RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 FMN2Q9NZ56 1722 aa9.59□□□□□ -0.87
LINC02406-201ENST00000553029 SSH2Q76I76 1423 aa9.58□□□□□ -0.88
LINC02406-201ENST00000553029 YBX3P16989 372 aaKnown RBP eCLIP9.58□□□□□ -0.88
LINC02406-201ENST00000553029 CHRNA2Q15822 529 aa9.58□□□□□ -0.88
LINC02406-201ENST00000553029 TXNRD1Q16881 649 aa9.58□□□□□ -0.88
LINC02406-201ENST00000553029 STK26Q9P289 416 aa9.58□□□□□ -0.88
LINC02406-201ENST00000553029 WWC3Q9ULE0 1092 aa9.58□□□□□ -0.88
LINC02406-201ENST00000553029 KIF3CO14782 793 aa9.57□□□□□ -0.88
LINC02406-201ENST00000553029 EVA1CP58658 441 aa9.57□□□□□ -0.88
LINC02406-201ENST00000553029 JMYQ8N9B5 988 aa9.57□□□□□ -0.88
LINC02406-201ENST00000553029 NLGN2Q8NFZ4 835 aa9.57□□□□□ -0.88
LINC02406-201ENST00000553029 PMFBP1Q8TBY8 1022 aa9.57□□□□□ -0.88
LINC02406-201ENST00000553029 KLRG1Q96E93 195 aa9.57□□□□□ -0.88
LINC02406-201ENST00000553029 THRAP3Q9Y2W1 955 aaKnown RBP9.57□□□□□ -0.88
LINC02406-201ENST00000553029 VPS8Q8N3P4 1428 aa9.56□□□□□ -0.88
LINC02406-201ENST00000553029 POLD1P28340 1107 aa9.56□□□□□ -0.88
LINC02406-201ENST00000553029 PTF1AQ7RTS3 328 aa9.56□□□□□ -0.88
LINC02406-201ENST00000553029 GPRASP1Q5JY77 1395 aa9.55□□□□□ -0.88
LINC02406-201ENST00000553029 ABCC11Q96J66 1382 aa9.55□□□□□ -0.88
LINC02406-201ENST00000553029 MNX1P50219 401 aaPredicted RBP9.55□□□□□ -0.88
LINC02406-201ENST00000553029 LARP1Q6PKG0 1096 aaKnown RBP9.55□□□□□ -0.88
LINC02406-201ENST00000553029 RPGRIP1LQ68CZ1 1315 aa9.55□□□□□ -0.88
LINC02406-201ENST00000553029 ATP7BP35670 1465 aa9.53□□□□□ -0.88
LINC02406-201ENST00000553029 CLTCL1P53675 1640 aa9.53□□□□□ -0.88
LINC02406-201ENST00000553029 ACIN1Q9UKV3 1341 aaKnown RBP9.53□□□□□ -0.88
LINC02406-201ENST00000553029 TOMM70O94826 608 aa9.52□□□□□ -0.89
LINC02406-201ENST00000553029 FAM50AQ14320 339 aaKnown RBP9.52□□□□□ -0.89
LINC02406-201ENST00000553029 ANKARQ7Z5J8 1434 aa9.52□□□□□ -0.89
LINC02406-201ENST00000553029 PEAK1Q9H792 1746 aa9.51□□□□□ -0.89
LINC02406-201ENST00000553029 BCL9O00512 1426 aa9.51□□□□□ -0.89
LINC02406-201ENST00000553029 PAK3O75914 559 aaPredicted RBP9.51□□□□□ -0.89
LINC02406-201ENST00000553029 ZC3H6P61129 1189 aaKnown RBP9.51□□□□□ -0.89
LINC02406-201ENST00000553029 DDB1Q16531 1140 aa9.51□□□□□ -0.89
LINC02406-201ENST00000553029 SLC16A10Q8TF71 515 aa9.51□□□□□ -0.89
LINC02406-201ENST00000553029 ALS2Q96Q42 1657 aa9.51□□□□□ -0.89
LINC02406-201ENST00000553029 TRPM3Q9HCF6 1732 aaPredicted RBP9.51□□□□□ -0.89
LINC02406-201ENST00000553029 PARP4Q9UKK3 1724 aaKnown RBP9.5□□□□□ -0.89
LINC02406-201ENST00000553029 CD44P16070 742 aaKnown RBP9.49□□□□□ -0.89
LINC02406-201ENST00000553029 HTRA3P83110 453 aa9.49□□□□□ -0.89
LINC02406-201ENST00000553029 ZNF827Q17R98 1081 aa9.49□□□□□ -0.89
LINC02406-201ENST00000553029 YTHDC2Q9H6S0 1430 aaKnown RBP9.48□□□□□ -0.89
LINC02406-201ENST00000553029 CRYBG1Q9Y4K1 1723 aa9.48□□□□□ -0.89
LINC02406-201ENST00000553029 GABBR2O75899 941 aa9.48□□□□□ -0.89
LINC02406-201ENST00000553029 HSPA1AP0DMV8 641 aaKnown RBP9.48□□□□□ -0.89
LINC02406-201ENST00000553029 HSPA1BP0DMV9 641 aaKnown RBP9.48□□□□□ -0.89
LINC02406-201ENST00000553029 TMEM132EQ6IEE7 984 aa9.48□□□□□ -0.89
LINC02406-201ENST00000553029 SIRT1Q96EB6 747 aa9.48□□□□□ -0.89
LINC02406-201ENST00000553029 ROCK1Q13464 1354 aa9.48□□□□□ -0.89
LINC02406-201ENST00000553029 ADGRF5Q8IZF2 1346 aa9.47□□□□□ -0.89
LINC02406-201ENST00000553029 KNDC1Q76NI1 1749 aa9.47□□□□□ -0.89
LINC02406-201ENST00000553029 CRB1P82279 1406 aa9.47□□□□□ -0.89
LINC02406-201ENST00000553029 LRRC37A3O60309 1634 aa9.46□□□□□ -0.89
LINC02406-201ENST00000553029 MARCH10Q8NA82 808 aaPredicted RBP9.46□□□□□ -0.9
LINC02406-201ENST00000553029 NGDNQ8NEJ9 315 aaKnown RBP9.46□□□□□ -0.9
LINC02406-201ENST00000553029 CPDO75976 1380 aa9.46□□□□□ -0.9
LINC02406-201ENST00000553029 TNS2Q63HR2 1409 aa9.46□□□□□ -0.9
LINC02406-201ENST00000553029 PAPPAQ13219 1627 aa9.45□□□□□ -0.9
LINC02406-201ENST00000553029 IFT172Q9UG01 1749 aa9.45□□□□□ -0.9
LINC02406-201ENST00000553029 SAFB2Q14151 953 aaKnown RBP eCLIP9.45□□□□□ -0.9
LINC02406-201ENST00000553029 FKBP8Q14318 412 aa9.45□□□□□ -0.9
LINC02406-201ENST00000553029 FAM161AQ3B820 660 aa9.45□□□□□ -0.9
LINC02406-201ENST00000553029 EIF3AQ14152 1382 aaKnown RBP9.45□□□□□ -0.9
LINC02406-201ENST00000553029 ANKRD30BQ9BXX2 1392 aa9.45□□□□□ -0.9
LINC02406-201ENST00000553029 COL5A2P05997 1499 aaPredicted RBP9.45□□□□□ -0.9
LINC02406-201ENST00000553029 TULP4Q9NRJ4 1543 aa9.45□□□□□ -0.9
LINC02406-201ENST00000553029 TOPAZ1Q8N9V7 1692 aa9.45□□□□□ -0.9
LINC02406-201ENST00000553029 WDR90Q96KV7 1748 aa9.45□□□□□ -0.9
LINC02406-201ENST00000553029 RBM46Q8TBY0 533 aaKnown RBP9.44□□□□□ -0.9
LINC02406-201ENST00000553029 PRAM1Q96QH2 718 aa9.44□□□□□ -0.9
LINC02406-201ENST00000553029 PCNTO95613 3336 aa9.44□□□□□ -0.9
LINC02406-201ENST00000553029 PHRF1Q9P1Y6 1649 aaKnown RBP9.43□□□□□ -0.9
LINC02406-201ENST00000553029 PNPLA7Q6ZV29 1317 aa9.43□□□□□ -0.9
LINC02406-201ENST00000553029 PRR36Q9H6K5 1346 aa9.43□□□□□ -0.9
LINC02406-201ENST00000553029 NUTM2GQ5VZR2 741 aa9.43□□□□□ -0.9
LINC02406-201ENST00000553029 CDCA7Q9BWT1 371 aaPredicted RBP9.43□□□□□ -0.9
LINC02406-201ENST00000553029 KIF1BO60333 1816 aa9.42□□□□□ -0.9
LINC02406-201ENST00000553029 BRD4O60885 1362 aaPredicted RBP9.42□□□□□ -0.9
LINC02406-201ENST00000553029 ZNF579Q8NAF0 562 aaKnown RBP9.42□□□□□ -0.9
LINC02406-201ENST00000553029 RGPD8O14715 1765 aaPredicted RBP9.42□□□□□ -0.9
LINC02406-201ENST00000553029 LMO7Q8WWI1 1683 aa9.42□□□□□ -0.9
LINC02406-201ENST00000553029 PIK3C2GO75747 1445 aa9.41□□□□□ -0.9
LINC02406-201ENST00000553029 SBF2Q86WG5 1849 aa9.41□□□□□ -0.9
LINC02406-201ENST00000553029 FSTL1Q12841 308 aa9.41□□□□□ -0.9
LINC02406-201ENST00000553029 TOM1L2Q6ZVM7 507 aa9.41□□□□□ -0.9
LINC02406-201ENST00000553029 CD2APQ9Y5K6 639 aa9.41□□□□□ -0.9
LINC02406-201ENST00000553029 PPLO60437 1756 aa9.4□□□□□ -0.9
LINC02406-201ENST00000553029 C16orf71Q8IYS4 520 aaPredicted RBP9.4□□□□□ -0.9
LINC02406-201ENST00000553029 NMRK2Q9NPI5 230 aa9.4□□□□□ -0.9
LINC02406-201ENST00000553029 LRRC4BQ9NT99 713 aa9.4□□□□□ -0.9
LINC02406-201ENST00000553029 POGKQ9P215 609 aa9.4□□□□□ -0.9
LINC02406-201ENST00000553029 TFCP2L1Q9NZI6 479 aa9.39□□□□□ -0.91
LINC02406-201ENST00000553029 USP19O94966 1318 aa9.38□□□□□ -0.91
LINC02406-201ENST00000553029 ACSBG1Q96GR2 724 aa9.38□□□□□ -0.91
LINC02406-201ENST00000553029 HIRIP3Q9BW71 556 aaPredicted RBP9.38□□□□□ -0.91
LINC02406-201ENST00000553029 COL24A1Q17RW2 1714 aa9.37□□□□□ -0.91
LINC02406-201ENST00000553029 ARHGEF28Q8N1W1 1705 aaKnown RBP9.37□□□□□ -0.91
LINC02406-201ENST00000553029 EXOC5O00471 708 aa9.37□□□□□ -0.91
LINC02406-201ENST00000553029 SLC27A3Q5K4L6 730 aa9.37□□□□□ -0.91
LINC02406-201ENST00000553029 IGSF1Q8N6C5 1336 aa9.36□□□□□ -0.91
LINC02406-201ENST00000553029 ZBTB7CA1YPR0 619 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms