RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 PARD3Q8TEW0 1356 aa13.26□□□□□ -0.29
PRIM1-208ENST00000552590 NUP188Q5SRE5 1749 aa13.26□□□□□ -0.29
PRIM1-208ENST00000552590 MYOM3Q5VTT5 1437 aa13.26□□□□□ -0.29
PRIM1-208ENST00000552590 ADGRL2O95490 1459 aa13.26□□□□□ -0.29
PRIM1-208ENST00000552590 ADGRB2O60241 1585 aa13.25□□□□□ -0.29
PRIM1-208ENST00000552590 RREB1Q92766 1687 aa13.25□□□□□ -0.29
PRIM1-208ENST00000552590 NWD2Q9ULI1 1742 aa13.24□□□□□ -0.29
PRIM1-208ENST00000552590 HAP1P54257 671 aaPredicted RBP13.24□□□□□ -0.29
PRIM1-208ENST00000552590 CABLES1Q8TDN4 633 aa13.24□□□□□ -0.29
PRIM1-208ENST00000552590 PLA2G2EQ9NZK7 142 aa13.23□□□□□ -0.29
PRIM1-208ENST00000552590 FBXO3Q9UK99 471 aa13.23□□□□□ -0.29
PRIM1-208ENST00000552590 NRKQ7Z2Y5 1582 aa13.23□□□□□ -0.29
PRIM1-208ENST00000552590 ABCC5O15440 1437 aa13.23□□□□□ -0.29
PRIM1-208ENST00000552590 SPATA31A3Q5VYP0 1347 aa13.22□□□□□ -0.29
PRIM1-208ENST00000552590 ROBO2Q9HCK4 1378 aa13.2□□□□□ -0.3
PRIM1-208ENST00000552590 FAM83GA6ND36 823 aa13.2□□□□□ -0.3
PRIM1-208ENST00000552590 SYT17Q9BSW7 474 aa13.2□□□□□ -0.3
PRIM1-208ENST00000552590 CHIC2Q9UKJ5 165 aa13.2□□□□□ -0.3
PRIM1-208ENST00000552590 CROCC2H7BZ55 1655 aa13.2□□□□□ -0.3
PRIM1-208ENST00000552590 MYOM1P52179 1685 aa13.19□□□□□ -0.3
PRIM1-208ENST00000552590 FAM196AQ6ZSG2 479 aa13.19□□□□□ -0.3
PRIM1-208ENST00000552590 FHDC1Q9C0D6 1143 aaPredicted RBP13.19□□□□□ -0.3
PRIM1-208ENST00000552590 LRPPRCP42704 1394 aaKnown RBP13.19□□□□□ -0.3
PRIM1-208ENST00000552590 SLC34A2O95436 690 aa13.18□□□□□ -0.3
PRIM1-208ENST00000552590 KLHL34Q8N239 644 aa13.18□□□□□ -0.3
PRIM1-208ENST00000552590 PDGFDQ9GZP0 370 aaPredicted RBP13.18□□□□□ -0.3
PRIM1-208ENST00000552590 NUTM2FA1L443 756 aa13.17□□□□□ -0.3
PRIM1-208ENST00000552590 ZBTB7AO95365 584 aa13.17□□□□□ -0.3
PRIM1-208ENST00000552590 LSM11P83369 360 aaKnown RBP eCLIP13.17□□□□□ -0.3
PRIM1-208ENST00000552590 TMEM92Q6UXU6 159 aa13.16□□□□□ -0.3
PRIM1-208ENST00000552590 BTG4Q9NY30 223 aa13.16□□□□□ -0.3
PRIM1-208ENST00000552590 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
PRIM1-208ENST00000552590 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.3
PRIM1-208ENST00000552590 HSPA6P17066 643 aa13.15□□□□□ -0.3
PRIM1-208ENST00000552590 ANKRD30AQ9BXX3 1397 aa13.15□□□□□ -0.31
PRIM1-208ENST00000552590 SPATA31A5Q5VU36 1347 aa13.14□□□□□ -0.31
PRIM1-208ENST00000552590 SPATA31A7Q8IWB4 1347 aa13.14□□□□□ -0.31
PRIM1-208ENST00000552590 ZNF326Q5BKZ1 582 aaKnown RBP13.14□□□□□ -0.31
PRIM1-208ENST00000552590 KRT28Q7Z3Y7 464 aa13.14□□□□□ -0.31
PRIM1-208ENST00000552590 CASZ1Q86V15 1759 aa13.14□□□□□ -0.31
PRIM1-208ENST00000552590 DAPK1P53355 1430 aa13.13□□□□□ -0.31
PRIM1-208ENST00000552590 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
PRIM1-208ENST00000552590 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
PRIM1-208ENST00000552590 PCNTO95613 3336 aa13.12□□□□□ -0.31
PRIM1-208ENST00000552590 IQGAP3Q86VI3 1631 aa13.12□□□□□ -0.31
PRIM1-208ENST00000552590 E9PCH4 1651 aa13.11□□□□□ -0.31
PRIM1-208ENST00000552590 ARSIQ5FYB1 569 aa13.11□□□□□ -0.31
PRIM1-208ENST00000552590 LMOD2Q6P5Q4 547 aa13.11□□□□□ -0.31
PRIM1-208ENST00000552590 ABCA3Q99758 1704 aa13.11□□□□□ -0.31
PRIM1-208ENST00000552590 ZNF316A6NFI3 1004 aaPredicted RBP13.1□□□□□ -0.31
PRIM1-208ENST00000552590 GPR162Q16538 588 aa13.1□□□□□ -0.31
PRIM1-208ENST00000552590 COL13A1Q5TAT6 717 aaPredicted RBP13.1□□□□□ -0.31
PRIM1-208ENST00000552590 MICALL2Q8IY33 904 aa13.1□□□□□ -0.31
PRIM1-208ENST00000552590 HCSTQ9UBK5 93 aa13.1□□□□□ -0.31
PRIM1-208ENST00000552590 CCDC144AA2RUR9 1427 aa13.1□□□□□ -0.31
PRIM1-208ENST00000552590 TNS3Q68CZ2 1445 aa13.1□□□□□ -0.31
PRIM1-208ENST00000552590 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
PRIM1-208ENST00000552590 DLC1Q96QB1 1528 aa13.1□□□□□ -0.31
PRIM1-208ENST00000552590 HFM1A2PYH4 1435 aa13.09□□□□□ -0.31
PRIM1-208ENST00000552590 PRELPP51888 382 aa13.08□□□□□ -0.32
PRIM1-208ENST00000552590 KANK4Q5T7N3 995 aaPredicted RBP13.06□□□□□ -0.32
PRIM1-208ENST00000552590 NEXMIFQ5QGS0 1516 aa13.06□□□□□ -0.32
PRIM1-208ENST00000552590 NAIPQ13075 1403 aa13.06□□□□□ -0.32
PRIM1-208ENST00000552590 PDE3BQ13370 1112 aa13.05□□□□□ -0.32
PRIM1-208ENST00000552590 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
PRIM1-208ENST00000552590 PSME1Q06323 249 aa13.04□□□□□ -0.32
PRIM1-208ENST00000552590 EFCAB3Q8N7B9 438 aa13.04□□□□□ -0.32
PRIM1-208ENST00000552590 SPATA31A1Q5TZJ5 1347 aa13.04□□□□□ -0.32
PRIM1-208ENST00000552590 PRAG1Q86YV5 1406 aa13.04□□□□□ -0.32
PRIM1-208ENST00000552590 COL14A1Q05707 1796 aaKnown RBP13.04□□□□□ -0.32
PRIM1-208ENST00000552590 KIF1AQ12756 1690 aa13.03□□□□□ -0.32
PRIM1-208ENST00000552590 TNS4Q8IZW8 715 aa13.03□□□□□ -0.32
PRIM1-208ENST00000552590 ARXQ96QS3 562 aa13.03□□□□□ -0.32
PRIM1-208ENST00000552590 BCL11BQ9C0K0 894 aaPredicted RBP13.03□□□□□ -0.32
PRIM1-208ENST00000552590 ARHGEF10O15013 1369 aa13.03□□□□□ -0.32
PRIM1-208ENST00000552590 PBX2P40425 430 aa13.02□□□□□ -0.33
PRIM1-208ENST00000552590 KHSRPQ92945 711 aaKnown RBP eCLIP13.02□□□□□ -0.33
PRIM1-208ENST00000552590 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.33
PRIM1-208ENST00000552590 USP35Q9P2H5 1018 aa13.01□□□□□ -0.33
PRIM1-208ENST00000552590 ATP10DQ9P241 1426 aa13.01□□□□□ -0.33
PRIM1-208ENST00000552590 SBNO1A3KN83 1393 aa13□□□□□ -0.33
PRIM1-208ENST00000552590 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
PRIM1-208ENST00000552590 MTFR1LQ9H019 292 aa13□□□□□ -0.33
PRIM1-208ENST00000552590 GPBP1L1Q9HC44 474 aaPredicted RBP13□□□□□ -0.33
PRIM1-208ENST00000552590 MAP3K5Q99683 1374 aa12.99□□□□□ -0.33
PRIM1-208ENST00000552590 VASPP50552 380 aaPredicted RBP12.99□□□□□ -0.33
PRIM1-208ENST00000552590 DNAJC5GQ8N7S2 189 aa12.99□□□□□ -0.33
PRIM1-208ENST00000552590 PHF8Q9UPP1 1060 aa12.99□□□□□ -0.33
PRIM1-208ENST00000552590 TECPR2O15040 1411 aa12.99□□□□□ -0.33
PRIM1-208ENST00000552590 PLSCR1O15162 318 aa12.98□□□□□ -0.33
PRIM1-208ENST00000552590 STRN4Q9NRL3 753 aa12.98□□□□□ -0.33
PRIM1-208ENST00000552590 RGPD8O14715 1765 aaPredicted RBP12.98□□□□□ -0.33
PRIM1-208ENST00000552590 FMN2Q9NZ56 1722 aa12.97□□□□□ -0.33
PRIM1-208ENST00000552590 ZNF526Q8TF50 670 aaPredicted RBP12.97□□□□□ -0.33
PRIM1-208ENST00000552590 PRDM11Q9NQV5 511 aa12.97□□□□□ -0.33
PRIM1-208ENST00000552590 RGPD3A6NKT7 1758 aaPredicted RBP12.96□□□□□ -0.34
PRIM1-208ENST00000552590 RGPD4Q7Z3J3 1758 aa12.96□□□□□ -0.34
PRIM1-208ENST00000552590 PTF1AQ7RTS3 328 aa12.96□□□□□ -0.34
PRIM1-208ENST00000552590 STK32BQ9NY57 414 aa12.96□□□□□ -0.34
PRIM1-208ENST00000552590 APLP1P51693 650 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms