RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 MCM6Q14566 821 aa6.9□□□□□ -1.3
LSM3P2-201ENST00000551246 PTPRNQ16849 979 aa6.9□□□□□ -1.3
LSM3P2-201ENST00000551246 BANK1Q8NDB2 785 aa6.9□□□□□ -1.3
LSM3P2-201ENST00000551246 HELBQ8NG08 1087 aaPredicted RBP6.9□□□□□ -1.3
LSM3P2-201ENST00000551246 RNF223E7ERA6 249 aa6.89□□□□□ -1.31
LSM3P2-201ENST00000551246 PPP1R18Q6NYC8 613 aa6.89□□□□□ -1.31
LSM3P2-201ENST00000551246 MTMR14Q8NCE2 650 aa6.89□□□□□ -1.31
LSM3P2-201ENST00000551246 LRRN4Q8WUT4 740 aa6.89□□□□□ -1.31
LSM3P2-201ENST00000551246 HIRIP3Q9BW71 556 aaPredicted RBP6.89□□□□□ -1.31
LSM3P2-201ENST00000551246 HMX1Q9NP08 348 aaPredicted RBP6.89□□□□□ -1.31
LSM3P2-201ENST00000551246 SNRKQ9NRH2 765 aa6.89□□□□□ -1.31
LSM3P2-201ENST00000551246 LRPPRCP42704 1394 aaKnown RBP6.89□□□□□ -1.31
LSM3P2-201ENST00000551246 SPATA31E1Q6ZUB1 1445 aa6.88□□□□□ -1.31
LSM3P2-201ENST00000551246 DHX29Q7Z478 1369 aaKnown RBP6.88□□□□□ -1.31
LSM3P2-201ENST00000551246 A0A0G2JS52 829 aa6.88□□□□□ -1.31
LSM3P2-201ENST00000551246 SOCS7O14512 581 aa6.88□□□□□ -1.31
LSM3P2-201ENST00000551246 PPEF1O14829 653 aaPredicted RBP6.88□□□□□ -1.31
LSM3P2-201ENST00000551246 XRCC6P12956 609 aaKnown RBP eCLIP6.88□□□□□ -1.31
LSM3P2-201ENST00000551246 RRP1P56182 461 aaKnown RBP6.88□□□□□ -1.31
LSM3P2-201ENST00000551246 UTP14CQ5TAP6 766 aaKnown RBP6.88□□□□□ -1.31
LSM3P2-201ENST00000551246 SMAP1Q8IYB5 467 aaPredicted RBP6.88□□□□□ -1.31
LSM3P2-201ENST00000551246 TSC1Q92574 1164 aa6.88□□□□□ -1.31
LSM3P2-201ENST00000551246 GJD4Q96KN9 370 aaPredicted RBP6.88□□□□□ -1.31
LSM3P2-201ENST00000551246 TIAM1Q13009 1591 aa6.87□□□□□ -1.31
LSM3P2-201ENST00000551246 ARHGAP35Q9NRY4 1499 aa6.87□□□□□ -1.31
LSM3P2-201ENST00000551246 UACAQ9BZF9 1416 aa6.87□□□□□ -1.31
LSM3P2-201ENST00000551246 INSRP06213 1382 aa6.87□□□□□ -1.31
LSM3P2-201ENST00000551246 KDM2BQ8NHM5 1336 aa6.87□□□□□ -1.31
LSM3P2-201ENST00000551246 HSPA5P11021 654 aaKnown RBP6.87□□□□□ -1.31
LSM3P2-201ENST00000551246 PLA2G2CQ5R387 149 aa6.87□□□□□ -1.31
LSM3P2-201ENST00000551246 ANKLE1Q8NAG6 615 aa6.87□□□□□ -1.31
LSM3P2-201ENST00000551246 NUDT12Q9BQG2 462 aa6.87□□□□□ -1.31
LSM3P2-201ENST00000551246 TRIM34Q9BYJ4 488 aa6.87□□□□□ -1.31
LSM3P2-201ENST00000551246 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.87□□□□□ -1.31
LSM3P2-201ENST00000551246 FCF1Q9Y324 198 aaKnown RBP6.87□□□□□ -1.31
LSM3P2-201ENST00000551246 LRRC9Q6ZRR7 1453 aa6.86□□□□□ -1.31
LSM3P2-201ENST00000551246 PHLDB1Q86UU1 1377 aa6.86□□□□□ -1.31
LSM3P2-201ENST00000551246 GPR37L1O60883 481 aa6.86□□□□□ -1.31
LSM3P2-201ENST00000551246 CCNYL3P0C7X3 344 aa6.86□□□□□ -1.31
LSM3P2-201ENST00000551246 NPM2Q86SE8 214 aaKnown RBP6.86□□□□□ -1.31
LSM3P2-201ENST00000551246 EXOC6Q8TAG9 804 aa6.86□□□□□ -1.31
LSM3P2-201ENST00000551246 EMID1Q96A84 441 aaPredicted RBP6.86□□□□□ -1.31
LSM3P2-201ENST00000551246 NAP1L5Q96NT1 182 aaPredicted RBP6.86□□□□□ -1.31
LSM3P2-201ENST00000551246 MAP7D2Q96T17 732 aa6.86□□□□□ -1.31
LSM3P2-201ENST00000551246 MRS2Q9HD23 443 aa6.86□□□□□ -1.31
LSM3P2-201ENST00000551246 POGKQ9P215 609 aa6.86□□□□□ -1.31
LSM3P2-201ENST00000551246 MAP10Q9P2G4 905 aa6.86□□□□□ -1.31
LSM3P2-201ENST00000551246 TONSLQ96HA7 1378 aa6.85□□□□□ -1.31
LSM3P2-201ENST00000551246 A0A0U1RQG5 324 aaPredicted RBP6.85□□□□□ -1.31
LSM3P2-201ENST00000551246 GTF2E1P29083 439 aaPredicted RBP6.85□□□□□ -1.31
LSM3P2-201ENST00000551246 RIPK4P57078 832 aa6.85□□□□□ -1.31
LSM3P2-201ENST00000551246 EPS8L1Q8TE68 723 aa6.85□□□□□ -1.31
LSM3P2-201ENST00000551246 PNISRQ8TF01 805 aaKnown RBP6.85□□□□□ -1.31
LSM3P2-201ENST00000551246 ANTXR1Q9H6X2 564 aa6.85□□□□□ -1.31
LSM3P2-201ENST00000551246 EVA1BQ9NVM1 165 aa6.85□□□□□ -1.31
LSM3P2-201ENST00000551246 ISY1Q9ULR0 285 aaKnown RBP6.85□□□□□ -1.31
LSM3P2-201ENST00000551246 SMARCA4P51532 1647 aa6.84□□□□□ -1.31
LSM3P2-201ENST00000551246 USP19O94966 1318 aa6.84□□□□□ -1.31
LSM3P2-201ENST00000551246 FLIIQ13045 1269 aa6.84□□□□□ -1.31
LSM3P2-201ENST00000551246 C8orf34Q49A92 452 aa6.84□□□□□ -1.31
LSM3P2-201ENST00000551246 PTCRAQ6ISU1 281 aaPredicted RBP6.84□□□□□ -1.31
LSM3P2-201ENST00000551246 HFM1A2PYH4 1435 aa6.84□□□□□ -1.32
LSM3P2-201ENST00000551246 GGCXP38435 758 aa6.83□□□□□ -1.32
LSM3P2-201ENST00000551246 RGS3P49796 1198 aa6.83□□□□□ -1.32
LSM3P2-201ENST00000551246 KCNH2Q12809 1159 aa6.83□□□□□ -1.32
LSM3P2-201ENST00000551246 NR6A1Q15406 480 aa6.83□□□□□ -1.32
LSM3P2-201ENST00000551246 ERBB4Q15303 1308 aa6.82□□□□□ -1.32
LSM3P2-201ENST00000551246 ZMYM4Q5VZL5 1548 aa6.82□□□□□ -1.32
LSM3P2-201ENST00000551246 DENND4BO75064 1496 aaPredicted RBP6.82□□□□□ -1.32
LSM3P2-201ENST00000551246 ESPNB1AK53 854 aa6.82□□□□□ -1.32
LSM3P2-201ENST00000551246 PDE3BQ13370 1112 aa6.82□□□□□ -1.32
LSM3P2-201ENST00000551246 TAF7LQ5H9L4 462 aa6.82□□□□□ -1.32
LSM3P2-201ENST00000551246 FAM9BQ8IZU0 186 aa6.82□□□□□ -1.32
LSM3P2-201ENST00000551246 TOP2BQ02880 1626 aa6.81□□□□□ -1.32
LSM3P2-201ENST00000551246 OFD1O75665 1012 aa6.81□□□□□ -1.32
LSM3P2-201ENST00000551246 EIF4G2P78344 907 aaKnown RBP eCLIP6.81□□□□□ -1.32
LSM3P2-201ENST00000551246 CCDC24Q8N4L8 307 aa6.81□□□□□ -1.32
LSM3P2-201ENST00000551246 IPO4Q8TEX9 1081 aaKnown RBP6.81□□□□□ -1.32
LSM3P2-201ENST00000551246 UNC93B1Q9H1C4 597 aa6.81□□□□□ -1.32
LSM3P2-201ENST00000551246 CCDC144AA2RUR9 1427 aa6.81□□□□□ -1.32
LSM3P2-201ENST00000551246 AQRO60306 1485 aaKnown RBP eCLIP6.8□□□□□ -1.32
LSM3P2-201ENST00000551246 CCDC18Q5T9S5 1454 aa6.8□□□□□ -1.32
LSM3P2-201ENST00000551246 MRE11P49959 708 aa6.8□□□□□ -1.32
LSM3P2-201ENST00000551246 DMTNQ08495 405 aa6.8□□□□□ -1.32
LSM3P2-201ENST00000551246 LIAT1Q6ZQX7 453 aa6.8□□□□□ -1.32
LSM3P2-201ENST00000551246 POM121Q96HA1 1249 aa6.8□□□□□ -1.32
LSM3P2-201ENST00000551246 SCAPERQ9BY12 1400 aa6.8□□□□□ -1.32
LSM3P2-201ENST00000551246 COG6Q9Y2V7 657 aa6.8□□□□□ -1.32
LSM3P2-201ENST00000551246 KIF7Q2M1P5 1343 aa6.79□□□□□ -1.32
LSM3P2-201ENST00000551246 ARID4BQ4LE39 1312 aaPredicted RBP6.79□□□□□ -1.32
LSM3P2-201ENST00000551246 POLR1AO95602 1720 aaPredicted RBP6.79□□□□□ -1.32
LSM3P2-201ENST00000551246 GOLGA6L3A6NEY3 463 aa6.79□□□□□ -1.32
LSM3P2-201ENST00000551246 CTHP32929 405 aa6.79□□□□□ -1.32
LSM3P2-201ENST00000551246 TBC1D2BQ9UPU7 963 aa6.79□□□□□ -1.32
LSM3P2-201ENST00000551246 CFAP43Q8NDM7 1665 aa6.79□□□□□ -1.32
LSM3P2-201ENST00000551246 KTN1Q86UP2 1357 aaKnown RBP6.79□□□□□ -1.32
LSM3P2-201ENST00000551246 BIVM-ERCC5R4GMW8 1640 aa6.79□□□□□ -1.32
LSM3P2-201ENST00000551246 NLRP1Q9C000 1473 aa6.79□□□□□ -1.32
LSM3P2-201ENST00000551246 NAIPQ13075 1403 aa6.78□□□□□ -1.32
LSM3P2-201ENST00000551246 PTPRKQ15262 1439 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms