RNA–Protein interactions for RNA: ENST00000552608.6

LINC00661-206, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 1,130 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-206ENST00000552608 APAF1O14727 1248 aa14.42□□□□□ -0.1
LINC00661-206ENST00000552608 TOM1O60784 492 aa14.42□□□□□ -0.1
LINC00661-206ENST00000552608 HOXC9P31274 260 aa14.42□□□□□ -0.1
LINC00661-206ENST00000552608 DDX17Q92841 729 aaKnown RBP14.42□□□□□ -0.1
LINC00661-206ENST00000552608 ABCC6O95255 1503 aa14.41□□□□□ -0.1
LINC00661-206ENST00000552608 EIF4A2Q14240 407 aaKnown RBP14.41□□□□□ -0.1
LINC00661-206ENST00000552608 IP6K1Q92551 441 aa14.41□□□□□ -0.1
LINC00661-206ENST00000552608 SALL2Q9Y467 1007 aaPredicted RBP14.41□□□□□ -0.1
LINC00661-206ENST00000552608 ZBTB7CA1YPR0 619 aa14.4□□□□□ -0.1
LINC00661-206ENST00000552608 HSP90AB2PQ58FF8 381 aa14.4□□□□□ -0.1
LINC00661-206ENST00000552608 TCP11L2Q8N4U5 519 aa14.4□□□□□ -0.1
LINC00661-206ENST00000552608 ABCA3Q99758 1704 aa14.4□□□□□ -0.1
LINC00661-206ENST00000552608 PHLPP1O60346 1717 aa14.39□□□□□ -0.11
LINC00661-206ENST00000552608 FAM208AQ9UK61 1670 aaKnown RBP14.39□□□□□ -0.11
LINC00661-206ENST00000552608 PRKAR2BP31323 418 aa14.38□□□□□ -0.11
LINC00661-206ENST00000552608 HAP1P54257 671 aaPredicted RBP14.38□□□□□ -0.11
LINC00661-206ENST00000552608 ARHGEF25Q86VW2 580 aa14.38□□□□□ -0.11
LINC00661-206ENST00000552608 LRRC59Q96AG4 307 aaKnown RBP14.38□□□□□ -0.11
LINC00661-206ENST00000552608 PLEKHF1Q96S99 279 aa14.38□□□□□ -0.11
LINC00661-206ENST00000552608 RSPH6AQ9H0K4 717 aa14.38□□□□□ -0.11
LINC00661-206ENST00000552608 RGPD5Q99666 1765 aa14.37□□□□□ -0.11
LINC00661-206ENST00000552608 HMOX1P09601 288 aa14.37□□□□□ -0.11
LINC00661-206ENST00000552608 CCDC27Q2M243 656 aa14.37□□□□□ -0.11
LINC00661-206ENST00000552608 SENP3-EIF4A1A0A087X0R7 540 aa14.36□□□□□ -0.11
LINC00661-206ENST00000552608 PLEKHG5O94827 1062 aa14.36□□□□□ -0.11
LINC00661-206ENST00000552608 GOLGA2Q08379 1002 aa14.36□□□□□ -0.11
LINC00661-206ENST00000552608 COL22A1Q8NFW1 1626 aaPredicted RBP14.36□□□□□ -0.11
LINC00661-206ENST00000552608 DLG5Q8TDM6 1919 aa14.35□□□□□ -0.11
LINC00661-206ENST00000552608 SULT6B1Q6IMI4 303 aa14.35□□□□□ -0.11
LINC00661-206ENST00000552608 IGSF1Q8N6C5 1336 aa14.35□□□□□ -0.11
LINC00661-206ENST00000552608 CPDO75976 1380 aa14.34□□□□□ -0.11
LINC00661-206ENST00000552608 COL18A1P39060 1754 aa14.34□□□□□ -0.11
LINC00661-206ENST00000552608 ZC3H6P61129 1189 aaKnown RBP14.34□□□□□ -0.11
LINC00661-206ENST00000552608 LMOD3Q0VAK6 560 aa14.34□□□□□ -0.11
LINC00661-206ENST00000552608 NEUROD2Q15784 382 aa14.34□□□□□ -0.11
LINC00661-206ENST00000552608 LTV1Q96GA3 475 aaPredicted RBP14.34□□□□□ -0.11
LINC00661-206ENST00000552608 ZNF521Q96K83 1311 aa14.34□□□□□ -0.11
LINC00661-206ENST00000552608 KDRP35968 1356 aa14.34□□□□□ -0.11
LINC00661-206ENST00000552608 RGPD2P0DJD1 1756 aa14.33□□□□□ -0.12
LINC00661-206ENST00000552608 UBAP1LF5GYI3 381 aa14.33□□□□□ -0.12
LINC00661-206ENST00000552608 TMPOP42166 694 aaKnown RBP14.33□□□□□ -0.12
LINC00661-206ENST00000552608 WDR63Q8IWG1 891 aa14.33□□□□□ -0.12
LINC00661-206ENST00000552608 WWC1Q8IX03 1113 aa14.33□□□□□ -0.12
LINC00661-206ENST00000552608 EYA1Q99502 592 aa14.33□□□□□ -0.12
LINC00661-206ENST00000552608 COL16A1Q07092 1604 aaPredicted RBP14.33□□□□□ -0.12
LINC00661-206ENST00000552608 CAMTA1Q9Y6Y1 1673 aa14.33□□□□□ -0.12
LINC00661-206ENST00000552608 E9PSI1 815 aa14.32□□□□□ -0.12
LINC00661-206ENST00000552608 RIPK4P57078 832 aa14.32□□□□□ -0.12
LINC00661-206ENST00000552608 NFE2L2Q16236 605 aa14.32□□□□□ -0.12
LINC00661-206ENST00000552608 CABLES1Q8TDN4 633 aa14.32□□□□□ -0.12
LINC00661-206ENST00000552608 RRP7AQ9Y3A4 280 aaKnown RBP14.32□□□□□ -0.12
LINC00661-206ENST00000552608 CALD1Q05682 793 aaKnown RBP14.31□□□□□ -0.12
LINC00661-206ENST00000552608 ANKRD24Q8TF21 1146 aa14.31□□□□□ -0.12
LINC00661-206ENST00000552608 PHF23Q9BUL5 403 aaPredicted RBP14.31□□□□□ -0.12
LINC00661-206ENST00000552608 PIP4K2BP78356 416 aa14.3□□□□□ -0.12
LINC00661-206ENST00000552608 CERKQ8TCT0 537 aa14.3□□□□□ -0.12
LINC00661-206ENST00000552608 KIAA0232Q92628 1395 aa14.3□□□□□ -0.12
LINC00661-206ENST00000552608 NEFLP07196 543 aa14.29□□□□□ -0.12
LINC00661-206ENST00000552608 SLFN5Q08AF3 891 aa14.29□□□□□ -0.12
LINC00661-206ENST00000552608 AEBP1Q8IUX7 1158 aa14.29□□□□□ -0.12
LINC00661-206ENST00000552608 GAS2L2Q8NHY3 880 aa14.29□□□□□ -0.12
LINC00661-206ENST00000552608 PRDM11Q9NQV5 511 aa14.29□□□□□ -0.12
LINC00661-206ENST00000552608 COL14A1Q05707 1796 aaKnown RBP14.29□□□□□ -0.12
LINC00661-206ENST00000552608 CSB-PGBD3P0DP91 1061 aa14.28□□□□□ -0.12
LINC00661-206ENST00000552608 ERBB3P21860 1342 aa14.28□□□□□ -0.12
LINC00661-206ENST00000552608 IL16Q14005 1332 aa14.28□□□□□ -0.12
LINC00661-206ENST00000552608 LMO7Q8WWI1 1683 aa14.28□□□□□ -0.12
LINC00661-206ENST00000552608 CDCA7LQ96GN5 454 aa14.28□□□□□ -0.12
LINC00661-206ENST00000552608 PHACTR3Q96KR7 559 aa14.28□□□□□ -0.12
LINC00661-206ENST00000552608 MYH16Q9H6N6 1097 aa14.28□□□□□ -0.12
LINC00661-206ENST00000552608 NCAPD2Q15021 1401 aa14.27□□□□□ -0.12
LINC00661-206ENST00000552608 PLEKHG2Q9H7P9 1386 aa14.26□□□□□ -0.13
LINC00661-206ENST00000552608 NBPF6Q5VWK0 638 aa14.26□□□□□ -0.13
LINC00661-206ENST00000552608 NBPF4Q96M43 638 aa14.26□□□□□ -0.13
LINC00661-206ENST00000552608 CHRNA2Q15822 529 aa14.25□□□□□ -0.13
LINC00661-206ENST00000552608 DUSP27Q5VZP5 1158 aa14.25□□□□□ -0.13
LINC00661-206ENST00000552608 RTF1Q92541 710 aaKnown RBP14.25□□□□□ -0.13
LINC00661-206ENST00000552608 TRIM35Q9UPQ4 493 aa14.25□□□□□ -0.13
LINC00661-206ENST00000552608 AXIN2Q9Y2T1 843 aa14.25□□□□□ -0.13
LINC00661-206ENST00000552608 HTATSF1O43719 755 aaKnown RBP14.24□□□□□ -0.13
LINC00661-206ENST00000552608 AMOTQ4VCS5 1084 aa14.24□□□□□ -0.13
LINC00661-206ENST00000552608 TRMT2AQ8IZ69 625 aaKnown RBP14.24□□□□□ -0.13
LINC00661-206ENST00000552608 USHBP1Q8N6Y0 703 aa14.24□□□□□ -0.13
LINC00661-206ENST00000552608 NLRP2Q9NX02 1062 aa14.24□□□□□ -0.13
LINC00661-206ENST00000552608 PARP4Q9UKK3 1724 aaKnown RBP14.24□□□□□ -0.13
LINC00661-206ENST00000552608 GNAI1P63096 354 aa14.23□□□□□ -0.13
LINC00661-206ENST00000552608 PLEKHO1Q53GL0 409 aaPredicted RBP14.23□□□□□ -0.13
LINC00661-206ENST00000552608 SUPT16HQ9Y5B9 1047 aaKnown RBP14.23□□□□□ -0.13
LINC00661-206ENST00000552608 GTF3C3Q9Y5Q9 886 aa14.23□□□□□ -0.13
LINC00661-206ENST00000552608 WDR17Q8IZU2 1322 aa14.22□□□□□ -0.13
LINC00661-206ENST00000552608 MTHFSDQ2M296 383 aaKnown RBP14.22□□□□□ -0.13
LINC00661-206ENST00000552608 RAPGEF4Q8WZA2 1011 aa14.22□□□□□ -0.13
LINC00661-206ENST00000552608 RCAN3Q9UKA8 241 aa14.22□□□□□ -0.13
LINC00661-206ENST00000552608 COL5A2P05997 1499 aaPredicted RBP14.22□□□□□ -0.13
LINC00661-206ENST00000552608 VIRMAQ69YN4 1812 aaKnown RBP14.22□□□□□ -0.13
LINC00661-206ENST00000552608 PLCH1Q4KWH8 1693 aa14.21□□□□□ -0.13
LINC00661-206ENST00000552608 TATP17735 454 aaPredicted RBP14.21□□□□□ -0.13
LINC00661-206ENST00000552608 EVA1CP58658 441 aa14.21□□□□□ -0.13
LINC00661-206ENST00000552608 IFT57Q9NWB7 429 aa14.21□□□□□ -0.13
LINC00661-206ENST00000552608 MAP3K5Q99683 1374 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms