RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 CASZ1Q86V15 1759 aa23.6■■□□□ 1.37
RAB5C-209ENST00000552162 PLSCR1O15162 318 aa23.59■■□□□ 1.37
RAB5C-209ENST00000552162 CPSF1Q10570 1443 aaKnown RBP23.59■■□□□ 1.37
RAB5C-209ENST00000552162 TRPM1Q7Z4N2 1603 aa23.58■■□□□ 1.36
RAB5C-209ENST00000552162 WDR17Q8IZU2 1322 aa23.58■■□□□ 1.36
RAB5C-209ENST00000552162 ANO8Q9HCE9 1232 aaPredicted RBP23.57■■□□□ 1.36
RAB5C-209ENST00000552162 RGPD5Q99666 1765 aa23.57■■□□□ 1.36
RAB5C-209ENST00000552162 PTF1AQ7RTS3 328 aa23.56■■□□□ 1.36
RAB5C-209ENST00000552162 BCL11BQ9C0K0 894 aaPredicted RBP23.56■■□□□ 1.36
RAB5C-209ENST00000552162 AXIN2Q9Y2T1 843 aa23.56■■□□□ 1.36
RAB5C-209ENST00000552162 EVC2Q86UK5 1308 aa23.55■■□□□ 1.36
RAB5C-209ENST00000552162 BCL9O00512 1426 aa23.53■■□□□ 1.36
RAB5C-209ENST00000552162 MARCH10Q8NA82 808 aaPredicted RBP23.53■■□□□ 1.36
RAB5C-209ENST00000552162 CDCA7Q9BWT1 371 aaPredicted RBP23.53■■□□□ 1.36
RAB5C-209ENST00000552162 DCAF8L1A6NGE4 600 aa23.52■■□□□ 1.36
RAB5C-209ENST00000552162 ARHGEF25Q86VW2 580 aa23.51■■□□□ 1.35
RAB5C-209ENST00000552162 KCNH5Q8NCM2 988 aa23.51■■□□□ 1.35
RAB5C-209ENST00000552162 SOX12O15370 315 aa23.5■■□□□ 1.35
RAB5C-209ENST00000552162 TTC21BQ7Z4L5 1316 aa23.5■■□□□ 1.35
RAB5C-209ENST00000552162 MYOM1P52179 1685 aa23.5■■□□□ 1.35
RAB5C-209ENST00000552162 NFAT5O94916 1531 aa23.49■■□□□ 1.35
RAB5C-209ENST00000552162 CSB-PGBD3P0DP91 1061 aa23.49■■□□□ 1.35
RAB5C-209ENST00000552162 PROM2Q8N271 834 aa23.49■■□□□ 1.35
RAB5C-209ENST00000552162 PDGFDQ9GZP0 370 aaPredicted RBP23.49■■□□□ 1.35
RAB5C-209ENST00000552162 L3MBTL2Q969R5 705 aa23.48■■□□□ 1.35
RAB5C-209ENST00000552162 ZNF692Q9BU19 519 aaPredicted RBP23.48■■□□□ 1.35
RAB5C-209ENST00000552162 CARD10Q9BWT7 1032 aa23.48■■□□□ 1.35
RAB5C-209ENST00000552162 TTC21AQ8NDW8 1320 aa23.47■■□□□ 1.35
RAB5C-209ENST00000552162 ABCC6O95255 1503 aa23.47■■□□□ 1.35
RAB5C-209ENST00000552162 MON2Q7Z3U7 1717 aa23.45■■□□□ 1.34
RAB5C-209ENST00000552162 TNS2Q63HR2 1409 aa23.45■■□□□ 1.34
RAB5C-209ENST00000552162 CCDC7Q96M83 1385 aa23.45■■□□□ 1.34
RAB5C-209ENST00000552162 ZBTB7AO95365 584 aa23.45■■□□□ 1.34
RAB5C-209ENST00000552162 ROCK2O75116 1388 aaKnown RBP23.44■■□□□ 1.34
RAB5C-209ENST00000552162 TXNRD1Q16881 649 aa23.44■■□□□ 1.34
RAB5C-209ENST00000552162 NHSQ6T4R5 1651 aa23.44■■□□□ 1.34
RAB5C-209ENST00000552162 EXOC5O00471 708 aa23.43■■□□□ 1.34
RAB5C-209ENST00000552162 STK32BQ9NY57 414 aa23.43■■□□□ 1.34
RAB5C-209ENST00000552162 KTN1Q86UP2 1357 aaKnown RBP23.42■■□□□ 1.34
RAB5C-209ENST00000552162 PTGER2P43116 358 aa23.42■■□□□ 1.34
RAB5C-209ENST00000552162 USP54Q70EL1 1684 aa23.41■■□□□ 1.34
RAB5C-209ENST00000552162 SLC15A2Q16348 729 aa23.4■■□□□ 1.34
RAB5C-209ENST00000552162 ATF5Q9Y2D1 282 aaPredicted RBP23.39■■□□□ 1.33
RAB5C-209ENST00000552162 LTN1O94822 1766 aa23.39■■□□□ 1.33
RAB5C-209ENST00000552162 PAPPAQ13219 1627 aa23.37■■□□□ 1.33
RAB5C-209ENST00000552162 SIN3AQ96ST3 1273 aa23.36■■□□□ 1.33
RAB5C-209ENST00000552162 ERBB3P21860 1342 aa23.35■■□□□ 1.33
RAB5C-209ENST00000552162 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.35■■□□□ 1.33
RAB5C-209ENST00000552162 USP31Q70CQ4 1352 aa23.35■■□□□ 1.33
RAB5C-209ENST00000552162 BTAF1O14981 1849 aa23.35■■□□□ 1.33
RAB5C-209ENST00000552162 ACSBG1Q96GR2 724 aa23.34■■□□□ 1.33
RAB5C-209ENST00000552162 FHDC1Q9C0D6 1143 aaPredicted RBP23.34■■□□□ 1.33
RAB5C-209ENST00000552162 MTFR1LQ9H019 292 aa23.34■■□□□ 1.33
RAB5C-209ENST00000552162 UTRNP46939 3433 aa23.33■■□□□ 1.33
RAB5C-209ENST00000552162 CD163L1Q9NR16 1453 aa23.33■■□□□ 1.33
RAB5C-209ENST00000552162 SBNO2Q9Y2G9 1366 aa23.33■■□□□ 1.33
RAB5C-209ENST00000552162 NLRP2Q9NX02 1062 aa23.33■■□□□ 1.33
RAB5C-209ENST00000552162 SYT17Q9BSW7 474 aa23.32■■□□□ 1.32
RAB5C-209ENST00000552162 IL2RBP14784 551 aa23.31■■□□□ 1.32
RAB5C-209ENST00000552162 NEUROD1Q13562 356 aa23.31■■□□□ 1.32
RAB5C-209ENST00000552162 NME9Q86XW9 330 aa23.31■■□□□ 1.32
RAB5C-209ENST00000552162 SGIP1Q9BQI5 828 aa23.31■■□□□ 1.32
RAB5C-209ENST00000552162 CHD4Q14839 1912 aa23.29■■□□□ 1.32
RAB5C-209ENST00000552162 ZNF784Q8NCA9 323 aaPredicted RBP23.28■■□□□ 1.32
RAB5C-209ENST00000552162 KAT6BQ8WYB5 2073 aa23.28■■□□□ 1.32
RAB5C-209ENST00000552162 ANKRD24Q8TF21 1146 aa23.27■■□□□ 1.32
RAB5C-209ENST00000552162 EDC4Q6P2E9 1401 aaKnown RBP23.25■■□□□ 1.31
RAB5C-209ENST00000552162 ZNF827Q17R98 1081 aa23.25■■□□□ 1.31
RAB5C-209ENST00000552162 TMC1Q8TDI8 760 aa23.25■■□□□ 1.31
RAB5C-209ENST00000552162 ARXQ96QS3 562 aa23.25■■□□□ 1.31
RAB5C-209ENST00000552162 FAM208AQ9UK61 1670 aaKnown RBP23.25■■□□□ 1.31
RAB5C-209ENST00000552162 HDGFL2Q7Z4V5 671 aaPredicted RBP23.24■■□□□ 1.31
RAB5C-209ENST00000552162 QSER1Q2KHR3 1735 aa23.23■■□□□ 1.31
RAB5C-209ENST00000552162 MAP3K5Q99683 1374 aa23.23■■□□□ 1.31
RAB5C-209ENST00000552162 LRRC4BQ9NT99 713 aa23.22■■□□□ 1.31
RAB5C-209ENST00000552162 CARD11Q9BXL7 1154 aa23.21■■□□□ 1.31
RAB5C-209ENST00000552162 SLC12A5Q9H2X9 1139 aa23.21■■□□□ 1.31
RAB5C-209ENST00000552162 A0A1W2PP64 1363 aa23.21■■□□□ 1.31
RAB5C-209ENST00000552162 TUBGCP6Q96RT7 1819 aa23.18■■□□□ 1.3
RAB5C-209ENST00000552162 TERF2IPQ9NYB0 399 aa23.18■■□□□ 1.3
RAB5C-209ENST00000552162 COL24A1Q17RW2 1714 aa23.17■■□□□ 1.3
RAB5C-209ENST00000552162 DOT1LQ8TEK3 1739 aa23.17■■□□□ 1.3
RAB5C-209ENST00000552162 AKT1S1Q96B36 256 aa23.17■■□□□ 1.3
RAB5C-209ENST00000552162 SLC27A3Q5K4L6 730 aa23.16■■□□□ 1.3
RAB5C-209ENST00000552162 DDX54Q8TDD1 881 aaKnown RBP23.16■■□□□ 1.3
RAB5C-209ENST00000552162 IP6K1Q92551 441 aa23.16■■□□□ 1.3
RAB5C-209ENST00000552162 LTV1Q96GA3 475 aaPredicted RBP23.15■■□□□ 1.3
RAB5C-209ENST00000552162 SHANK3Q9BYB0 1731 aa23.14■■□□□ 1.3
RAB5C-209ENST00000552162 SLC16A10Q8TF71 515 aa23.14■■□□□ 1.29
RAB5C-209ENST00000552162 LY75O60449 1722 aa23.13■■□□□ 1.29
RAB5C-209ENST00000552162 PNPLA7Q6ZV29 1317 aa23.13■■□□□ 1.29
RAB5C-209ENST00000552162 KLHL34Q8N239 644 aa23.13■■□□□ 1.29
RAB5C-209ENST00000552162 RGPD2P0DJD1 1756 aa23.12■■□□□ 1.29
RAB5C-209ENST00000552162 POLD1P28340 1107 aa23.12■■□□□ 1.29
RAB5C-209ENST00000552162 GPR162Q16538 588 aa23.12■■□□□ 1.29
RAB5C-209ENST00000552162 SYTL4Q96C24 671 aaPredicted RBP23.12■■□□□ 1.29
RAB5C-209ENST00000552162 ANKRD36BQ8N2N9 1353 aa23.12■■□□□ 1.29
RAB5C-209ENST00000552162 PUS7Q96PZ0 661 aaKnown RBP23.11■■□□□ 1.29
RAB5C-209ENST00000552162 GOLGB1Q14789 3259 aaKnown RBP23.11■■□□□ 1.29
RAB5C-209ENST00000552162 KCNQ4P56696 695 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms