RNA–Protein interactions for RNA: ENST00000552610.1

RAB3IP-217, Transcript of RAB3A interacting protein, humanhuman

TSL 2

Gene RAB3IP, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-217ENST00000552610 KCTD15Q96SI1 283 aaPredicted RBP10.29□□□□□ -0.76
RAB3IP-217ENST00000552610 KLF16Q9BXK1 252 aaPredicted RBP10.29□□□□□ -0.76
RAB3IP-217ENST00000552610 TIMP2P16035 220 aa10.28□□□□□ -0.76
RAB3IP-217ENST00000552610 PRM3Q9NNZ6 103 aa10.28□□□□□ -0.76
RAB3IP-217ENST00000552610 CDV3Q9UKY7 258 aaKnown RBP10.28□□□□□ -0.76
RAB3IP-217ENST00000552610 PCDHB9Q9Y5E1 797 aa10.28□□□□□ -0.76
RAB3IP-217ENST00000552610 WDR4P57081 412 aaKnown RBP10.26□□□□□ -0.77
RAB3IP-217ENST00000552610 INTS6LQ5JSJ4 861 aaKnown RBP10.26□□□□□ -0.77
RAB3IP-217ENST00000552610 ITPKCQ96DU7 683 aa10.26□□□□□ -0.77
RAB3IP-217ENST00000552610 CAPN5O15484 640 aaPredicted RBP10.25□□□□□ -0.77
RAB3IP-217ENST00000552610 NBPF20Q3BBV1 942 aa10.25□□□□□ -0.77
RAB3IP-217ENST00000552610 CCDC116Q8IYX3 515 aa10.25□□□□□ -0.77
RAB3IP-217ENST00000552610 ZFAND3Q9H8U3 227 aa10.25□□□□□ -0.77
RAB3IP-217ENST00000552610 ESPNB1AK53 854 aa10.24□□□□□ -0.77
RAB3IP-217ENST00000552610 ZIC2O95409 532 aaPredicted RBP10.24□□□□□ -0.77
RAB3IP-217ENST00000552610 UBTFP17480 764 aaKnown RBP10.24□□□□□ -0.77
RAB3IP-217ENST00000552610 VAC14Q08AM6 782 aa10.24□□□□□ -0.77
RAB3IP-217ENST00000552610 BMP1P13497 986 aa10.22□□□□□ -0.77
RAB3IP-217ENST00000552610 RAB15P59190 212 aa10.22□□□□□ -0.77
RAB3IP-217ENST00000552610 PPP1R26Q5T8A7 1209 aaPredicted RBP10.22□□□□□ -0.77
RAB3IP-217ENST00000552610 ATP13A2Q9NQ11 1180 aa10.22□□□□□ -0.77
RAB3IP-217ENST00000552610 POTECB2RU33 542 aa10.21□□□□□ -0.77
RAB3IP-217ENST00000552610 GIGYF1O75420 1035 aaPredicted RBP10.21□□□□□ -0.77
RAB3IP-217ENST00000552610 TRIM46Q7Z4K8 759 aa10.21□□□□□ -0.77
RAB3IP-217ENST00000552610 ZNF330Q9Y3S2 320 aaPredicted RBP10.21□□□□□ -0.77
RAB3IP-217ENST00000552610 CLUAP1Q96AJ1 413 aa10.2□□□□□ -0.78
RAB3IP-217ENST00000552610 TMPRSS4Q9NRS4 437 aa10.2□□□□□ -0.78
RAB3IP-217ENST00000552610 EMILIN1Q9Y6C2 1016 aa10.2□□□□□ -0.78
RAB3IP-217ENST00000552610 ERVH48-1M5A8F1 160 aa10.19□□□□□ -0.78
RAB3IP-217ENST00000552610 GMPR2Q9P2T1 348 aaKnown RBP10.19□□□□□ -0.78
RAB3IP-217ENST00000552610 RAD21O60216 631 aa10.18□□□□□ -0.78
RAB3IP-217ENST00000552610 WASHC4Q2M389 1173 aa10.18□□□□□ -0.78
RAB3IP-217ENST00000552610 MCCD1P59942 119 aaPredicted RBP10.17□□□□□ -0.78
RAB3IP-217ENST00000552610 DHX9Q08211 1270 aaKnown RBP10.17□□□□□ -0.78
RAB3IP-217ENST00000552610 SEPT12Q8IYM1 358 aa10.17□□□□□ -0.78
RAB3IP-217ENST00000552610 ZNF784Q8NCA9 323 aaPredicted RBP10.17□□□□□ -0.78
RAB3IP-217ENST00000552610 EIF4G2P78344 907 aaKnown RBP eCLIP10.16□□□□□ -0.78
RAB3IP-217ENST00000552610 CBLBQ13191 982 aa10.16□□□□□ -0.78
RAB3IP-217ENST00000552610 MEIOBQ8N635 442 aa10.16□□□□□ -0.78
RAB3IP-217ENST00000552610 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
RAB3IP-217ENST00000552610 MRPL14Q6P1L8 145 aaKnown RBP10.15□□□□□ -0.78
RAB3IP-217ENST00000552610 ZNF592Q92610 1267 aa10.15□□□□□ -0.78
RAB3IP-217ENST00000552610 CEP126Q9P2H0 1117 aa10.15□□□□□ -0.78
RAB3IP-217ENST00000552610 POM121CA8CG34 1229 aa10.14□□□□□ -0.79
RAB3IP-217ENST00000552610 ZNF787Q6DD87 383 aa10.14□□□□□ -0.79
RAB3IP-217ENST00000552610 LILRA1O75019 489 aa10.13□□□□□ -0.79
RAB3IP-217ENST00000552610 Q6ZVU0 165 aa10.13□□□□□ -0.79
RAB3IP-217ENST00000552610 FNBP4Q8N3X1 1017 aaPredicted RBP10.12□□□□□ -0.79
RAB3IP-217ENST00000552610 ZFP42Q96MM3 310 aa10.12□□□□□ -0.79
RAB3IP-217ENST00000552610 CCDC85AQ96PX6 553 aaPredicted RBP10.12□□□□□ -0.79
RAB3IP-217ENST00000552610 PURBQ96QR8 312 aaKnown RBP10.12□□□□□ -0.79
RAB3IP-217ENST00000552610 RNF20Q5VTR2 975 aa10.11□□□□□ -0.79
RAB3IP-217ENST00000552610 PROSER2Q86WR7 435 aaPredicted RBP10.11□□□□□ -0.79
RAB3IP-217ENST00000552610 LINC00528Q8N1L1 170 aa10.11□□□□□ -0.79
RAB3IP-217ENST00000552610 PHTF2Q8N3S3 785 aa10.11□□□□□ -0.79
RAB3IP-217ENST00000552610 TRIM47Q96LD4 638 aa10.11□□□□□ -0.79
RAB3IP-217ENST00000552610 CYLDQ9NQC7 956 aa10.11□□□□□ -0.79
RAB3IP-217ENST00000552610 SNRPBP14678 240 aaKnown RBP10.1□□□□□ -0.79
RAB3IP-217ENST00000552610 ADD1P35611 737 aaKnown RBP10.1□□□□□ -0.79
RAB3IP-217ENST00000552610 C6orf118Q5T5N4 469 aa10.1□□□□□ -0.79
RAB3IP-217ENST00000552610 WWC1Q8IX03 1113 aa10.1□□□□□ -0.79
RAB3IP-217ENST00000552610 ADAMTS19Q8TE59 1207 aa10.1□□□□□ -0.79
RAB3IP-217ENST00000552610 ALG2Q9H553 416 aa10.1□□□□□ -0.79
RAB3IP-217ENST00000552610 PCDHB11Q9Y5F2 797 aa10.1□□□□□ -0.79
RAB3IP-217ENST00000552610 SOX11P35716 441 aa10.09□□□□□ -0.79
RAB3IP-217ENST00000552610 SCTRP47872 440 aa10.09□□□□□ -0.79
RAB3IP-217ENST00000552610 SEMA3FQ13275 785 aa10.09□□□□□ -0.79
RAB3IP-217ENST00000552610 TSGA10IPQ3SY00 556 aa10.09□□□□□ -0.79
RAB3IP-217ENST00000552610 ERICH6Q7L0X2 663 aa10.09□□□□□ -0.79
RAB3IP-217ENST00000552610 AGBL1Q96MI9 1066 aa10.09□□□□□ -0.79
RAB3IP-217ENST00000552610 SENP2Q9HC62 589 aa10.09□□□□□ -0.79
RAB3IP-217ENST00000552610 GTF3C3Q9Y5Q9 886 aa10.09□□□□□ -0.79
RAB3IP-217ENST00000552610 A6NJR5 290 aa10.08□□□□□ -0.8
RAB3IP-217ENST00000552610 C11orf95C9JLR9 678 aaPredicted RBP10.08□□□□□ -0.8
RAB3IP-217ENST00000552610 ERVK-9P63128 1117 aa10.08□□□□□ -0.8
RAB3IP-217ENST00000552610 CDCA7Q9BWT1 371 aaPredicted RBP10.08□□□□□ -0.8
RAB3IP-217ENST00000552610 PIK3CDO00329 1044 aa10.07□□□□□ -0.8
RAB3IP-217ENST00000552610 ADH1AP07327 375 aa10.07□□□□□ -0.8
RAB3IP-217ENST00000552610 SCARF1Q14162 830 aa10.07□□□□□ -0.8
RAB3IP-217ENST00000552610 CCDC125Q86Z20 511 aa10.07□□□□□ -0.8
RAB3IP-217ENST00000552610 KDF1Q8NAX2 398 aaPredicted RBP10.07□□□□□ -0.8
RAB3IP-217ENST00000552610 KIFC2Q96AC6 838 aa10.07□□□□□ -0.8
RAB3IP-217ENST00000552610 TSEN34Q9BSV6 310 aaKnown RBP10.07□□□□□ -0.8
RAB3IP-217ENST00000552610 BMP2P12643 396 aa10.06□□□□□ -0.8
RAB3IP-217ENST00000552610 SLFNL1Q499Z3 407 aa10.06□□□□□ -0.8
RAB3IP-217ENST00000552610 RNF135Q8IUD6 432 aa10.06□□□□□ -0.8
RAB3IP-217ENST00000552610 CHIC2Q9UKJ5 165 aa10.06□□□□□ -0.8
RAB3IP-217ENST00000552610 UPP2O95045 317 aa10.05□□□□□ -0.8
RAB3IP-217ENST00000552610 RELBQ01201 579 aa10.05□□□□□ -0.8
RAB3IP-217ENST00000552610 CC2D2BQ6DHV5 1058 aa10.05□□□□□ -0.8
RAB3IP-217ENST00000552610 SOBPA7XYQ1 873 aa10.03□□□□□ -0.8
RAB3IP-217ENST00000552610 SPINT1O43278 529 aa10.03□□□□□ -0.8
RAB3IP-217ENST00000552610 OSBPL3Q9H4L5 887 aa10.03□□□□□ -0.8
RAB3IP-217ENST00000552610 ZNF395Q9H8N7 513 aaPredicted RBP10.03□□□□□ -0.8
RAB3IP-217ENST00000552610 DOLKQ9UPQ8 538 aa10.03□□□□□ -0.8
RAB3IP-217ENST00000552610 SOS2Q07890 1332 aaPredicted RBP10.02□□□□□ -0.81
RAB3IP-217ENST00000552610 TRAK2O60296 914 aa10.01□□□□□ -0.81
RAB3IP-217ENST00000552610 PTGIRP43119 386 aa10.01□□□□□ -0.81
RAB3IP-217ENST00000552610 HDGFL1Q5TGJ6 251 aa10.01□□□□□ -0.81
RAB3IP-217ENST00000552610 PLPP7Q8NBV4 271 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms