RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 MYT1Q01538 1121 aa18.43■□□□□ 0.54
NPAS3-209ENST00000551008 DEFB132Q7Z7B7 95 aa18.43■□□□□ 0.54
NPAS3-209ENST00000551008 CRB1P82279 1406 aa18.42■□□□□ 0.54
NPAS3-209ENST00000551008 BARGINQ6ZT62 677 aa18.42■□□□□ 0.54
NPAS3-209ENST00000551008 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.42■□□□□ 0.54
NPAS3-209ENST00000551008 TMC1Q8TDI8 760 aa18.41■□□□□ 0.54
NPAS3-209ENST00000551008 USP35Q9P2H5 1018 aa18.41■□□□□ 0.54
NPAS3-209ENST00000551008 SBF2Q86WG5 1849 aa18.4■□□□□ 0.54
NPAS3-209ENST00000551008 ZBTB7CA1YPR0 619 aa18.4■□□□□ 0.54
NPAS3-209ENST00000551008 EVA1CP58658 441 aa18.4■□□□□ 0.54
NPAS3-209ENST00000551008 SOX12O15370 315 aa18.39■□□□□ 0.53
NPAS3-209ENST00000551008 TCP11L2Q8N4U5 519 aa18.39■□□□□ 0.53
NPAS3-209ENST00000551008 TIMELESSQ9UNS1 1208 aa18.39■□□□□ 0.53
NPAS3-209ENST00000551008 NINLQ9Y2I6 1382 aa18.39■□□□□ 0.53
NPAS3-209ENST00000551008 KCNH5Q8NCM2 988 aa18.38■□□□□ 0.53
NPAS3-209ENST00000551008 HDGFL2Q7Z4V5 671 aaPredicted RBP18.37■□□□□ 0.53
NPAS3-209ENST00000551008 WDR17Q8IZU2 1322 aa18.37■□□□□ 0.53
NPAS3-209ENST00000551008 DISP2A7MBM2 1401 aa18.37■□□□□ 0.53
NPAS3-209ENST00000551008 SRCAPQ6ZRS2 3230 aa18.36■□□□□ 0.53
NPAS3-209ENST00000551008 KIF20BQ96Q89 1820 aa18.36■□□□□ 0.53
NPAS3-209ENST00000551008 THRAP3Q9Y2W1 955 aaKnown RBP18.36■□□□□ 0.53
NPAS3-209ENST00000551008 ANKRD36BQ8N2N9 1353 aa18.35■□□□□ 0.53
NPAS3-209ENST00000551008 TERF2IPQ9NYB0 399 aa18.35■□□□□ 0.53
NPAS3-209ENST00000551008 RREB1Q92766 1687 aa18.34■□□□□ 0.53
NPAS3-209ENST00000551008 RGPD2P0DJD1 1756 aa18.33■□□□□ 0.53
NPAS3-209ENST00000551008 TMF1P82094 1093 aa18.31■□□□□ 0.52
NPAS3-209ENST00000551008 TOM1L2Q6ZVM7 507 aa18.31■□□□□ 0.52
NPAS3-209ENST00000551008 NUP188Q5SRE5 1749 aa18.31■□□□□ 0.52
NPAS3-209ENST00000551008 ERBB3P21860 1342 aa18.3■□□□□ 0.52
NPAS3-209ENST00000551008 FAM208AQ9UK61 1670 aaKnown RBP18.3■□□□□ 0.52
NPAS3-209ENST00000551008 SLC24A1O60721 1099 aa18.29■□□□□ 0.52
NPAS3-209ENST00000551008 TRIM37O94972 964 aa18.29■□□□□ 0.52
NPAS3-209ENST00000551008 EN1Q05925 392 aaPredicted RBP18.29■□□□□ 0.52
NPAS3-209ENST00000551008 SF3B2Q13435 895 aaKnown RBP18.29■□□□□ 0.52
NPAS3-209ENST00000551008 FAM196AQ6ZSG2 479 aa18.29■□□□□ 0.52
NPAS3-209ENST00000551008 CARD10Q9BWT7 1032 aa18.29■□□□□ 0.52
NPAS3-209ENST00000551008 FBLN1P23142 703 aa18.28■□□□□ 0.52
NPAS3-209ENST00000551008 BAG6P46379 1132 aa18.27■□□□□ 0.52
NPAS3-209ENST00000551008 PDE3BQ13370 1112 aa18.27■□□□□ 0.52
NPAS3-209ENST00000551008 CCER1Q8TC90 406 aaPredicted RBP18.27■□□□□ 0.52
NPAS3-209ENST00000551008 RGPD3A6NKT7 1758 aaPredicted RBP18.27■□□□□ 0.51
NPAS3-209ENST00000551008 RGPD4Q7Z3J3 1758 aa18.27■□□□□ 0.51
NPAS3-209ENST00000551008 OVOS2A0A0G2JMS6 1433 aa18.26■□□□□ 0.51
NPAS3-209ENST00000551008 CARD14Q9BXL6 1004 aa18.26■□□□□ 0.51
NPAS3-209ENST00000551008 CCDC7Q96M83 1385 aa18.26■□□□□ 0.51
NPAS3-209ENST00000551008 MAP3K19Q56UN5 1328 aa18.25■□□□□ 0.51
NPAS3-209ENST00000551008 TNS2Q63HR2 1409 aa18.25■□□□□ 0.51
NPAS3-209ENST00000551008 FYB1O15117 783 aa18.25■□□□□ 0.51
NPAS3-209ENST00000551008 MARCH10Q8NA82 808 aaPredicted RBP18.25■□□□□ 0.51
NPAS3-209ENST00000551008 CAMKK2Q96RR4 588 aa18.25■□□□□ 0.51
NPAS3-209ENST00000551008 SHANK3Q9BYB0 1731 aa18.25■□□□□ 0.51
NPAS3-209ENST00000551008 ANKRD26Q9UPS8 1709 aa18.24■□□□□ 0.51
NPAS3-209ENST00000551008 EZH2Q15910 746 aaKnown RBP18.24■□□□□ 0.51
NPAS3-209ENST00000551008 PTF1AQ7RTS3 328 aa18.24■□□□□ 0.51
NPAS3-209ENST00000551008 BCL9O00512 1426 aa18.23■□□□□ 0.51
NPAS3-209ENST00000551008 CSB-PGBD3P0DP91 1061 aa18.23■□□□□ 0.51
NPAS3-209ENST00000551008 DDB1Q16531 1140 aa18.23■□□□□ 0.51
NPAS3-209ENST00000551008 ANKRD24Q8TF21 1146 aa18.23■□□□□ 0.51
NPAS3-209ENST00000551008 IP6K1Q92551 441 aa18.22■□□□□ 0.51
NPAS3-209ENST00000551008 COG3Q96JB2 828 aa18.22■□□□□ 0.51
NPAS3-209ENST00000551008 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
NPAS3-209ENST00000551008 LRP5O75197 1615 aa18.22■□□□□ 0.51
NPAS3-209ENST00000551008 NSD3Q9BZ95 1437 aa18.22■□□□□ 0.51
NPAS3-209ENST00000551008 NHSQ6T4R5 1651 aa18.22■□□□□ 0.51
NPAS3-209ENST00000551008 APBA3O96018 575 aa18.2■□□□□ 0.5
NPAS3-209ENST00000551008 HSPA5P11021 654 aaKnown RBP18.2■□□□□ 0.5
NPAS3-209ENST00000551008 CDCA8Q53HL2 280 aa18.2■□□□□ 0.5
NPAS3-209ENST00000551008 CDCA7Q9BWT1 371 aaPredicted RBP18.2■□□□□ 0.5
NPAS3-209ENST00000551008 HOXC9P31274 260 aa18.19■□□□□ 0.5
NPAS3-209ENST00000551008 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
NPAS3-209ENST00000551008 PARD3Q8TEW0 1356 aa18.18■□□□□ 0.5
NPAS3-209ENST00000551008 PSDA5PKW4 1024 aaPredicted RBP18.18■□□□□ 0.5
NPAS3-209ENST00000551008 RRS1Q15050 365 aaKnown RBP18.18■□□□□ 0.5
NPAS3-209ENST00000551008 NLRP2Q9NX02 1062 aa18.18■□□□□ 0.5
NPAS3-209ENST00000551008 RTL1A6NKG5 1358 aa18.17■□□□□ 0.5
NPAS3-209ENST00000551008 BTAF1O14981 1849 aa18.16■□□□□ 0.5
NPAS3-209ENST00000551008 MEGF6O75095 1541 aa18.16■□□□□ 0.5
NPAS3-209ENST00000551008 C11orf95C9JLR9 678 aaPredicted RBP18.15■□□□□ 0.5
NPAS3-209ENST00000551008 EIF4G2P78344 907 aaKnown RBP eCLIP18.15■□□□□ 0.5
NPAS3-209ENST00000551008 LTV1Q96GA3 475 aaPredicted RBP18.15■□□□□ 0.5
NPAS3-209ENST00000551008 IL2RBP14784 551 aa18.14■□□□□ 0.49
NPAS3-209ENST00000551008 KAT6BQ8WYB5 2073 aa18.14■□□□□ 0.49
NPAS3-209ENST00000551008 DOT1LQ8TEK3 1739 aa18.13■□□□□ 0.49
NPAS3-209ENST00000551008 EXOC5O00471 708 aa18.13■□□□□ 0.49
NPAS3-209ENST00000551008 R3HDM1Q15032 1099 aaKnown RBP18.13■□□□□ 0.49
NPAS3-209ENST00000551008 BCL11BQ9C0K0 894 aaPredicted RBP18.13■□□□□ 0.49
NPAS3-209ENST00000551008 AMPHP49418 695 aa18.12■□□□□ 0.49
NPAS3-209ENST00000551008 KCNQ2O43526 872 aa18.11■□□□□ 0.49
NPAS3-209ENST00000551008 PROM2Q8N271 834 aa18.11■□□□□ 0.49
NPAS3-209ENST00000551008 INSRP06213 1382 aa18.11■□□□□ 0.49
NPAS3-209ENST00000551008 CASZ1Q86V15 1759 aa18.11■□□□□ 0.49
NPAS3-209ENST00000551008 PAPPAQ13219 1627 aa18.1■□□□□ 0.49
NPAS3-209ENST00000551008 NCAPD2Q15021 1401 aa18.1■□□□□ 0.49
NPAS3-209ENST00000551008 PLSCR1O15162 318 aa18.1■□□□□ 0.49
NPAS3-209ENST00000551008 HSP90AB2PQ58FF8 381 aa18.1■□□□□ 0.49
NPAS3-209ENST00000551008 NBPF6Q5VWK0 638 aa18.1■□□□□ 0.49
NPAS3-209ENST00000551008 NBPF4Q96M43 638 aa18.1■□□□□ 0.49
NPAS3-209ENST00000551008 EMILIN1Q9Y6C2 1016 aa18.1■□□□□ 0.49
NPAS3-209ENST00000551008 FLT4P35916 1363 aa18.09■□□□□ 0.49
NPAS3-209ENST00000551008 KIF24Q5T7B8 1368 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms