RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 AKAP12Q02952 1782 aa20.44■□□□□ 0.86
CHMP1A-210ENST00000551981 YY1P25490 414 aa20.43■□□□□ 0.86
CHMP1A-210ENST00000551981 CDCA7Q9BWT1 371 aaPredicted RBP20.43■□□□□ 0.86
CHMP1A-210ENST00000551981 WDR17Q8IZU2 1322 aa20.43■□□□□ 0.86
CHMP1A-210ENST00000551981 NINLQ9Y2I6 1382 aa20.43■□□□□ 0.86
CHMP1A-210ENST00000551981 BCL11BQ9C0K0 894 aaPredicted RBP20.42■□□□□ 0.86
CHMP1A-210ENST00000551981 TRPM1Q7Z4N2 1603 aa20.42■□□□□ 0.86
CHMP1A-210ENST00000551981 KCNH5Q8NCM2 988 aa20.41■□□□□ 0.86
CHMP1A-210ENST00000551981 CPSF1Q10570 1443 aaKnown RBP20.41■□□□□ 0.86
CHMP1A-210ENST00000551981 ZNF692Q9BU19 519 aaPredicted RBP20.4■□□□□ 0.86
CHMP1A-210ENST00000551981 RGPD5Q99666 1765 aa20.39■□□□□ 0.85
CHMP1A-210ENST00000551981 BCL9O00512 1426 aa20.38■□□□□ 0.85
CHMP1A-210ENST00000551981 AXIN2Q9Y2T1 843 aa20.38■□□□□ 0.85
CHMP1A-210ENST00000551981 CASZ1Q86V15 1759 aa20.38■□□□□ 0.85
CHMP1A-210ENST00000551981 TTC21BQ7Z4L5 1316 aa20.37■□□□□ 0.85
CHMP1A-210ENST00000551981 CSB-PGBD3P0DP91 1061 aa20.37■□□□□ 0.85
CHMP1A-210ENST00000551981 ARHGEF25Q86VW2 580 aa20.37■□□□□ 0.85
CHMP1A-210ENST00000551981 MARCH10Q8NA82 808 aaPredicted RBP20.37■□□□□ 0.85
CHMP1A-210ENST00000551981 TTC21AQ8NDW8 1320 aa20.36■□□□□ 0.85
CHMP1A-210ENST00000551981 L3MBTL2Q969R5 705 aa20.36■□□□□ 0.85
CHMP1A-210ENST00000551981 CARD10Q9BWT7 1032 aa20.36■□□□□ 0.85
CHMP1A-210ENST00000551981 ANO8Q9HCE9 1232 aaPredicted RBP20.36■□□□□ 0.85
CHMP1A-210ENST00000551981 SOX12O15370 315 aa20.35■□□□□ 0.85
CHMP1A-210ENST00000551981 PTF1AQ7RTS3 328 aa20.34■□□□□ 0.85
CHMP1A-210ENST00000551981 ROCK2O75116 1388 aaKnown RBP20.34■□□□□ 0.85
CHMP1A-210ENST00000551981 ABCC6O95255 1503 aa20.33■□□□□ 0.85
CHMP1A-210ENST00000551981 EXOC5O00471 708 aa20.33■□□□□ 0.85
CHMP1A-210ENST00000551981 CCDC7Q96M83 1385 aa20.33■□□□□ 0.84
CHMP1A-210ENST00000551981 NFAT5O94916 1531 aa20.32■□□□□ 0.84
CHMP1A-210ENST00000551981 STK32BQ9NY57 414 aa20.32■□□□□ 0.84
CHMP1A-210ENST00000551981 KTN1Q86UP2 1357 aaKnown RBP20.32■□□□□ 0.84
CHMP1A-210ENST00000551981 PROM2Q8N271 834 aa20.31■□□□□ 0.84
CHMP1A-210ENST00000551981 ZBTB7AO95365 584 aa20.3■□□□□ 0.84
CHMP1A-210ENST00000551981 MON2Q7Z3U7 1717 aa20.3■□□□□ 0.84
CHMP1A-210ENST00000551981 TNS2Q63HR2 1409 aa20.29■□□□□ 0.84
CHMP1A-210ENST00000551981 TXNRD1Q16881 649 aa20.29■□□□□ 0.84
CHMP1A-210ENST00000551981 MYOM1P52179 1685 aa20.29■□□□□ 0.84
CHMP1A-210ENST00000551981 NHSQ6T4R5 1651 aa20.27■□□□□ 0.84
CHMP1A-210ENST00000551981 SLC15A2Q16348 729 aa20.27■□□□□ 0.84
CHMP1A-210ENST00000551981 PDGFDQ9GZP0 370 aaPredicted RBP20.27■□□□□ 0.84
CHMP1A-210ENST00000551981 USP54Q70EL1 1684 aa20.26■□□□□ 0.83
CHMP1A-210ENST00000551981 PTGER2P43116 358 aa20.25■□□□□ 0.83
CHMP1A-210ENST00000551981 ATF5Q9Y2D1 282 aaPredicted RBP20.25■□□□□ 0.83
CHMP1A-210ENST00000551981 LTN1O94822 1766 aa20.24■□□□□ 0.83
CHMP1A-210ENST00000551981 USP31Q70CQ4 1352 aa20.23■□□□□ 0.83
CHMP1A-210ENST00000551981 UTRNP46939 3433 aa20.23■□□□□ 0.83
CHMP1A-210ENST00000551981 NEUROD1Q13562 356 aa20.23■□□□□ 0.83
CHMP1A-210ENST00000551981 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.23■□□□□ 0.83
CHMP1A-210ENST00000551981 SIN3AQ96ST3 1273 aa20.23■□□□□ 0.83
CHMP1A-210ENST00000551981 MTFR1LQ9H019 292 aa20.23■□□□□ 0.83
CHMP1A-210ENST00000551981 NLRP2Q9NX02 1062 aa20.23■□□□□ 0.83
CHMP1A-210ENST00000551981 SBNO2Q9Y2G9 1366 aa20.22■□□□□ 0.83
CHMP1A-210ENST00000551981 ERBB3P21860 1342 aa20.22■□□□□ 0.83
CHMP1A-210ENST00000551981 IL2RBP14784 551 aa20.2■□□□□ 0.82
CHMP1A-210ENST00000551981 ACSBG1Q96GR2 724 aa20.2■□□□□ 0.82
CHMP1A-210ENST00000551981 BTAF1O14981 1849 aa20.2■□□□□ 0.82
CHMP1A-210ENST00000551981 KAT6BQ8WYB5 2073 aa20.19■□□□□ 0.82
CHMP1A-210ENST00000551981 HDGFL2Q7Z4V5 671 aaPredicted RBP20.19■□□□□ 0.82
CHMP1A-210ENST00000551981 FHDC1Q9C0D6 1143 aaPredicted RBP20.19■□□□□ 0.82
CHMP1A-210ENST00000551981 NME9Q86XW9 330 aa20.18■□□□□ 0.82
CHMP1A-210ENST00000551981 TMC1Q8TDI8 760 aa20.18■□□□□ 0.82
CHMP1A-210ENST00000551981 SYT17Q9BSW7 474 aa20.18■□□□□ 0.82
CHMP1A-210ENST00000551981 PAPPAQ13219 1627 aa20.17■□□□□ 0.82
CHMP1A-210ENST00000551981 ANKRD24Q8TF21 1146 aa20.17■□□□□ 0.82
CHMP1A-210ENST00000551981 CD163L1Q9NR16 1453 aa20.17■□□□□ 0.82
CHMP1A-210ENST00000551981 EDC4Q6P2E9 1401 aaKnown RBP20.16■□□□□ 0.82
CHMP1A-210ENST00000551981 CHD4Q14839 1912 aa20.15■□□□□ 0.82
CHMP1A-210ENST00000551981 SGIP1Q9BQI5 828 aa20.15■□□□□ 0.82
CHMP1A-210ENST00000551981 CARD11Q9BXL7 1154 aa20.15■□□□□ 0.82
CHMP1A-210ENST00000551981 FAM208AQ9UK61 1670 aaKnown RBP20.14■□□□□ 0.81
CHMP1A-210ENST00000551981 ARXQ96QS3 562 aa20.14■□□□□ 0.81
CHMP1A-210ENST00000551981 TERF2IPQ9NYB0 399 aa20.14■□□□□ 0.81
CHMP1A-210ENST00000551981 ZNF784Q8NCA9 323 aaPredicted RBP20.13■□□□□ 0.81
CHMP1A-210ENST00000551981 MAP3K5Q99683 1374 aa20.11■□□□□ 0.81
CHMP1A-210ENST00000551981 SLC12A5Q9H2X9 1139 aa20.11■□□□□ 0.81
CHMP1A-210ENST00000551981 QSER1Q2KHR3 1735 aa20.1■□□□□ 0.81
CHMP1A-210ENST00000551981 A0A1W2PP64 1363 aa20.09■□□□□ 0.81
CHMP1A-210ENST00000551981 ZNF827Q17R98 1081 aa20.09■□□□□ 0.81
CHMP1A-210ENST00000551981 SLC27A3Q5K4L6 730 aa20.09■□□□□ 0.81
CHMP1A-210ENST00000551981 DDX54Q8TDD1 881 aaKnown RBP20.08■□□□□ 0.81
CHMP1A-210ENST00000551981 IP6K1Q92551 441 aa20.08■□□□□ 0.81
CHMP1A-210ENST00000551981 PUS7Q96PZ0 661 aaKnown RBP20.08■□□□□ 0.81
CHMP1A-210ENST00000551981 LRRC4BQ9NT99 713 aa20.08■□□□□ 0.81
CHMP1A-210ENST00000551981 SLC16A10Q8TF71 515 aa20.07■□□□□ 0.8
CHMP1A-210ENST00000551981 POLD1P28340 1107 aa20.06■□□□□ 0.8
CHMP1A-210ENST00000551981 AKT1S1Q96B36 256 aa20.06■□□□□ 0.8
CHMP1A-210ENST00000551981 LTV1Q96GA3 475 aaPredicted RBP20.06■□□□□ 0.8
CHMP1A-210ENST00000551981 GPR162Q16538 588 aa20.04■□□□□ 0.8
CHMP1A-210ENST00000551981 SYTL4Q96C24 671 aaPredicted RBP20.04■□□□□ 0.8
CHMP1A-210ENST00000551981 DOT1LQ8TEK3 1739 aa20.04■□□□□ 0.8
CHMP1A-210ENST00000551981 COG3Q96JB2 828 aa20.03■□□□□ 0.8
CHMP1A-210ENST00000551981 TFCP2L1Q9NZI6 479 aa20.03■□□□□ 0.8
CHMP1A-210ENST00000551981 TONSLQ96HA7 1378 aa20.03■□□□□ 0.8
CHMP1A-210ENST00000551981 COL24A1Q17RW2 1714 aa20.02■□□□□ 0.8
CHMP1A-210ENST00000551981 KLHL34Q8N239 644 aa20.02■□□□□ 0.8
CHMP1A-210ENST00000551981 ANKRD36BQ8N2N9 1353 aa20.02■□□□□ 0.8
CHMP1A-210ENST00000551981 TUBGCP6Q96RT7 1819 aa20.02■□□□□ 0.79
CHMP1A-210ENST00000551981 AMPHP49418 695 aa20.01■□□□□ 0.79
CHMP1A-210ENST00000551981 LY75O60449 1722 aa20.01■□□□□ 0.79
CHMP1A-210ENST00000551981 PNPLA7Q6ZV29 1317 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms