RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 PER1O15534 1290 aaPredicted RBP18.03■□□□□ 0.48
CDK4-212ENST00000552388 ZC3H6P61129 1189 aaKnown RBP18.03■□□□□ 0.48
CDK4-212ENST00000552388 GGNBP2Q9H3C7 697 aa18.03■□□□□ 0.48
CDK4-212ENST00000552388 PRDM11Q9NQV5 511 aa18.03■□□□□ 0.48
CDK4-212ENST00000552388 NSD2O96028 1365 aa18.03■□□□□ 0.48
CDK4-212ENST00000552388 ABCC6O95255 1503 aa18.03■□□□□ 0.48
CDK4-212ENST00000552388 KNSTRNQ9Y448 316 aa18.02■□□□□ 0.48
CDK4-212ENST00000552388 CAMTA1Q9Y6Y1 1673 aa18■□□□□ 0.47
CDK4-212ENST00000552388 ARHGEF25Q86VW2 580 aa18■□□□□ 0.47
CDK4-212ENST00000552388 THSD7AQ9UPZ6 1657 aa17.99■□□□□ 0.47
CDK4-212ENST00000552388 SOX12O15370 315 aa17.99■□□□□ 0.47
CDK4-212ENST00000552388 CHRNA2Q15822 529 aa17.99■□□□□ 0.47
CDK4-212ENST00000552388 AATKQ6ZMQ8 1374 aa17.99■□□□□ 0.47
CDK4-212ENST00000552388 AMER1Q5JTC6 1135 aaPredicted RBP17.98■□□□□ 0.47
CDK4-212ENST00000552388 BTG4Q9NY30 223 aa17.98■□□□□ 0.47
CDK4-212ENST00000552388 SEPT12Q8IYM1 358 aa17.97■□□□□ 0.47
CDK4-212ENST00000552388 NPC1L1Q9UHC9 1359 aa17.96■□□□□ 0.47
CDK4-212ENST00000552388 DISP2A7MBM2 1401 aa17.96■□□□□ 0.47
CDK4-212ENST00000552388 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
CDK4-212ENST00000552388 PEAK1Q9H792 1746 aa17.95■□□□□ 0.46
CDK4-212ENST00000552388 TNS1Q9HBL0 1735 aaKnown RBP17.95■□□□□ 0.46
CDK4-212ENST00000552388 ZBTB7CA1YPR0 619 aa17.94■□□□□ 0.46
CDK4-212ENST00000552388 RGPD1P0DJD0 1748 aa17.94■□□□□ 0.46
CDK4-212ENST00000552388 FAM208AQ9UK61 1670 aaKnown RBP17.93■□□□□ 0.46
CDK4-212ENST00000552388 ZNF316A6NFI3 1004 aaPredicted RBP17.93■□□□□ 0.46
CDK4-212ENST00000552388 FBLN1P23142 703 aa17.93■□□□□ 0.46
CDK4-212ENST00000552388 DEFB132Q7Z7B7 95 aa17.93■□□□□ 0.46
CDK4-212ENST00000552388 AXIN2Q9Y2T1 843 aa17.93■□□□□ 0.46
CDK4-212ENST00000552388 MAP3K19Q56UN5 1328 aa17.93■□□□□ 0.46
CDK4-212ENST00000552388 KIF24Q5T7B8 1368 aa17.92■□□□□ 0.46
CDK4-212ENST00000552388 RTL1A6NKG5 1358 aa17.91■□□□□ 0.46
CDK4-212ENST00000552388 RRS1Q15050 365 aaKnown RBP17.91■□□□□ 0.46
CDK4-212ENST00000552388 KRT27Q7Z3Y8 459 aa17.91■□□□□ 0.46
CDK4-212ENST00000552388 RGPD2P0DJD1 1756 aa17.9■□□□□ 0.46
CDK4-212ENST00000552388 MORC1Q86VD1 984 aa17.9■□□□□ 0.46
CDK4-212ENST00000552388 IP6K1Q92551 441 aa17.9■□□□□ 0.46
CDK4-212ENST00000552388 WNK3Q9BYP7 1800 aa17.9■□□□□ 0.46
CDK4-212ENST00000552388 EVA1CP58658 441 aa17.89■□□□□ 0.45
CDK4-212ENST00000552388 DDX10Q13206 875 aaKnown RBP17.89■□□□□ 0.45
CDK4-212ENST00000552388 CC2D1BQ5T0F9 858 aaKnown RBP17.89■□□□□ 0.45
CDK4-212ENST00000552388 STRN4Q9NRL3 753 aa17.89■□□□□ 0.45
CDK4-212ENST00000552388 HOXC9P31274 260 aa17.88■□□□□ 0.45
CDK4-212ENST00000552388 AMPHP49418 695 aa17.88■□□□□ 0.45
CDK4-212ENST00000552388 FLT4P35916 1363 aa17.88■□□□□ 0.45
CDK4-212ENST00000552388 CRB1P82279 1406 aa17.88■□□□□ 0.45
CDK4-212ENST00000552388 SMG6Q86US8 1419 aaKnown RBP17.88■□□□□ 0.45
CDK4-212ENST00000552388 ERBB3P21860 1342 aa17.87■□□□□ 0.45
CDK4-212ENST00000552388 SPATA31A5Q5VU36 1347 aa17.87■□□□□ 0.45
CDK4-212ENST00000552388 SPATA31A7Q8IWB4 1347 aa17.87■□□□□ 0.45
CDK4-212ENST00000552388 WDR17Q8IZU2 1322 aa17.87■□□□□ 0.45
CDK4-212ENST00000552388 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
CDK4-212ENST00000552388 LARP1Q6PKG0 1096 aaKnown RBP17.86■□□□□ 0.45
CDK4-212ENST00000552388 POLKQ9UBT6 870 aa17.86■□□□□ 0.45
CDK4-212ENST00000552388 EMILIN1Q9Y6C2 1016 aa17.86■□□□□ 0.45
CDK4-212ENST00000552388 INSRP06213 1382 aa17.85■□□□□ 0.45
CDK4-212ENST00000552388 SPATA31A1Q5TZJ5 1347 aa17.85■□□□□ 0.45
CDK4-212ENST00000552388 CCDC9Q9Y3X0 531 aaKnown RBP17.85■□□□□ 0.45
CDK4-212ENST00000552388 SF3B2Q13435 895 aaKnown RBP17.84■□□□□ 0.45
CDK4-212ENST00000552388 ANKRD24Q8TF21 1146 aa17.83■□□□□ 0.44
CDK4-212ENST00000552388 RREB1Q92766 1687 aa17.83■□□□□ 0.44
CDK4-212ENST00000552388 PARP4Q9UKK3 1724 aaKnown RBP17.82■□□□□ 0.44
CDK4-212ENST00000552388 BAG6P46379 1132 aa17.82■□□□□ 0.44
CDK4-212ENST00000552388 FAM98CQ17RN3 349 aaKnown RBP17.82■□□□□ 0.44
CDK4-212ENST00000552388 HSP90AB2PQ58FF8 381 aa17.82■□□□□ 0.44
CDK4-212ENST00000552388 TOM1L2Q6ZVM7 507 aa17.82■□□□□ 0.44
CDK4-212ENST00000552388 CSB-PGBD3P0DP91 1061 aa17.81■□□□□ 0.44
CDK4-212ENST00000552388 CARD10Q9BWT7 1032 aa17.81■□□□□ 0.44
CDK4-212ENST00000552388 THRAP3Q9Y2W1 955 aaKnown RBP17.81■□□□□ 0.44
CDK4-212ENST00000552388 PARD3Q8TEW0 1356 aa17.8■□□□□ 0.44
CDK4-212ENST00000552388 PPM1GO15355 546 aaPredicted RBP17.8■□□□□ 0.44
CDK4-212ENST00000552388 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
CDK4-212ENST00000552388 BARGINQ6ZT62 677 aa17.8■□□□□ 0.44
CDK4-212ENST00000552388 TCP11L2Q8N4U5 519 aa17.8■□□□□ 0.44
CDK4-212ENST00000552388 LTV1Q96GA3 475 aaPredicted RBP17.79■□□□□ 0.44
CDK4-212ENST00000552388 USP35Q9P2H5 1018 aa17.79■□□□□ 0.44
CDK4-212ENST00000552388 LRRC37A3O60309 1634 aa17.77■□□□□ 0.44
CDK4-212ENST00000552388 MTHFSP49914 203 aa17.77■□□□□ 0.44
CDK4-212ENST00000552388 NLRP2Q9NX02 1062 aa17.77■□□□□ 0.44
CDK4-212ENST00000552388 NUP188Q5SRE5 1749 aa17.76■□□□□ 0.43
CDK4-212ENST00000552388 NCAPD2Q15021 1401 aa17.75■□□□□ 0.43
CDK4-212ENST00000552388 PPP2R1AP30153 589 aa17.75■□□□□ 0.43
CDK4-212ENST00000552388 EN1Q05925 392 aaPredicted RBP17.74■□□□□ 0.43
CDK4-212ENST00000552388 EIF4A2Q14240 407 aaKnown RBP17.74■□□□□ 0.43
CDK4-212ENST00000552388 RALBP1Q15311 655 aa17.74■□□□□ 0.43
CDK4-212ENST00000552388 NBPF6Q5VWK0 638 aa17.74■□□□□ 0.43
CDK4-212ENST00000552388 NBPF4Q96M43 638 aa17.74■□□□□ 0.43
CDK4-212ENST00000552388 COL3A1P02461 1466 aaPredicted RBP17.74■□□□□ 0.43
CDK4-212ENST00000552388 PSDA5PKW4 1024 aaPredicted RBP17.73■□□□□ 0.43
CDK4-212ENST00000552388 CDCA7Q9BWT1 371 aaPredicted RBP17.73■□□□□ 0.43
CDK4-212ENST00000552388 RGPD3A6NKT7 1758 aaPredicted RBP17.73■□□□□ 0.43
CDK4-212ENST00000552388 RGPD4Q7Z3J3 1758 aa17.73■□□□□ 0.43
CDK4-212ENST00000552388 CAMKK2Q96RR4 588 aa17.72■□□□□ 0.43
CDK4-212ENST00000552388 SHANK3Q9BYB0 1731 aa17.72■□□□□ 0.43
CDK4-212ENST00000552388 FAM182BQ5T319 152 aa17.71■□□□□ 0.43
CDK4-212ENST00000552388 A0A0G2JS52 829 aa17.7■□□□□ 0.42
CDK4-212ENST00000552388 IL2RBP14784 551 aa17.7■□□□□ 0.42
CDK4-212ENST00000552388 MYT1Q01538 1121 aa17.7■□□□□ 0.42
CDK4-212ENST00000552388 EYA1Q99502 592 aa17.7■□□□□ 0.42
CDK4-212ENST00000552388 PKD1L3Q7Z443 1732 aa17.69■□□□□ 0.42
CDK4-212ENST00000552388 MEGF6O75095 1541 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms