RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 ZBTB7CA1YPR0 619 aa22.35■■□□□ 1.17
CACNB3-220ENST00000551716 MARCH10Q8NA82 808 aaPredicted RBP22.35■■□□□ 1.17
CACNB3-220ENST00000551716 CASZ1Q86V15 1759 aa22.35■■□□□ 1.17
CACNB3-220ENST00000551716 PEAK1Q9H792 1746 aa22.34■■□□□ 1.17
CACNB3-220ENST00000551716 NLRP6P59044 892 aa22.34■■□□□ 1.17
CACNB3-220ENST00000551716 PTF1AQ7RTS3 328 aa22.34■■□□□ 1.17
CACNB3-220ENST00000551716 SRPK2P78362 688 aaKnown RBP22.32■■□□□ 1.16
CACNB3-220ENST00000551716 ARXQ96QS3 562 aa22.32■■□□□ 1.16
CACNB3-220ENST00000551716 WDR17Q8IZU2 1322 aa22.31■■□□□ 1.16
CACNB3-220ENST00000551716 EXOC5O00471 708 aa22.31■■□□□ 1.16
CACNB3-220ENST00000551716 SGIP1Q9BQI5 828 aa22.31■■□□□ 1.16
CACNB3-220ENST00000551716 CARD10Q9BWT7 1032 aa22.29■■□□□ 1.16
CACNB3-220ENST00000551716 PPIP5K1Q6PFW1 1433 aa22.29■■□□□ 1.16
CACNB3-220ENST00000551716 MAP3K5Q99683 1374 aa22.28■■□□□ 1.16
CACNB3-220ENST00000551716 MYOM1P52179 1685 aa22.28■■□□□ 1.16
CACNB3-220ENST00000551716 ARHGEF28Q8N1W1 1705 aaKnown RBP22.28■■□□□ 1.16
CACNB3-220ENST00000551716 SBF2Q86WG5 1849 aa22.27■■□□□ 1.16
CACNB3-220ENST00000551716 GPR162Q16538 588 aa22.27■■□□□ 1.16
CACNB3-220ENST00000551716 TOPAZ1Q8N9V7 1692 aa22.26■■□□□ 1.15
CACNB3-220ENST00000551716 GIGYF1O75420 1035 aaPredicted RBP22.26■■□□□ 1.15
CACNB3-220ENST00000551716 AXIN2Q9Y2T1 843 aa22.26■■□□□ 1.15
CACNB3-220ENST00000551716 LRRC37A3O60309 1634 aa22.26■■□□□ 1.15
CACNB3-220ENST00000551716 CSB-PGBD3P0DP91 1061 aa22.25■■□□□ 1.15
CACNB3-220ENST00000551716 KCNH5Q8NCM2 988 aa22.25■■□□□ 1.15
CACNB3-220ENST00000551716 CABP1Q9NZU7 370 aa22.24■■□□□ 1.15
CACNB3-220ENST00000551716 ARHGEF25Q86VW2 580 aa22.23■■□□□ 1.15
CACNB3-220ENST00000551716 CABP2Q9NPB3 220 aa22.23■■□□□ 1.15
CACNB3-220ENST00000551716 CHD4Q14839 1912 aa22.23■■□□□ 1.15
CACNB3-220ENST00000551716 RAB3GAP2Q9H2M9 1393 aa22.22■■□□□ 1.15
CACNB3-220ENST00000551716 USP6P35125 1406 aa22.22■■□□□ 1.15
CACNB3-220ENST00000551716 SLIT3O75094 1523 aa22.21■■□□□ 1.15
CACNB3-220ENST00000551716 SLC16A10Q8TF71 515 aa22.2■■□□□ 1.14
CACNB3-220ENST00000551716 CENPJQ9HC77 1338 aaPredicted RBP22.2■■□□□ 1.14
CACNB3-220ENST00000551716 CCDC7Q96M83 1385 aa22.2■■□□□ 1.14
CACNB3-220ENST00000551716 ZNF692Q9BU19 519 aaPredicted RBP22.19■■□□□ 1.14
CACNB3-220ENST00000551716 CPSF1Q10570 1443 aaKnown RBP22.17■■□□□ 1.14
CACNB3-220ENST00000551716 POLD1P28340 1107 aa22.17■■□□□ 1.14
CACNB3-220ENST00000551716 NBPF1Q3BBV0 1214 aa22.14■■□□□ 1.13
CACNB3-220ENST00000551716 COL18A1P39060 1754 aa22.13■■□□□ 1.13
CACNB3-220ENST00000551716 AKAP12Q02952 1782 aa22.13■■□□□ 1.13
CACNB3-220ENST00000551716 ACSBG1Q96GR2 724 aa22.13■■□□□ 1.13
CACNB3-220ENST00000551716 GRIN3BO60391 1043 aa22.12■■□□□ 1.13
CACNB3-220ENST00000551716 TNS2Q63HR2 1409 aa22.12■■□□□ 1.13
CACNB3-220ENST00000551716 TTC21BQ7Z4L5 1316 aa22.11■■□□□ 1.13
CACNB3-220ENST00000551716 TTC21AQ8NDW8 1320 aa22.11■■□□□ 1.13
CACNB3-220ENST00000551716 SLC27A3Q5K4L6 730 aa22.11■■□□□ 1.13
CACNB3-220ENST00000551716 PELP1Q8IZL8 1130 aaKnown RBP22.11■■□□□ 1.13
CACNB3-220ENST00000551716 KLHL34Q8N239 644 aa22.11■■□□□ 1.13
CACNB3-220ENST00000551716 EVC2Q86UK5 1308 aa22.1■■□□□ 1.13
CACNB3-220ENST00000551716 SOX12O15370 315 aa22.1■■□□□ 1.13
CACNB3-220ENST00000551716 KIAA1210Q9ULL0 1709 aa22.1■■□□□ 1.13
CACNB3-220ENST00000551716 ZNF827Q17R98 1081 aa22.09■■□□□ 1.13
CACNB3-220ENST00000551716 IL2RBP14784 551 aa22.08■■□□□ 1.13
CACNB3-220ENST00000551716 AKT1S1Q96B36 256 aa22.08■■□□□ 1.13
CACNB3-220ENST00000551716 WNK3Q9BYP7 1800 aa22.08■■□□□ 1.12
CACNB3-220ENST00000551716 LRRC4BQ9NT99 713 aa22.07■■□□□ 1.12
CACNB3-220ENST00000551716 NLRP2Q9NX02 1062 aa22.07■■□□□ 1.12
CACNB3-220ENST00000551716 TFCP2L1Q9NZI6 479 aa22.05■■□□□ 1.12
CACNB3-220ENST00000551716 NHSQ6T4R5 1651 aa22.04■■□□□ 1.12
CACNB3-220ENST00000551716 TRPM1Q7Z4N2 1603 aa22.04■■□□□ 1.12
CACNB3-220ENST00000551716 ABCC6O95255 1503 aa22.04■■□□□ 1.12
CACNB3-220ENST00000551716 PIK3C2AO00443 1686 aa22.04■■□□□ 1.12
CACNB3-220ENST00000551716 CEP350Q5VT06 3117 aa22.03■■□□□ 1.12
CACNB3-220ENST00000551716 PAPPAQ13219 1627 aa22.02■■□□□ 1.12
CACNB3-220ENST00000551716 ERBB3P21860 1342 aa22.02■■□□□ 1.12
CACNB3-220ENST00000551716 PNPLA7Q6ZV29 1317 aa22.01■■□□□ 1.11
CACNB3-220ENST00000551716 NLGN2Q8NFZ4 835 aa22■■□□□ 1.11
CACNB3-220ENST00000551716 QRICH2Q9H0J4 1663 aa22■■□□□ 1.11
CACNB3-220ENST00000551716 KTN1Q86UP2 1357 aaKnown RBP21.98■■□□□ 1.11
CACNB3-220ENST00000551716 NFAT5O94916 1531 aa21.97■■□□□ 1.11
CACNB3-220ENST00000551716 HMGB2P26583 209 aaKnown RBP21.97■■□□□ 1.11
CACNB3-220ENST00000551716 GPBP1L1Q9HC44 474 aaPredicted RBP21.97■■□□□ 1.11
CACNB3-220ENST00000551716 GOLGB1Q14789 3259 aaKnown RBP21.97■■□□□ 1.11
CACNB3-220ENST00000551716 YBX3P16989 372 aaKnown RBP eCLIP21.96■■□□□ 1.11
CACNB3-220ENST00000551716 ANKRD24Q8TF21 1146 aa21.96■■□□□ 1.11
CACNB3-220ENST00000551716 RGPD5Q99666 1765 aa21.96■■□□□ 1.11
CACNB3-220ENST00000551716 HSPA6P17066 643 aa21.95■■□□□ 1.1
CACNB3-220ENST00000551716 DDX54Q8TDD1 881 aaKnown RBP21.95■■□□□ 1.1
CACNB3-220ENST00000551716 USP31Q70CQ4 1352 aa21.95■■□□□ 1.1
CACNB3-220ENST00000551716 SHANK3Q9BYB0 1731 aa21.94■■□□□ 1.1
CACNB3-220ENST00000551716 BTAF1O14981 1849 aa21.94■■□□□ 1.1
CACNB3-220ENST00000551716 ATP10DQ9P241 1426 aa21.92■■□□□ 1.1
CACNB3-220ENST00000551716 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.92■■□□□ 1.1
CACNB3-220ENST00000551716 SYTL4Q96C24 671 aaPredicted RBP21.92■■□□□ 1.1
CACNB3-220ENST00000551716 CD2APQ9Y5K6 639 aa21.92■■□□□ 1.1
CACNB3-220ENST00000551716 MSH5O43196 834 aa21.91■■□□□ 1.1
CACNB3-220ENST00000551716 PRIM1P49642 420 aaKnown RBP21.91■■□□□ 1.1
CACNB3-220ENST00000551716 QSER1Q2KHR3 1735 aa21.9■■□□□ 1.1
CACNB3-220ENST00000551716 KAT6BQ8WYB5 2073 aa21.9■■□□□ 1.1
CACNB3-220ENST00000551716 COL24A1Q17RW2 1714 aa21.89■■□□□ 1.1
CACNB3-220ENST00000551716 ANKRD36BQ8N2N9 1353 aa21.88■■□□□ 1.09
CACNB3-220ENST00000551716 CCNL1Q9UK58 526 aaPredicted RBP21.88■■□□□ 1.09
CACNB3-220ENST00000551716 KCNQ4P56696 695 aa21.87■■□□□ 1.09
CACNB3-220ENST00000551716 COL23A1Q86Y22 540 aaPredicted RBP21.87■■□□□ 1.09
CACNB3-220ENST00000551716 FLAD1Q8NFF5 587 aa21.87■■□□□ 1.09
CACNB3-220ENST00000551716 NME9Q86XW9 330 aa21.86■■□□□ 1.09
CACNB3-220ENST00000551716 IP6K1Q92551 441 aa21.86■■□□□ 1.09
CACNB3-220ENST00000551716 HDGFL2Q7Z4V5 671 aaPredicted RBP21.84■■□□□ 1.09
CACNB3-220ENST00000551716 ZCRB1Q8TBF4 217 aaKnown RBP21.83■■□□□ 1.09
CACNB3-220ENST00000551716 L3MBTL2Q969R5 705 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms