553039 ITGAEP38570 1179 aa7.73□□□□□ -1.17
CKAP4-203ENST00000553039 NUTM2GQ5VZR2 741 aa7.73□□□□□ -1.17
CKAP4-203ENST00000553039 PTF1AQ7RTS3 328 aa7.73□□□□□ -1.17
CKAP4-203ENST00000553039 NLRP13Q86W25 1043 aa7.73□□□□□ -1.17
CKAP4-203ENST00000553039 ABTB2Q8N961 1025 aa7.73□□□□□ -1.17
CKAP4-203ENST00000553039 MARCH10Q8NA82 808 aaPredicted RBP7.73□□□□□ -1.17
CKAP4-203ENST00000553039 ZNF692Q9BU19 519 aaPredicted RBP7.73□□□□□ -1.17
CKAP4-203ENST00000553039 C14orf93Q9H972 538 aaKnown RBP7.73□□□□□ -1.17
CKAP4-203ENST00000553039 UTRNP46939 3433 aa7.72□□□□□ -1.17
CKAP4-203ENST00000553039 ANKARQ7Z5J8 1434 aa7.72□□□□□ -1.17
CKAP4-203ENST00000553039 SPDYE2BA6NHP3 402 aa7.72□□□□□ -1.17
CKAP4-203ENST00000553039 KIF3CO14782 793 aa7.72□□□□□ -1.17
CKAP4-203ENST00000553039 SPDYE6P0CI01 402 aa7.72□□□□□ -1.17
CKAP4-203ENST00000553039 SPDYE2Q495Y8 402 aa7.72□□□□□ -1.17
CKAP4-203ENST00000553039 NLGN2Q8NFZ4 835 aa7.72□□□□□ -1.17
CKAP4-203ENST00000553039 TFCP2L1Q9NZI6 479 aa7.72□□□□□ -1.17
CKAP4-203ENST00000553039 CIZ1Q9ULV3 898 aaPredicted RBP7.72□□□□□ -1.17
CKAP4-203ENST00000553039 CD2APQ9Y5K6 639 aa7.72□□□□□ -1.17
CKAP4-203ENST00000553039 RREB1Q92766 1687 aa7.72□□□□□ -1.17
CKAP4-203ENST00000553039 NUP188Q5SRE5 1749 aa7.72□□□□□ -1.17
CKAP4-203ENST00000553039 WASLO00401 505 aaPredicted RBP7.71□□□□□ -1.18
CKAP4-203ENST00000553039 GCP02774 474 aa7.71□□□□□ -1.18
CKAP4-203ENST00000553039 C16orf71Q8IYS4 520 aaPredicted RBP7.71□□□□□ -1.18
CKAP4-203ENST00000553039 BCL9O00512 1426 aa7.7□□□□□ -1.18
CKAP4-203ENST00000553039 YTHDC2Q9H6S0 1430 aaKnown RBP7.7□□□□□ -1.18
CKAP4-203ENST00000553039 SLC27A3Q5K4L6 730 aa7.7□□□□□ -1.18
CKAP4-203ENST00000553039 HIRIP3Q9BW71 556 aaPredicted RBP7.7□□□□□ -1.18
CKAP4-203ENST00000553039 FSTL1Q12841 308 aa7.69□□□□□ -1.18
CKAP4-203ENST00000553039 RBM46Q8TBY0 533 aaKnown RBP7.69□□□□□ -1.18
CKAP4-203ENST00000553039 MYOM1P52179 1685 aa7.69□□□□□ -1.18
CKAP4-203ENST00000553039 CPDO75976 1380 aa7.69□□□□□ -1.18
CKAP4-203ENST00000553039 NRAPQ86VF7 1730 aa7.69□□□□□ -1.18
CKAP4-203ENST00000553039 ZBTB7CA1YPR0 619 aa7.68□□□□□ -1.18
CKAP4-203ENST00000553039 CFAP70Q5T0N1 1121 aa7.68□□□□□ -1.18
CKAP4-203ENST00000553039 AKT1S1Q96B36 256 aa7.68□□□□□ -1.18
CKAP4-203ENST00000553039 NUDT16Q96DE0 195 aaKnown RBP7.68□□□□□ -1.18
CKAP4-203ENST00000553039 CRB1P82279 1406 aa7.68□□□□□ -1.18
CKAP4-203ENST00000553039 CASZ1Q86V15 1759 aa7.67□□□□□ -1.18
CKAP4-203ENST00000553039 CSB-PGBD3P0DP91 1061 aa7.67□□□□□ -1.18
CKAP4-203ENST00000553039 RNF39Q9H2S5 420 aa7.67□□□□□ -1.18
CKAP4-203ENST00000553039 LOC105371045A0A1W2PR82 267 aa7.66□□□□□ -1.18
CKAP4-203ENST00000553039 GTPBP6O43824 516 aaPredicted RBP7.66□□□□□ -1.18
CKAP4-203ENST00000553039 NKX1-1Q15270 411 aaPredicted RBP7.66□□□□□ -1.18
CKAP4-203ENST00000553039 ZNF827Q17R98 1081 aa7.66□□□□□ -1.18
CKAP4-203ENST00000553039 RNF25Q96BH1 459 aaPredicted RBP7.66□□□□□ -1.18
CKAP4-203ENST00000553039 ACSBG1Q96GR2 724 aa7.66□□□□□ -1.18
CKAP4-203ENST00000553039 CARD10Q9BWT7 1032 aa7.66□□□□□ -1.18
CKAP4-203ENST00000553039 CCDC61Q9Y6R9 512 aa7.66□□□□□ -1.18
CKAP4-203ENST00000553039 MINK1Q8N4C8 1332 aaPredicted RBP7.66□□□□□ -1.18
CKAP4-203ENST00000553039 SHANK3Q9BYB0 1731 aa7.66□□□□□ -1.18
CKAP4-203ENST00000553039 FMN2Q9NZ56 1722 aa7.66□□□□□ -1.18
CKAP4-203ENST00000553039 PLEKHG3A1L390 1219 aa7.65□□□□□ -1.18
CKAP4-203ENST00000553039 FLAD1Q8NFF5 587 aa7.65□□□□□ -1.18
CKAP4-203ENST00000553039 PRR36Q9H6K5 1346 aa7.65□□□□□ -1.18
CKAP4-203ENST00000553039 LRRC4BQ9NT99 713 aa7.65□□□□□ -1.18
CKAP4-203ENST00000553039 TRAK1Q9UPV9 953 aa7.65□□□□□ -1.18
CKAP4-203ENST00000553039 ATP7BP35670 1465 aa7.64□□□□□ -1.19
CKAP4-203ENST00000553039 ADCY9O60503 1353 aa7.64□□□□□ -1.19
CKAP4-203ENST00000553039 BRD4O60885 1362 aaPredicted RBP7.64□□□□□ -1.19
CKAP4-203ENST00000553039 ACEP12821 1306 aa7.64□□□□□ -1.19
CKAP4-203ENST00000553039 PNPLA7Q6ZV29 1317 aa7.64□□□□□ -1.19
CKAP4-203ENST00000553039 WDR17Q8IZU2 1322 aa7.64□□□□□ -1.19
CKAP4-203ENST00000553039 KIF1BO60333 1816 aa7.64□□□□□ -1.19
CKAP4-203ENST00000553039 HSPA1AP0DMV8 641 aaKnown RBP7.63□□□□□ -1.19
CKAP4-203ENST00000553039 HSPA1BP0DMV9 641 aaKnown RBP7.63□□□□□ -1.19
CKAP4-203ENST00000553039 NLRP6P59044 892 aa7.63□□□□□ -1.19
CKAP4-203ENST00000553039 GSE1Q14687 1217 aa7.63□□□□□ -1.19
CKAP4-203ENST00000553039 CDK19Q9BWU1 502 aa7.63□□□□□ -1.19
CKAP4-203ENST00000553039 CLTCL1P53675 1640 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms