RNA–Protein interactions for RNA: ENST00000551088.1

TMTC3-204, Transcript of transmembrane and tetratricopeptide repeat containing 3, humanhuman

TSL 3

Gene TMTC3, Length 646 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC3-204ENST00000551088 FGD6Q6ZV73 1430 aa14.28□□□□□ -0.12
TMTC3-204ENST00000551088 TATDN2Q93075 761 aa14.28□□□□□ -0.12
TMTC3-204ENST00000551088 CHIC2Q9UKJ5 165 aa14.28□□□□□ -0.12
TMTC3-204ENST00000551088 MYO5BQ9ULV0 1848 aa14.28□□□□□ -0.12
TMTC3-204ENST00000551088 MED1Q15648 1581 aaPredicted RBP14.27□□□□□ -0.12
TMTC3-204ENST00000551088 SCAF11Q99590 1463 aaKnown RBP14.27□□□□□ -0.12
TMTC3-204ENST00000551088 RGS20O76081 388 aa14.27□□□□□ -0.13
TMTC3-204ENST00000551088 SAMD7Q7Z3H4 446 aa14.27□□□□□ -0.13
TMTC3-204ENST00000551088 LRRC7Q96NW7 1537 aa14.26□□□□□ -0.13
TMTC3-204ENST00000551088 ARHGAP31Q2M1Z3 1444 aa14.26□□□□□ -0.13
TMTC3-204ENST00000551088 C3orf80F5H4A9 247 aa14.26□□□□□ -0.13
TMTC3-204ENST00000551088 TXNDC2Q86VQ3 553 aa14.26□□□□□ -0.13
TMTC3-204ENST00000551088 KDM5AP29375 1690 aaKnown RBP14.26□□□□□ -0.13
TMTC3-204ENST00000551088 ALKQ9UM73 1620 aa14.26□□□□□ -0.13
TMTC3-204ENST00000551088 SLIT1O75093 1534 aa14.25□□□□□ -0.13
TMTC3-204ENST00000551088 ANKRD30AQ9BXX3 1397 aa14.25□□□□□ -0.13
TMTC3-204ENST00000551088 PPP4CP60510 307 aa14.25□□□□□ -0.13
TMTC3-204ENST00000551088 EID1Q9Y6B2 187 aa14.25□□□□□ -0.13
TMTC3-204ENST00000551088 KCNC4Q03721 635 aa14.24□□□□□ -0.13
TMTC3-204ENST00000551088 NUDT18Q6ZVK8 323 aa14.24□□□□□ -0.13
TMTC3-204ENST00000551088 ARHGAP23Q9P227 1491 aa14.24□□□□□ -0.13
TMTC3-204ENST00000551088 LTKP29376 864 aa14.23□□□□□ -0.13
TMTC3-204ENST00000551088 MLLT3P42568 568 aaPredicted RBP14.23□□□□□ -0.13
TMTC3-204ENST00000551088 EFCAB6Q5THR3 1501 aa14.21□□□□□ -0.13
TMTC3-204ENST00000551088 FAM50AQ14320 339 aaKnown RBP14.21□□□□□ -0.13
TMTC3-204ENST00000551088 PADI6Q6TGC4 694 aa14.21□□□□□ -0.13
TMTC3-204ENST00000551088 NPDC1Q9NQX5 325 aaPredicted RBP14.21□□□□□ -0.13
TMTC3-204ENST00000551088 LMTK2Q8IWU2 1503 aa14.2□□□□□ -0.14
TMTC3-204ENST00000551088 RNF40O75150 1001 aa14.2□□□□□ -0.14
TMTC3-204ENST00000551088 HDGFP51858 240 aaKnown RBP14.2□□□□□ -0.14
TMTC3-204ENST00000551088 GCC2Q8IWJ2 1684 aa14.2□□□□□ -0.14
TMTC3-204ENST00000551088 TMEM2Q9UHN6 1383 aa14.19□□□□□ -0.14
TMTC3-204ENST00000551088 IDI1Q13907 227 aa14.18□□□□□ -0.14
TMTC3-204ENST00000551088 TTC13Q8NBP0 860 aa14.18□□□□□ -0.14
TMTC3-204ENST00000551088 ADGRB3O60242 1522 aa14.17□□□□□ -0.14
TMTC3-204ENST00000551088 ADGRL2O95490 1459 aa14.17□□□□□ -0.14
TMTC3-204ENST00000551088 TET3O43151 1660 aa14.17□□□□□ -0.14
TMTC3-204ENST00000551088 CHD2O14647 1828 aaKnown RBP14.15□□□□□ -0.14
TMTC3-204ENST00000551088 SLC26A8Q96RN1 970 aa14.14□□□□□ -0.15
TMTC3-204ENST00000551088 NOS1P29475 1434 aa14.14□□□□□ -0.15
TMTC3-204ENST00000551088 ANKRD50Q9ULJ7 1429 aa14.14□□□□□ -0.15
TMTC3-204ENST00000551088 ROBO1Q9Y6N7 1651 aa14.13□□□□□ -0.15
TMTC3-204ENST00000551088 E9PCH4 1651 aa14.12□□□□□ -0.15
TMTC3-204ENST00000551088 PROSER2Q86WR7 435 aaPredicted RBP14.12□□□□□ -0.15
TMTC3-204ENST00000551088 SLC52A1Q9NWF4 448 aa14.12□□□□□ -0.15
TMTC3-204ENST00000551088 UNC13BO14795 1591 aa14.12□□□□□ -0.15
TMTC3-204ENST00000551088 RPRD2Q5VT52 1461 aaKnown RBP14.12□□□□□ -0.15
TMTC3-204ENST00000551088 KCNA6P17658 529 aa14.11□□□□□ -0.15
TMTC3-204ENST00000551088 IRX2Q9BZI1 471 aaPredicted RBP14.11□□□□□ -0.15
TMTC3-204ENST00000551088 TMEM94Q12767 1356 aa14.1□□□□□ -0.15
TMTC3-204ENST00000551088 TMEM131LA2VDJ0 1609 aa14.1□□□□□ -0.15
TMTC3-204ENST00000551088 NWD1Q149M9 1564 aa14.09□□□□□ -0.15
TMTC3-204ENST00000551088 PPP1R15AO75807 674 aaPredicted RBP14.09□□□□□ -0.15
TMTC3-204ENST00000551088 PTGDRQ13258 359 aa14.09□□□□□ -0.15
TMTC3-204ENST00000551088 SWT1Q5T5J6 900 aaKnown RBP14.09□□□□□ -0.15
TMTC3-204ENST00000551088 NECTIN2Q92692 538 aa14.09□□□□□ -0.15
TMTC3-204ENST00000551088 PHLPP1O60346 1717 aa14.09□□□□□ -0.15
TMTC3-204ENST00000551088 TJAP1Q5JTD0 557 aa14.08□□□□□ -0.16
TMTC3-204ENST00000551088 SLF2Q8IX21 1173 aa14.08□□□□□ -0.16
TMTC3-204ENST00000551088 IQGAP3Q86VI3 1631 aa14.08□□□□□ -0.16
TMTC3-204ENST00000551088 SLC4A3P48751 1232 aa14.07□□□□□ -0.16
TMTC3-204ENST00000551088 MTRQ99707 1265 aa14.07□□□□□ -0.16
TMTC3-204ENST00000551088 RIMS2Q9UQ26 1411 aa14.07□□□□□ -0.16
TMTC3-204ENST00000551088 NKTRP30414 1462 aaKnown RBP14.06□□□□□ -0.16
TMTC3-204ENST00000551088 NUTM2FA1L443 756 aa14.06□□□□□ -0.16
TMTC3-204ENST00000551088 EYA1Q99502 592 aa14.06□□□□□ -0.16
TMTC3-204ENST00000551088 FAM135BQ49AJ0 1406 aa14.06□□□□□ -0.16
TMTC3-204ENST00000551088 SEMA3EO15041 775 aa14.05□□□□□ -0.16
TMTC3-204ENST00000551088 ITGAEP38570 1179 aa14.05□□□□□ -0.16
TMTC3-204ENST00000551088 APLP1P51693 650 aa14.05□□□□□ -0.16
TMTC3-204ENST00000551088 IL21Q9HBE4 155 aa14.05□□□□□ -0.16
TMTC3-204ENST00000551088 MSH6P52701 1360 aa14.05□□□□□ -0.16
TMTC3-204ENST00000551088 ZFYVE9O95405 1425 aa14.05□□□□□ -0.16
TMTC3-204ENST00000551088 PLEKHG1Q9ULL1 1385 aa14.04□□□□□ -0.16
TMTC3-204ENST00000551088 SPHKAPQ2M3C7 1700 aa14.04□□□□□ -0.16
TMTC3-204ENST00000551088 NUTM2DQ5VT03 806 aaPredicted RBP14.02□□□□□ -0.17
TMTC3-204ENST00000551088 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.01□□□□□ -0.17
TMTC3-204ENST00000551088 ROCK1Q13464 1354 aa14.01□□□□□ -0.17
TMTC3-204ENST00000551088 C14orf37Q86TY3 774 aa14.01□□□□□ -0.17
TMTC3-204ENST00000551088 PPARGC1BQ86YN6 1023 aaKnown RBP14.01□□□□□ -0.17
TMTC3-204ENST00000551088 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.01□□□□□ -0.17
TMTC3-204ENST00000551088 KIF1BO60333 1816 aa14□□□□□ -0.17
TMTC3-204ENST00000551088 RBM46Q8TBY0 533 aaKnown RBP14□□□□□ -0.17
TMTC3-204ENST00000551088 DIP2AQ14689 1571 aa14□□□□□ -0.17
TMTC3-204ENST00000551088 NUP155O75694 1391 aa13.99□□□□□ -0.17
TMTC3-204ENST00000551088 LMOD2Q6P5Q4 547 aa13.99□□□□□ -0.17
TMTC3-204ENST00000551088 SLAIN2Q9P270 581 aa13.99□□□□□ -0.17
TMTC3-204ENST00000551088 RGS17Q9UGC6 210 aaPredicted RBP13.99□□□□□ -0.17
TMTC3-204ENST00000551088 DNAJB2P25686 324 aa13.98□□□□□ -0.17
TMTC3-204ENST00000551088 TBX22Q9Y458 520 aa13.98□□□□□ -0.17
TMTC3-204ENST00000551088 ADGRG1Q9Y653 693 aa13.98□□□□□ -0.17
TMTC3-204ENST00000551088 TRPM2O94759 1503 aa13.97□□□□□ -0.17
TMTC3-204ENST00000551088 FCHSD2O94868 740 aa13.97□□□□□ -0.17
TMTC3-204ENST00000551088 ZNF516Q92618 1163 aa13.97□□□□□ -0.17
TMTC3-204ENST00000551088 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.96□□□□□ -0.17
TMTC3-204ENST00000551088 SETD1AO15047 1707 aaKnown RBP13.95□□□□□ -0.18
TMTC3-204ENST00000551088 COL16A1Q07092 1604 aaPredicted RBP13.95□□□□□ -0.18
TMTC3-204ENST00000551088 COPS2P61201 443 aa13.95□□□□□ -0.18
TMTC3-204ENST00000551088 PRR14Q9BWN1 585 aa13.95□□□□□ -0.18
TMTC3-204ENST00000551088 ADAMTS13Q76LX8 1427 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms