RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 CRYBG1Q9Y4K1 1723 aa13.19□□□□□ -0.3
PRKCH-203ENST00000552875 TOM1L2Q6ZVM7 507 aa13.18□□□□□ -0.3
PRKCH-203ENST00000552875 MARCH10Q8NA82 808 aaPredicted RBP13.18□□□□□ -0.3
PRKCH-203ENST00000552875 PIK3C2GO75747 1445 aa13.17□□□□□ -0.3
PRKCH-203ENST00000552875 NUTM2GQ5VZR2 741 aa13.17□□□□□ -0.3
PRKCH-203ENST00000552875 COL5A2P05997 1499 aaPredicted RBP13.16□□□□□ -0.3
PRKCH-203ENST00000552875 ITGAEP38570 1179 aa13.16□□□□□ -0.3
PRKCH-203ENST00000552875 RGL3Q3MIN7 710 aa13.16□□□□□ -0.3
PRKCH-203ENST00000552875 SBF2Q86WG5 1849 aa13.16□□□□□ -0.3
PRKCH-203ENST00000552875 PHRF1Q9P1Y6 1649 aaKnown RBP13.15□□□□□ -0.3
PRKCH-203ENST00000552875 LRRC37A3O60309 1634 aa13.14□□□□□ -0.31
PRKCH-203ENST00000552875 EXOC5O00471 708 aa13.14□□□□□ -0.31
PRKCH-203ENST00000552875 ZNF827Q17R98 1081 aa13.14□□□□□ -0.31
PRKCH-203ENST00000552875 ABTB2Q8N961 1025 aa13.14□□□□□ -0.31
PRKCH-203ENST00000552875 HIRIP3Q9BW71 556 aaPredicted RBP13.14□□□□□ -0.31
PRKCH-203ENST00000552875 C14orf93Q9H972 538 aaKnown RBP13.14□□□□□ -0.31
PRKCH-203ENST00000552875 TFCP2L1Q9NZI6 479 aa13.14□□□□□ -0.31
PRKCH-203ENST00000552875 BRD4O60885 1362 aaPredicted RBP13.14□□□□□ -0.31
PRKCH-203ENST00000552875 TOPAZ1Q8N9V7 1692 aa13.14□□□□□ -0.31
PRKCH-203ENST00000552875 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
PRKCH-203ENST00000552875 WASLO00401 505 aaPredicted RBP13.13□□□□□ -0.31
PRKCH-203ENST00000552875 C16orf71Q8IYS4 520 aaPredicted RBP13.13□□□□□ -0.31
PRKCH-203ENST00000552875 CD2APQ9Y5K6 639 aa13.13□□□□□ -0.31
PRKCH-203ENST00000552875 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
PRKCH-203ENST00000552875 GCP02774 474 aa13.12□□□□□ -0.31
PRKCH-203ENST00000552875 NLRP13Q86W25 1043 aa13.12□□□□□ -0.31
PRKCH-203ENST00000552875 LMO7Q8WWI1 1683 aa13.12□□□□□ -0.31
PRKCH-203ENST00000552875 SLC27A3Q5K4L6 730 aa13.11□□□□□ -0.31
PRKCH-203ENST00000552875 RBM46Q8TBY0 533 aaKnown RBP13.11□□□□□ -0.31
PRKCH-203ENST00000552875 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
PRKCH-203ENST00000552875 SLC4A1APQ9BWU0 796 aaKnown RBP13.11□□□□□ -0.31
PRKCH-203ENST00000552875 PNPLA7Q6ZV29 1317 aa13.11□□□□□ -0.31
PRKCH-203ENST00000552875 ZBTB7CA1YPR0 619 aa13.1□□□□□ -0.31
PRKCH-203ENST00000552875 USP19O94966 1318 aa13.1□□□□□ -0.31
PRKCH-203ENST00000552875 MINK1Q8N4C8 1332 aaPredicted RBP13.1□□□□□ -0.31
PRKCH-203ENST00000552875 FSTL1Q12841 308 aa13.09□□□□□ -0.31
PRKCH-203ENST00000552875 PAPPAQ13219 1627 aa13.09□□□□□ -0.31
PRKCH-203ENST00000552875 MSH5O43196 834 aa13.08□□□□□ -0.32
PRKCH-203ENST00000552875 HSPA1AP0DMV8 641 aaKnown RBP13.08□□□□□ -0.32
PRKCH-203ENST00000552875 HSPA1BP0DMV9 641 aaKnown RBP13.08□□□□□ -0.32
PRKCH-203ENST00000552875 WDR17Q8IZU2 1322 aa13.08□□□□□ -0.32
PRKCH-203ENST00000552875 WDR90Q96KV7 1748 aa13.08□□□□□ -0.32
PRKCH-203ENST00000552875 CFAP70Q5T0N1 1121 aa13.07□□□□□ -0.32
PRKCH-203ENST00000552875 NUDT16Q96DE0 195 aaKnown RBP13.07□□□□□ -0.32
PRKCH-203ENST00000552875 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
PRKCH-203ENST00000552875 LRRC4BQ9NT99 713 aa13.07□□□□□ -0.32
PRKCH-203ENST00000552875 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
PRKCH-203ENST00000552875 HTRA3P83110 453 aa13.06□□□□□ -0.32
PRKCH-203ENST00000552875 USP6P35125 1406 aa13.05□□□□□ -0.32
PRKCH-203ENST00000552875 AKAP12Q02952 1782 aa13.05□□□□□ -0.32
PRKCH-203ENST00000552875 CARD10Q9BWT7 1032 aa13.05□□□□□ -0.32
PRKCH-203ENST00000552875 SPATA31E1Q6ZUB1 1445 aa13.05□□□□□ -0.32
PRKCH-203ENST00000552875 TRAK1Q9UPV9 953 aa13.04□□□□□ -0.32
PRKCH-203ENST00000552875 ACEP12821 1306 aa13.04□□□□□ -0.32
PRKCH-203ENST00000552875 POLR3AO14802 1390 aaPredicted RBP13.04□□□□□ -0.32
PRKCH-203ENST00000552875 COL24A1Q17RW2 1714 aa13.03□□□□□ -0.32
PRKCH-203ENST00000552875 TNS2Q63HR2 1409 aa13.03□□□□□ -0.32
PRKCH-203ENST00000552875 ARHGEF28Q8N1W1 1705 aaKnown RBP13.02□□□□□ -0.32
PRKCH-203ENST00000552875 HMGB2P26583 209 aaKnown RBP13.02□□□□□ -0.33
PRKCH-203ENST00000552875 CCDC7Q96M83 1385 aa13.02□□□□□ -0.33
PRKCH-203ENST00000552875 NHSQ6T4R5 1651 aa13.02□□□□□ -0.33
PRKCH-203ENST00000552875 NMRK2Q9NPI5 230 aa13.01□□□□□ -0.33
PRKCH-203ENST00000552875 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
PRKCH-203ENST00000552875 IGSF1Q8N6C5 1336 aa13.01□□□□□ -0.33
PRKCH-203ENST00000552875 QSER1Q2KHR3 1735 aa13.01□□□□□ -0.33
PRKCH-203ENST00000552875 ITSN1Q15811 1721 aa13□□□□□ -0.33
PRKCH-203ENST00000552875 FAM161AQ3B820 660 aa13□□□□□ -0.33
PRKCH-203ENST00000552875 PCNTO95613 3336 aa12.99□□□□□ -0.33
PRKCH-203ENST00000552875 MSL1Q68DK7 614 aa12.99□□□□□ -0.33
PRKCH-203ENST00000552875 PLEKHG3A1L390 1219 aa12.98□□□□□ -0.33
PRKCH-203ENST00000552875 NLRP6P59044 892 aa12.98□□□□□ -0.33
PRKCH-203ENST00000552875 SMC1BQ8NDV3 1235 aa12.98□□□□□ -0.33
PRKCH-203ENST00000552875 FLAD1Q8NFF5 587 aa12.98□□□□□ -0.33
PRKCH-203ENST00000552875 LOC105371045A0A1W2PR82 267 aa12.97□□□□□ -0.33
PRKCH-203ENST00000552875 COL23A1Q86Y22 540 aaPredicted RBP12.97□□□□□ -0.33
PRKCH-203ENST00000552875 AXIN2Q9Y2T1 843 aa12.97□□□□□ -0.33
PRKCH-203ENST00000552875 PPIP5K1Q6PFW1 1433 aa12.96□□□□□ -0.33
PRKCH-203ENST00000552875 KDM2BQ8NHM5 1336 aa12.96□□□□□ -0.33
PRKCH-203ENST00000552875 CDK19Q9BWU1 502 aa12.96□□□□□ -0.33
PRKCH-203ENST00000552875 ABCC6O95255 1503 aa12.95□□□□□ -0.34
PRKCH-203ENST00000552875 MLLT1Q03111 559 aaPredicted RBP12.95□□□□□ -0.34
PRKCH-203ENST00000552875 KCNH5Q8NCM2 988 aa12.95□□□□□ -0.34
PRKCH-203ENST00000552875 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
PRKCH-203ENST00000552875 WNK3Q9BYP7 1800 aa12.95□□□□□ -0.34
PRKCH-203ENST00000552875 IL2RBP14784 551 aa12.94□□□□□ -0.34
PRKCH-203ENST00000552875 PRDM10Q9NQV6 1147 aa12.94□□□□□ -0.34
PRKCH-203ENST00000552875 CCNL1Q9UK58 526 aaPredicted RBP12.94□□□□□ -0.34
PRKCH-203ENST00000552875 PLEKHG2Q9H7P9 1386 aa12.94□□□□□ -0.34
PRKCH-203ENST00000552875 SYTL4Q96C24 671 aaPredicted RBP12.93□□□□□ -0.34
PRKCH-203ENST00000552875 CPSF1Q10570 1443 aaKnown RBP12.93□□□□□ -0.34
PRKCH-203ENST00000552875 BTAF1O14981 1849 aa12.92□□□□□ -0.34
PRKCH-203ENST00000552875 KCNQ4P56696 695 aa12.92□□□□□ -0.34
PRKCH-203ENST00000552875 ADRA2BP18089 450 aa12.91□□□□□ -0.34
PRKCH-203ENST00000552875 ARHGEF25Q86VW2 580 aa12.91□□□□□ -0.34
PRKCH-203ENST00000552875 CICQ96RK0 1608 aaPredicted RBP12.91□□□□□ -0.34
PRKCH-203ENST00000552875 C10orf71Q711Q0 1435 aa12.9□□□□□ -0.34
PRKCH-203ENST00000552875 SLIT3O75094 1523 aa12.9□□□□□ -0.34
PRKCH-203ENST00000552875 ARHGAP27Q6ZUM4 889 aa12.9□□□□□ -0.34
PRKCH-203ENST00000552875 ADGRB1O14514 1584 aa12.9□□□□□ -0.35
PRKCH-203ENST00000552875 AIDAQ96BJ3 306 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms