RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 NRAPQ86VF7 1730 aa25.64■■□□□ 1.7
CTDSP2-207ENST00000551594 POTEAQ6S8J7 498 aa25.64■■□□□ 1.7
CTDSP2-207ENST00000551594 QTRT2Q9H974 415 aaKnown RBP25.63■■□□□ 1.69
CTDSP2-207ENST00000551594 MAP2P11137 1827 aaKnown RBP25.63■■□□□ 1.69
CTDSP2-207ENST00000551594 STRN4Q9NRL3 753 aa25.62■■□□□ 1.69
CTDSP2-207ENST00000551594 NPC1L1Q9UHC9 1359 aa25.61■■□□□ 1.69
CTDSP2-207ENST00000551594 EMILIN1Q9Y6C2 1016 aa25.61■■□□□ 1.69
CTDSP2-207ENST00000551594 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.6■■□□□ 1.69
CTDSP2-207ENST00000551594 AMPHP49418 695 aa25.6■■□□□ 1.69
CTDSP2-207ENST00000551594 EVA1CP58658 441 aa25.59■■□□□ 1.69
CTDSP2-207ENST00000551594 PEAK1Q9H792 1746 aa25.58■■□□□ 1.69
CTDSP2-207ENST00000551594 ATRNO75882 1429 aa25.58■■□□□ 1.69
CTDSP2-207ENST00000551594 IP6K1Q92551 441 aa25.58■■□□□ 1.69
CTDSP2-207ENST00000551594 POLKQ9UBT6 870 aa25.58■■□□□ 1.69
CTDSP2-207ENST00000551594 TRPC5Q9UL62 973 aaPredicted RBP25.58■■□□□ 1.69
CTDSP2-207ENST00000551594 PPM1GO15355 546 aaPredicted RBP25.57■■□□□ 1.68
CTDSP2-207ENST00000551594 COL5A2P05997 1499 aaPredicted RBP25.57■■□□□ 1.68
CTDSP2-207ENST00000551594 HOXC9P31274 260 aa25.56■■□□□ 1.68
CTDSP2-207ENST00000551594 VPS72Q15906 364 aa25.56■■□□□ 1.68
CTDSP2-207ENST00000551594 LARP1Q6PKG0 1096 aaKnown RBP25.56■■□□□ 1.68
CTDSP2-207ENST00000551594 CCDC9Q9Y3X0 531 aaKnown RBP25.55■■□□□ 1.68
CTDSP2-207ENST00000551594 ABCC6O95255 1503 aa25.54■■□□□ 1.68
CTDSP2-207ENST00000551594 LTV1Q96GA3 475 aaPredicted RBP25.54■■□□□ 1.68
CTDSP2-207ENST00000551594 HSP90AB2PQ58FF8 381 aa25.53■■□□□ 1.68
CTDSP2-207ENST00000551594 ANKRD24Q8TF21 1146 aa25.52■■□□□ 1.68
CTDSP2-207ENST00000551594 GJD4Q96KN9 370 aaPredicted RBP25.52■■□□□ 1.68
CTDSP2-207ENST00000551594 CSB-PGBD3P0DP91 1061 aa25.51■■□□□ 1.67
CTDSP2-207ENST00000551594 RTL1A6NKG5 1358 aa25.51■■□□□ 1.67
CTDSP2-207ENST00000551594 RXRBP28702 533 aa25.5■■□□□ 1.67
CTDSP2-207ENST00000551594 FLT4P35916 1363 aa25.5■■□□□ 1.67
CTDSP2-207ENST00000551594 BLMP54132 1417 aaPredicted RBP25.5■■□□□ 1.67
CTDSP2-207ENST00000551594 RBM6P78332 1123 aaKnown RBP25.5■■□□□ 1.67
CTDSP2-207ENST00000551594 SPATA31A5Q5VU36 1347 aa25.5■■□□□ 1.67
CTDSP2-207ENST00000551594 SPATA31A7Q8IWB4 1347 aa25.5■■□□□ 1.67
CTDSP2-207ENST00000551594 GLI3P10071 1580 aa25.49■■□□□ 1.67
CTDSP2-207ENST00000551594 ERBB3P21860 1342 aa25.49■■□□□ 1.67
CTDSP2-207ENST00000551594 WDR17Q8IZU2 1322 aa25.49■■□□□ 1.67
CTDSP2-207ENST00000551594 TOM1L2Q6ZVM7 507 aa25.49■■□□□ 1.67
CTDSP2-207ENST00000551594 USP35Q9P2H5 1018 aa25.49■■□□□ 1.67
CTDSP2-207ENST00000551594 KIF24Q5T7B8 1368 aa25.48■■□□□ 1.67
CTDSP2-207ENST00000551594 INSRP06213 1382 aa25.47■■□□□ 1.67
CTDSP2-207ENST00000551594 SPATA31A1Q5TZJ5 1347 aa25.47■■□□□ 1.67
CTDSP2-207ENST00000551594 SMG6Q86US8 1419 aaKnown RBP25.46■■□□□ 1.67
CTDSP2-207ENST00000551594 MTHFSP49914 203 aa25.46■■□□□ 1.67
CTDSP2-207ENST00000551594 RGPD2P0DJD1 1756 aa25.46■■□□□ 1.67
CTDSP2-207ENST00000551594 CRB1P82279 1406 aa25.46■■□□□ 1.67
CTDSP2-207ENST00000551594 NLRP2Q9NX02 1062 aa25.45■■□□□ 1.66
CTDSP2-207ENST00000551594 PARD3Q8TEW0 1356 aa25.44■■□□□ 1.66
CTDSP2-207ENST00000551594 PPP2R1AP30153 589 aa25.43■■□□□ 1.66
CTDSP2-207ENST00000551594 FAM98CQ17RN3 349 aaKnown RBP25.43■■□□□ 1.66
CTDSP2-207ENST00000551594 CARD10Q9BWT7 1032 aa25.42■■□□□ 1.66
CTDSP2-207ENST00000551594 ILDR2Q71H61 639 aa25.41■■□□□ 1.66
CTDSP2-207ENST00000551594 TCP11L2Q8N4U5 519 aa25.41■■□□□ 1.66
CTDSP2-207ENST00000551594 CDK12Q9NYV4 1490 aaPredicted RBP25.4■■□□□ 1.66
CTDSP2-207ENST00000551594 EIF4A2Q14240 407 aaKnown RBP25.39■■□□□ 1.66
CTDSP2-207ENST00000551594 RALBP1Q15311 655 aa25.39■■□□□ 1.66
CTDSP2-207ENST00000551594 NBPF6Q5VWK0 638 aa25.39■■□□□ 1.66
CTDSP2-207ENST00000551594 NBPF4Q96M43 638 aa25.39■■□□□ 1.66
CTDSP2-207ENST00000551594 USHBP1Q8N6Y0 703 aa25.38■■□□□ 1.65
CTDSP2-207ENST00000551594 FAM208AQ9UK61 1670 aaKnown RBP25.38■■□□□ 1.65
CTDSP2-207ENST00000551594 RGS12O14924 1447 aa25.37■■□□□ 1.65
CTDSP2-207ENST00000551594 A0A0G2JS52 829 aa25.36■■□□□ 1.65
CTDSP2-207ENST00000551594 ONECUT3O60422 494 aaPredicted RBP25.36■■□□□ 1.65
CTDSP2-207ENST00000551594 MYT1Q01538 1121 aa25.36■■□□□ 1.65
CTDSP2-207ENST00000551594 SEPT12Q8IYM1 358 aa25.36■■□□□ 1.65
CTDSP2-207ENST00000551594 PRKRIP1Q9H875 184 aaPredicted RBP25.36■■□□□ 1.65
CTDSP2-207ENST00000551594 THRAP3Q9Y2W1 955 aaKnown RBP25.36■■□□□ 1.65
CTDSP2-207ENST00000551594 BARGINQ6ZT62 677 aa25.35■■□□□ 1.65
CTDSP2-207ENST00000551594 EYA1Q99502 592 aa25.34■■□□□ 1.65
CTDSP2-207ENST00000551594 IL13P35225 146 aa25.33■■□□□ 1.65
CTDSP2-207ENST00000551594 WNK3Q9BYP7 1800 aa25.33■■□□□ 1.64
CTDSP2-207ENST00000551594 BRWD3Q6RI45 1802 aa25.32■■□□□ 1.64
CTDSP2-207ENST00000551594 THSD7AQ9UPZ6 1657 aa25.32■■□□□ 1.64
CTDSP2-207ENST00000551594 COL3A1P02461 1466 aaPredicted RBP25.31■■□□□ 1.64
CTDSP2-207ENST00000551594 DIAPH1O60610 1272 aaKnown RBP25.3■■□□□ 1.64
CTDSP2-207ENST00000551594 MYBBP1AQ9BQG0 1328 aaKnown RBP25.3■■□□□ 1.64
CTDSP2-207ENST00000551594 DISP2A7MBM2 1401 aa25.29■■□□□ 1.64
CTDSP2-207ENST00000551594 IL2RBP14784 551 aa25.28■■□□□ 1.64
CTDSP2-207ENST00000551594 CFAP53Q96M91 514 aa25.28■■□□□ 1.64
CTDSP2-207ENST00000551594 RGPD1P0DJD0 1748 aa25.26■■□□□ 1.63
CTDSP2-207ENST00000551594 PARP4Q9UKK3 1724 aaKnown RBP25.26■■□□□ 1.63
CTDSP2-207ENST00000551594 ANP32CO43423 234 aa25.25■■□□□ 1.63
CTDSP2-207ENST00000551594 CDCA7Q9BWT1 371 aaPredicted RBP25.25■■□□□ 1.63
CTDSP2-207ENST00000551594 IGSF1Q8N6C5 1336 aa25.25■■□□□ 1.63
CTDSP2-207ENST00000551594 MEGF6O75095 1541 aa25.24■■□□□ 1.63
CTDSP2-207ENST00000551594 NCAPD2Q15021 1401 aa25.24■■□□□ 1.63
CTDSP2-207ENST00000551594 AEBP1Q8IUX7 1158 aa25.24■■□□□ 1.63
CTDSP2-207ENST00000551594 LRRC37A3O60309 1634 aa25.23■■□□□ 1.63
CTDSP2-207ENST00000551594 U2SURPO15042 1029 aaKnown RBP25.23■■□□□ 1.63
CTDSP2-207ENST00000551594 DDB1Q16531 1140 aa25.23■■□□□ 1.63
CTDSP2-207ENST00000551594 KRT27Q7Z3Y8 459 aa25.23■■□□□ 1.63
CTDSP2-207ENST00000551594 FAM182BQ5T319 152 aa25.22■■□□□ 1.63
CTDSP2-207ENST00000551594 SULT6B1Q6IMI4 303 aa25.22■■□□□ 1.63
CTDSP2-207ENST00000551594 RAPGEF4Q8WZA2 1011 aa25.22■■□□□ 1.63
CTDSP2-207ENST00000551594 HMOX1P09601 288 aa25.21■■□□□ 1.63
CTDSP2-207ENST00000551594 EXOC5O00471 708 aa25.2■■□□□ 1.62
CTDSP2-207ENST00000551594 TATP17735 454 aaPredicted RBP25.2■■□□□ 1.62
CTDSP2-207ENST00000551594 PDE3BQ13370 1112 aa25.2■■□□□ 1.62
CTDSP2-207ENST00000551594 OVOS2A0A0G2JMS6 1433 aa25.18■■□□□ 1.62
CTDSP2-207ENST00000551594 NUDCQ9Y266 331 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms