RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.34■□□□□ 0.21
CPNE8-207ENST00000550863 TCP11L2Q8N4U5 519 aa16.34■□□□□ 0.21
CPNE8-207ENST00000550863 NME9Q86XW9 330 aa16.33■□□□□ 0.2
CPNE8-207ENST00000550863 A0A1W2PP64 1363 aa16.33■□□□□ 0.2
CPNE8-207ENST00000550863 RGPD3A6NKT7 1758 aaPredicted RBP16.32■□□□□ 0.2
CPNE8-207ENST00000550863 RGPD4Q7Z3J3 1758 aa16.32■□□□□ 0.2
CPNE8-207ENST00000550863 KIF20BQ96Q89 1820 aa16.31■□□□□ 0.2
CPNE8-207ENST00000550863 TRIM26Q12899 539 aaPredicted RBP16.31■□□□□ 0.2
CPNE8-207ENST00000550863 ABCC6O95255 1503 aa16.3■□□□□ 0.2
CPNE8-207ENST00000550863 OVOS2A0A0J9YW53 1432 aa16.3■□□□□ 0.2
CPNE8-207ENST00000550863 OVOS2Q6IE36 1432 aa16.3■□□□□ 0.2
CPNE8-207ENST00000550863 TTC21AQ8NDW8 1320 aa16.3■□□□□ 0.2
CPNE8-207ENST00000550863 ARHGEF25Q86VW2 580 aa16.3■□□□□ 0.2
CPNE8-207ENST00000550863 TMC1Q8TDI8 760 aa16.3■□□□□ 0.2
CPNE8-207ENST00000550863 SLC12A5Q9H2X9 1139 aa16.3■□□□□ 0.2
CPNE8-207ENST00000550863 WDR17Q8IZU2 1322 aa16.29■□□□□ 0.2
CPNE8-207ENST00000550863 PDE3BQ13370 1112 aa16.29■□□□□ 0.2
CPNE8-207ENST00000550863 TOM1L2Q6ZVM7 507 aa16.29■□□□□ 0.2
CPNE8-207ENST00000550863 OVOS2A0A0G2JMS6 1433 aa16.28■□□□□ 0.2
CPNE8-207ENST00000550863 R3HDM1Q15032 1099 aaKnown RBP16.28■□□□□ 0.2
CPNE8-207ENST00000550863 FAM196AQ6ZSG2 479 aa16.28■□□□□ 0.2
CPNE8-207ENST00000550863 PTF1AQ7RTS3 328 aa16.28■□□□□ 0.2
CPNE8-207ENST00000550863 CAMKK2Q96RR4 588 aa16.28■□□□□ 0.2
CPNE8-207ENST00000550863 TESK2Q96S53 571 aa16.28■□□□□ 0.2
CPNE8-207ENST00000550863 EDC4Q6P2E9 1401 aaKnown RBP16.28■□□□□ 0.2
CPNE8-207ENST00000550863 ST20-MTHFSA0A0A6YYL1 179 aa16.27■□□□□ 0.2
CPNE8-207ENST00000550863 APBA3O96018 575 aa16.27■□□□□ 0.2
CPNE8-207ENST00000550863 ZNF692Q9BU19 519 aaPredicted RBP16.27■□□□□ 0.2
CPNE8-207ENST00000550863 SHANK3Q9BYB0 1731 aa16.27■□□□□ 0.19
CPNE8-207ENST00000550863 NHSQ6T4R5 1651 aa16.27■□□□□ 0.19
CPNE8-207ENST00000550863 FAM208AQ9UK61 1670 aaKnown RBP16.27■□□□□ 0.19
CPNE8-207ENST00000550863 USP31Q70CQ4 1352 aa16.26■□□□□ 0.19
CPNE8-207ENST00000550863 THRAP3Q9Y2W1 955 aaKnown RBP16.26■□□□□ 0.19
CPNE8-207ENST00000550863 BTAF1O14981 1849 aa16.24■□□□□ 0.19
CPNE8-207ENST00000550863 CSB-PGBD3P0DP91 1061 aa16.24■□□□□ 0.19
CPNE8-207ENST00000550863 KCNH5Q8NCM2 988 aa16.24■□□□□ 0.19
CPNE8-207ENST00000550863 TNS2Q63HR2 1409 aa16.24■□□□□ 0.19
CPNE8-207ENST00000550863 USP47Q96K76 1375 aa16.24■□□□□ 0.19
CPNE8-207ENST00000550863 KAT6BQ8WYB5 2073 aa16.23■□□□□ 0.19
CPNE8-207ENST00000550863 CASZ1Q86V15 1759 aa16.23■□□□□ 0.19
CPNE8-207ENST00000550863 DOT1LQ8TEK3 1739 aa16.22■□□□□ 0.19
CPNE8-207ENST00000550863 DDB1Q16531 1140 aa16.22■□□□□ 0.19
CPNE8-207ENST00000550863 HDGFL2Q7Z4V5 671 aaPredicted RBP16.22■□□□□ 0.19
CPNE8-207ENST00000550863 MARCH10Q8NA82 808 aaPredicted RBP16.22■□□□□ 0.19
CPNE8-207ENST00000550863 ERBB3P21860 1342 aa16.21■□□□□ 0.19
CPNE8-207ENST00000550863 FBLN1P23142 703 aa16.21■□□□□ 0.19
CPNE8-207ENST00000550863 CARD10Q9BWT7 1032 aa16.19■□□□□ 0.18
CPNE8-207ENST00000550863 PARD3Q8TEW0 1356 aa16.18■□□□□ 0.18
CPNE8-207ENST00000550863 TUBGCP6Q96RT7 1819 aa16.17■□□□□ 0.18
CPNE8-207ENST00000550863 ANKRD36BQ8N2N9 1353 aa16.17■□□□□ 0.18
CPNE8-207ENST00000550863 CCDC7Q96M83 1385 aa16.17■□□□□ 0.18
CPNE8-207ENST00000550863 PAPPAQ13219 1627 aa16.17■□□□□ 0.18
CPNE8-207ENST00000550863 ANKRD24Q8TF21 1146 aa16.17■□□□□ 0.18
CPNE8-207ENST00000550863 ANO8Q9HCE9 1232 aaPredicted RBP16.17■□□□□ 0.18
CPNE8-207ENST00000550863 TERF2IPQ9NYB0 399 aa16.17■□□□□ 0.18
CPNE8-207ENST00000550863 NLRP2Q9NX02 1062 aa16.16■□□□□ 0.18
CPNE8-207ENST00000550863 NINLQ9Y2I6 1382 aa16.15■□□□□ 0.18
CPNE8-207ENST00000550863 LTV1Q96GA3 475 aaPredicted RBP16.15■□□□□ 0.18
CPNE8-207ENST00000550863 PCGF6Q9BYE7 350 aa16.15■□□□□ 0.18
CPNE8-207ENST00000550863 ANKRD26Q9UPS8 1709 aa16.15■□□□□ 0.18
CPNE8-207ENST00000550863 KCNQ2O43526 872 aa16.14■□□□□ 0.17
CPNE8-207ENST00000550863 ACSBG1Q96GR2 724 aa16.14■□□□□ 0.17
CPNE8-207ENST00000550863 MAP3K19Q56UN5 1328 aa16.14■□□□□ 0.17
CPNE8-207ENST00000550863 MEGF6O75095 1541 aa16.14■□□□□ 0.17
CPNE8-207ENST00000550863 BCL9O00512 1426 aa16.13■□□□□ 0.17
CPNE8-207ENST00000550863 PUS7Q96PZ0 661 aaKnown RBP16.12■□□□□ 0.17
CPNE8-207ENST00000550863 PDGFDQ9GZP0 370 aaPredicted RBP16.12■□□□□ 0.17
CPNE8-207ENST00000550863 GGNBP2Q9H3C7 697 aa16.12■□□□□ 0.17
CPNE8-207ENST00000550863 MAP2P11137 1827 aaKnown RBP16.12■□□□□ 0.17
CPNE8-207ENST00000550863 RRS1Q15050 365 aaKnown RBP16.11■□□□□ 0.17
CPNE8-207ENST00000550863 PROM2Q8N271 834 aa16.11■□□□□ 0.17
CPNE8-207ENST00000550863 CDCA7Q9BWT1 371 aaPredicted RBP16.11■□□□□ 0.17
CPNE8-207ENST00000550863 TOGARAM1Q9Y4F4 1720 aa16.11■□□□□ 0.17
CPNE8-207ENST00000550863 EXOC5O00471 708 aa16.1■□□□□ 0.17
CPNE8-207ENST00000550863 IL2RBP14784 551 aa16.1■□□□□ 0.17
CPNE8-207ENST00000550863 TMF1P82094 1093 aa16.1■□□□□ 0.17
CPNE8-207ENST00000550863 COG3Q96JB2 828 aa16.1■□□□□ 0.17
CPNE8-207ENST00000550863 BCL11BQ9C0K0 894 aaPredicted RBP16.1■□□□□ 0.17
CPNE8-207ENST00000550863 NSD3Q9BZ95 1437 aa16.1■□□□□ 0.17
CPNE8-207ENST00000550863 LY75O60449 1722 aa16.09■□□□□ 0.17
CPNE8-207ENST00000550863 HOXC9P31274 260 aa16.09■□□□□ 0.17
CPNE8-207ENST00000550863 IP6K1Q92551 441 aa16.09■□□□□ 0.17
CPNE8-207ENST00000550863 USHBP1Q8N6Y0 703 aa16.08■□□□□ 0.16
CPNE8-207ENST00000550863 FYB1O15117 783 aa16.07■□□□□ 0.16
CPNE8-207ENST00000550863 PLSCR1O15162 318 aa16.07■□□□□ 0.16
CPNE8-207ENST00000550863 PKD1L3Q7Z443 1732 aa16.07■□□□□ 0.16
CPNE8-207ENST00000550863 ITGB4P16144 1822 aa16.06■□□□□ 0.16
CPNE8-207ENST00000550863 RTL1A6NKG5 1358 aa16.06■□□□□ 0.16
CPNE8-207ENST00000550863 NBPF14Q5TI25 921 aa16.06■□□□□ 0.16
CPNE8-207ENST00000550863 CARD14Q9BXL6 1004 aa16.06■□□□□ 0.16
CPNE8-207ENST00000550863 QSER1Q2KHR3 1735 aa16.05■□□□□ 0.16
CPNE8-207ENST00000550863 AMPHP49418 695 aa16.05■□□□□ 0.16
CPNE8-207ENST00000550863 TXNRD1Q16881 649 aa16.05■□□□□ 0.16
CPNE8-207ENST00000550863 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
CPNE8-207ENST00000550863 NSD2O96028 1365 aa16.03■□□□□ 0.16
CPNE8-207ENST00000550863 DDX54Q8TDD1 881 aaKnown RBP16.02■□□□□ 0.16
CPNE8-207ENST00000550863 EMILIN1Q9Y6C2 1016 aa16.02■□□□□ 0.16
CPNE8-207ENST00000550863 TAF1LQ8IZX4 1826 aa16.02■□□□□ 0.16
CPNE8-207ENST00000550863 C5P01031 1676 aa16.02■□□□□ 0.15
CPNE8-207ENST00000550863 ZBTB7AO95365 584 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms