RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 L3MBTL2Q969R5 705 aa31.25■■■□□ 2.59
SMARCD1-212ENST00000551966 ANO8Q9HCE9 1232 aaPredicted RBP31.25■■■□□ 2.59
SMARCD1-212ENST00000551966 WDR17Q8IZU2 1322 aa31.24■■■□□ 2.59
SMARCD1-212ENST00000551966 ARHGEF25Q86VW2 580 aa31.24■■■□□ 2.59
SMARCD1-212ENST00000551966 PIK3C2AO00443 1686 aa31.24■■■□□ 2.59
SMARCD1-212ENST00000551966 PDGFDQ9GZP0 370 aaPredicted RBP31.22■■■□□ 2.59
SMARCD1-212ENST00000551966 TTC21BQ7Z4L5 1316 aa31.22■■■□□ 2.59
SMARCD1-212ENST00000551966 EVC2Q86UK5 1308 aa31.22■■■□□ 2.59
SMARCD1-212ENST00000551966 ZNF692Q9BU19 519 aaPredicted RBP31.2■■■□□ 2.59
SMARCD1-212ENST00000551966 RGPD3A6NKT7 1758 aaPredicted RBP31.2■■■□□ 2.58
SMARCD1-212ENST00000551966 RGPD4Q7Z3J3 1758 aa31.2■■■□□ 2.58
SMARCD1-212ENST00000551966 CPSF1Q10570 1443 aaKnown RBP31.19■■■□□ 2.58
SMARCD1-212ENST00000551966 CDCA7Q9BWT1 371 aaPredicted RBP31.18■■■□□ 2.58
SMARCD1-212ENST00000551966 BCL9O00512 1426 aa31.17■■■□□ 2.58
SMARCD1-212ENST00000551966 KCNH5Q8NCM2 988 aa31.17■■■□□ 2.58
SMARCD1-212ENST00000551966 CARD10Q9BWT7 1032 aa31.17■■■□□ 2.58
SMARCD1-212ENST00000551966 NINLQ9Y2I6 1382 aa31.17■■■□□ 2.58
SMARCD1-212ENST00000551966 SOX12O15370 315 aa31.16■■■□□ 2.58
SMARCD1-212ENST00000551966 RGPD5Q99666 1765 aa31.15■■■□□ 2.58
SMARCD1-212ENST00000551966 CASZ1Q86V15 1759 aa31.14■■■□□ 2.58
SMARCD1-212ENST00000551966 WNK3Q9BYP7 1800 aa31.14■■■□□ 2.58
SMARCD1-212ENST00000551966 SIN3AQ96ST3 1273 aa31.13■■■□□ 2.57
SMARCD1-212ENST00000551966 CSB-PGBD3P0DP91 1061 aa31.12■■■□□ 2.57
SMARCD1-212ENST00000551966 EXOC5O00471 708 aa31.11■■■□□ 2.57
SMARCD1-212ENST00000551966 TTC21AQ8NDW8 1320 aa31.11■■■□□ 2.57
SMARCD1-212ENST00000551966 TRPM1Q7Z4N2 1603 aa31.1■■■□□ 2.57
SMARCD1-212ENST00000551966 ZBTB7AO95365 584 aa31.1■■■□□ 2.57
SMARCD1-212ENST00000551966 TXNRD1Q16881 649 aa31.1■■■□□ 2.57
SMARCD1-212ENST00000551966 PTGER2P43116 358 aa31.09■■■□□ 2.57
SMARCD1-212ENST00000551966 AKAP12Q02952 1782 aa31.09■■■□□ 2.57
SMARCD1-212ENST00000551966 DCAF8L1A6NGE4 600 aa31.08■■■□□ 2.57
SMARCD1-212ENST00000551966 ATF5Q9Y2D1 282 aaPredicted RBP31.07■■■□□ 2.56
SMARCD1-212ENST00000551966 NFAT5O94916 1531 aa31.07■■■□□ 2.56
SMARCD1-212ENST00000551966 SLC15A2Q16348 729 aa31.05■■■□□ 2.56
SMARCD1-212ENST00000551966 ROCK2O75116 1388 aaKnown RBP31.05■■■□□ 2.56
SMARCD1-212ENST00000551966 KTN1Q86UP2 1357 aaKnown RBP31.05■■■□□ 2.56
SMARCD1-212ENST00000551966 STK32BQ9NY57 414 aa31.03■■■□□ 2.56
SMARCD1-212ENST00000551966 CCDC7Q96M83 1385 aa31.03■■■□□ 2.56
SMARCD1-212ENST00000551966 NEUROD1Q13562 356 aa31.01■■■□□ 2.55
SMARCD1-212ENST00000551966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31■■■□□ 2.55
SMARCD1-212ENST00000551966 USP31Q70CQ4 1352 aa30.98■■■□□ 2.55
SMARCD1-212ENST00000551966 ACSBG1Q96GR2 724 aa30.98■■■□□ 2.55
SMARCD1-212ENST00000551966 MYOM1P52179 1685 aa30.97■■■□□ 2.55
SMARCD1-212ENST00000551966 TNS2Q63HR2 1409 aa30.97■■■□□ 2.55
SMARCD1-212ENST00000551966 NME9Q86XW9 330 aa30.96■■■□□ 2.55
SMARCD1-212ENST00000551966 SGIP1Q9BQI5 828 aa30.96■■■□□ 2.55
SMARCD1-212ENST00000551966 ABCC6O95255 1503 aa30.95■■■□□ 2.55
SMARCD1-212ENST00000551966 SYT17Q9BSW7 474 aa30.95■■■□□ 2.55
SMARCD1-212ENST00000551966 NLRP2Q9NX02 1062 aa30.95■■■□□ 2.55
SMARCD1-212ENST00000551966 ERBB3P21860 1342 aa30.95■■■□□ 2.54
SMARCD1-212ENST00000551966 FHDC1Q9C0D6 1143 aaPredicted RBP30.94■■■□□ 2.54
SMARCD1-212ENST00000551966 MTFR1LQ9H019 292 aa30.94■■■□□ 2.54
SMARCD1-212ENST00000551966 MON2Q7Z3U7 1717 aa30.93■■■□□ 2.54
SMARCD1-212ENST00000551966 CD163L1Q9NR16 1453 aa30.93■■■□□ 2.54
SMARCD1-212ENST00000551966 SBNO2Q9Y2G9 1366 aa30.92■■■□□ 2.54
SMARCD1-212ENST00000551966 IL2RBP14784 551 aa30.91■■■□□ 2.54
SMARCD1-212ENST00000551966 NHSQ6T4R5 1651 aa30.9■■■□□ 2.54
SMARCD1-212ENST00000551966 SLC12A5Q9H2X9 1139 aa30.89■■■□□ 2.54
SMARCD1-212ENST00000551966 ANKRD24Q8TF21 1146 aa30.88■■■□□ 2.53
SMARCD1-212ENST00000551966 USP54Q70EL1 1684 aa30.87■■■□□ 2.53
SMARCD1-212ENST00000551966 TMC1Q8TDI8 760 aa30.87■■■□□ 2.53
SMARCD1-212ENST00000551966 LRRC4BQ9NT99 713 aa30.86■■■□□ 2.53
SMARCD1-212ENST00000551966 ZNF784Q8NCA9 323 aaPredicted RBP30.85■■■□□ 2.53
SMARCD1-212ENST00000551966 ZNF827Q17R98 1081 aa30.84■■■□□ 2.53
SMARCD1-212ENST00000551966 PAPPAQ13219 1627 aa30.84■■■□□ 2.53
SMARCD1-212ENST00000551966 LTN1O94822 1766 aa30.83■■■□□ 2.53
SMARCD1-212ENST00000551966 HDGFL2Q7Z4V5 671 aaPredicted RBP30.82■■■□□ 2.52
SMARCD1-212ENST00000551966 ARXQ96QS3 562 aa30.82■■■□□ 2.52
SMARCD1-212ENST00000551966 CARD11Q9BXL7 1154 aa30.82■■■□□ 2.52
SMARCD1-212ENST00000551966 BTAF1O14981 1849 aa30.81■■■□□ 2.52
SMARCD1-212ENST00000551966 EDC4Q6P2E9 1401 aaKnown RBP30.78■■■□□ 2.52
SMARCD1-212ENST00000551966 IP6K1Q92551 441 aa30.77■■■□□ 2.52
SMARCD1-212ENST00000551966 AKT1S1Q96B36 256 aa30.77■■■□□ 2.52
SMARCD1-212ENST00000551966 DDX54Q8TDD1 881 aaKnown RBP30.76■■■□□ 2.51
SMARCD1-212ENST00000551966 TERF2IPQ9NYB0 399 aa30.75■■■□□ 2.51
SMARCD1-212ENST00000551966 A0A1W2PP64 1363 aa30.75■■■□□ 2.51
SMARCD1-212ENST00000551966 KAT6BQ8WYB5 2073 aa30.74■■■□□ 2.51
SMARCD1-212ENST00000551966 UTRNP46939 3433 aa30.73■■■□□ 2.51
SMARCD1-212ENST00000551966 LTV1Q96GA3 475 aaPredicted RBP30.73■■■□□ 2.51
SMARCD1-212ENST00000551966 MAP3K5Q99683 1374 aa30.73■■■□□ 2.51
SMARCD1-212ENST00000551966 PUS7Q96PZ0 661 aaKnown RBP30.72■■■□□ 2.51
SMARCD1-212ENST00000551966 FBLN1P23142 703 aa30.7■■■□□ 2.51
SMARCD1-212ENST00000551966 KCNQ4P56696 695 aa30.7■■■□□ 2.51
SMARCD1-212ENST00000551966 SLC27A3Q5K4L6 730 aa30.7■■■□□ 2.51
SMARCD1-212ENST00000551966 SLC16A10Q8TF71 515 aa30.68■■■□□ 2.5
SMARCD1-212ENST00000551966 PNPLA7Q6ZV29 1317 aa30.68■■■□□ 2.5
SMARCD1-212ENST00000551966 CHD4Q14839 1912 aa30.67■■■□□ 2.5
SMARCD1-212ENST00000551966 PRIM1P49642 420 aaKnown RBP30.67■■■□□ 2.5
SMARCD1-212ENST00000551966 MAP3K19Q56UN5 1328 aa30.65■■■□□ 2.5
SMARCD1-212ENST00000551966 HOXC9P31274 260 aa30.64■■■□□ 2.5
SMARCD1-212ENST00000551966 SYTL4Q96C24 671 aaPredicted RBP30.64■■■□□ 2.5
SMARCD1-212ENST00000551966 TESK2Q96S53 571 aa30.64■■■□□ 2.5
SMARCD1-212ENST00000551966 GPR162Q16538 588 aa30.63■■■□□ 2.49
SMARCD1-212ENST00000551966 TFCP2L1Q9NZI6 479 aa30.62■■■□□ 2.49
SMARCD1-212ENST00000551966 ANKRD36BQ8N2N9 1353 aa30.62■■■□□ 2.49
SMARCD1-212ENST00000551966 COG3Q96JB2 828 aa30.61■■■□□ 2.49
SMARCD1-212ENST00000551966 NSD2O96028 1365 aa30.61■■■□□ 2.49
SMARCD1-212ENST00000551966 QSER1Q2KHR3 1735 aa30.61■■■□□ 2.49
SMARCD1-212ENST00000551966 COL24A1Q17RW2 1714 aa30.6■■■□□ 2.49
SMARCD1-212ENST00000551966 ZCRB1Q8TBF4 217 aaKnown RBP30.6■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms