RNA–Protein interactions for RNA: ENST00000550718.1

GNPTAB-208, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-208ENST00000550718 CCDC116Q8IYX3 515 aa11.77□□□□□ -0.53
GNPTAB-208ENST00000550718 SLC10A4Q96EP9 437 aa11.77□□□□□ -0.53
GNPTAB-208ENST00000550718 ZFAND3Q9H8U3 227 aa11.77□□□□□ -0.53
GNPTAB-208ENST00000550718 HMX1Q9NP08 348 aaPredicted RBP11.77□□□□□ -0.53
GNPTAB-208ENST00000550718 MEIOBQ8N635 442 aa11.75□□□□□ -0.53
GNPTAB-208ENST00000550718 OCSTAMPQ9BR26 566 aa11.75□□□□□ -0.53
GNPTAB-208ENST00000550718 NXF1Q9UBU9 619 aaKnown RBP11.75□□□□□ -0.53
GNPTAB-208ENST00000550718 SOCS7O14512 581 aa11.74□□□□□ -0.53
GNPTAB-208ENST00000550718 EPS8L1Q8TE68 723 aa11.74□□□□□ -0.53
GNPTAB-208ENST00000550718 WIPF1O43516 503 aa11.73□□□□□ -0.53
GNPTAB-208ENST00000550718 UPP2O95045 317 aa11.73□□□□□ -0.53
GNPTAB-208ENST00000550718 PURBQ96QR8 312 aaKnown RBP11.73□□□□□ -0.53
GNPTAB-208ENST00000550718 KCTD15Q96SI1 283 aaPredicted RBP11.73□□□□□ -0.53
GNPTAB-208ENST00000550718 DHX9Q08211 1270 aaKnown RBP11.72□□□□□ -0.53
GNPTAB-208ENST00000550718 TPRNQ4KMQ1 711 aa11.72□□□□□ -0.53
GNPTAB-208ENST00000550718 ADAM32Q8TC27 787 aa11.72□□□□□ -0.53
GNPTAB-208ENST00000550718 TRIM34Q9BYJ4 488 aa11.72□□□□□ -0.53
GNPTAB-208ENST00000550718 NBPF20Q3BBV1 942 aa11.71□□□□□ -0.53
GNPTAB-208ENST00000550718 LINC00528Q8N1L1 170 aa11.71□□□□□ -0.53
GNPTAB-208ENST00000550718 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.53
GNPTAB-208ENST00000550718 TSEN34Q9BSV6 310 aaKnown RBP11.71□□□□□ -0.53
GNPTAB-208ENST00000550718 PGPEP1Q9NXJ5 209 aa11.71□□□□□ -0.53
GNPTAB-208ENST00000550718 BANK1Q8NDB2 785 aa11.7□□□□□ -0.54
GNPTAB-208ENST00000550718 PPP1R26Q5T8A7 1209 aaPredicted RBP11.69□□□□□ -0.54
GNPTAB-208ENST00000550718 Q6ZVU0 165 aa11.69□□□□□ -0.54
GNPTAB-208ENST00000550718 GJD4Q96KN9 370 aaPredicted RBP11.67□□□□□ -0.54
GNPTAB-208ENST00000550718 H3BM21 787 aa11.66□□□□□ -0.54
GNPTAB-208ENST00000550718 BMP2P12643 396 aa11.66□□□□□ -0.54
GNPTAB-208ENST00000550718 INTS6LQ5JSJ4 861 aaKnown RBP11.66□□□□□ -0.54
GNPTAB-208ENST00000550718 LCE2CQ5TA81 110 aa11.65□□□□□ -0.54
GNPTAB-208ENST00000550718 SOS2Q07890 1332 aaPredicted RBP11.64□□□□□ -0.55
GNPTAB-208ENST00000550718 C6orf118Q5T5N4 469 aa11.64□□□□□ -0.55
GNPTAB-208ENST00000550718 SEPT12Q8IYM1 358 aa11.64□□□□□ -0.55
GNPTAB-208ENST00000550718 IRF7Q92985 503 aa11.64□□□□□ -0.55
GNPTAB-208ENST00000550718 TRIM52Q96A61 297 aa11.64□□□□□ -0.55
GNPTAB-208ENST00000550718 ESPNB1AK53 854 aa11.63□□□□□ -0.55
GNPTAB-208ENST00000550718 MAN1A2O60476 641 aa11.63□□□□□ -0.55
GNPTAB-208ENST00000550718 DZIP3Q86Y13 1208 aaKnown RBP11.63□□□□□ -0.55
GNPTAB-208ENST00000550718 ZBBXA8MT70 800 aa11.62□□□□□ -0.55
GNPTAB-208ENST00000550718 INSM1Q01101 510 aaPredicted RBP11.62□□□□□ -0.55
GNPTAB-208ENST00000550718 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
GNPTAB-208ENST00000550718 APBB1O00213 710 aa11.61□□□□□ -0.55
GNPTAB-208ENST00000550718 SPINT1O43278 529 aa11.6□□□□□ -0.55
GNPTAB-208ENST00000550718 ZNF592Q92610 1267 aa11.6□□□□□ -0.55
GNPTAB-208ENST00000550718 MCCD1P59942 119 aaPredicted RBP11.59□□□□□ -0.55
GNPTAB-208ENST00000550718 VSIG8P0DPA2 414 aa11.58□□□□□ -0.56
GNPTAB-208ENST00000550718 CBLBQ13191 982 aa11.58□□□□□ -0.56
GNPTAB-208ENST00000550718 TTLL8A6PVC2 850 aa11.57□□□□□ -0.56
GNPTAB-208ENST00000550718 SOBPA7XYQ1 873 aa11.57□□□□□ -0.56
GNPTAB-208ENST00000550718 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.57□□□□□ -0.56
GNPTAB-208ENST00000550718 DNMT3LQ9UJW3 386 aa11.57□□□□□ -0.56
GNPTAB-208ENST00000550718 FBXO45P0C2W1 286 aa11.56□□□□□ -0.56
GNPTAB-208ENST00000550718 MTMR14Q8NCE2 650 aa11.56□□□□□ -0.56
GNPTAB-208ENST00000550718 ERVH48-1M5A8F1 160 aa11.55□□□□□ -0.56
GNPTAB-208ENST00000550718 ZNF784Q8NCA9 323 aaPredicted RBP11.55□□□□□ -0.56
GNPTAB-208ENST00000550718 STK17AQ9UEE5 414 aa11.55□□□□□ -0.56
GNPTAB-208ENST00000550718 NDUFB9Q9Y6M9 179 aa11.55□□□□□ -0.56
GNPTAB-208ENST00000550718 LILRA1O75019 489 aa11.54□□□□□ -0.56
GNPTAB-208ENST00000550718 VEGFBP49765 207 aa11.53□□□□□ -0.56
GNPTAB-208ENST00000550718 NR1H3Q13133 447 aa11.53□□□□□ -0.56
GNPTAB-208ENST00000550718 ZNF330Q9Y3S2 320 aaPredicted RBP11.53□□□□□ -0.56
GNPTAB-208ENST00000550718 GPR37L1O60883 481 aa11.52□□□□□ -0.57
GNPTAB-208ENST00000550718 ADH1AP07327 375 aa11.52□□□□□ -0.57
GNPTAB-208ENST00000550718 GMPRP36959 345 aa11.52□□□□□ -0.57
GNPTAB-208ENST00000550718 TMPRSS4Q9NRS4 437 aa11.52□□□□□ -0.57
GNPTAB-208ENST00000550718 ERBB4Q15303 1308 aa11.52□□□□□ -0.57
GNPTAB-208ENST00000550718 PPFIA3O75145 1194 aa11.51□□□□□ -0.57
GNPTAB-208ENST00000550718 RNF20Q5VTR2 975 aa11.51□□□□□ -0.57
GNPTAB-208ENST00000550718 PCDHB9Q9Y5E1 797 aa11.51□□□□□ -0.57
GNPTAB-208ENST00000550718 SNRKQ9NRH2 765 aa11.49□□□□□ -0.57
GNPTAB-208ENST00000550718 GIGYF1O75420 1035 aaPredicted RBP11.48□□□□□ -0.57
GNPTAB-208ENST00000550718 ADD1P35611 737 aaKnown RBP11.48□□□□□ -0.57
GNPTAB-208ENST00000550718 RAB15P59190 212 aa11.48□□□□□ -0.57
GNPTAB-208ENST00000550718 RELBQ01201 579 aa11.48□□□□□ -0.57
GNPTAB-208ENST00000550718 AGBL1Q96MI9 1066 aa11.48□□□□□ -0.57
GNPTAB-208ENST00000550718 PTGIRP43119 386 aa11.47□□□□□ -0.57
GNPTAB-208ENST00000550718 PTSQ03393 145 aa11.47□□□□□ -0.57
GNPTAB-208ENST00000550718 KDF1Q8NAX2 398 aaPredicted RBP11.47□□□□□ -0.57
GNPTAB-208ENST00000550718 CTSOP43234 321 aaPredicted RBP11.46□□□□□ -0.57
GNPTAB-208ENST00000550718 INSM2Q96T92 566 aaPredicted RBP11.46□□□□□ -0.57
GNPTAB-208ENST00000550718 PRM3Q9NNZ6 103 aa11.46□□□□□ -0.57
GNPTAB-208ENST00000550718 ERVK-9P63128 1117 aa11.44□□□□□ -0.58
GNPTAB-208ENST00000550718 RNF217Q8TC41 542 aa11.44□□□□□ -0.58
GNPTAB-208ENST00000550718 NANOS1Q8WY41 292 aaKnown RBP11.44□□□□□ -0.58
GNPTAB-208ENST00000550718 FAM181BA6NEQ2 426 aa11.43□□□□□ -0.58
GNPTAB-208ENST00000550718 FIGNL2A6NMB9 653 aa11.43□□□□□ -0.58
GNPTAB-208ENST00000550718 LORP23490 312 aaPredicted RBP11.43□□□□□ -0.58
GNPTAB-208ENST00000550718 ZNF395Q9H8N7 513 aaPredicted RBP11.43□□□□□ -0.58
GNPTAB-208ENST00000550718 POLMQ9NP87 494 aaPredicted RBP11.43□□□□□ -0.58
GNPTAB-208ENST00000550718 CYLDQ9NQC7 956 aa11.43□□□□□ -0.58
GNPTAB-208ENST00000550718 SLC35F4A4IF30 521 aa11.42□□□□□ -0.58
GNPTAB-208ENST00000550718 ZSCAN1Q8NBB4 408 aa11.42□□□□□ -0.58
GNPTAB-208ENST00000550718 CC2D2BQ6DHV5 1058 aa11.41□□□□□ -0.58
GNPTAB-208ENST00000550718 CCDC155Q8N6L0 562 aa11.41□□□□□ -0.58
GNPTAB-208ENST00000550718 ATP5J2-PTCD1G3V325 749 aa11.4□□□□□ -0.58
GNPTAB-208ENST00000550718 GPC1P35052 558 aa11.4□□□□□ -0.58
GNPTAB-208ENST00000550718 RNF144AP50876 292 aaPredicted RBP11.4□□□□□ -0.58
GNPTAB-208ENST00000550718 FOXD4L5Q5VV16 416 aaPredicted RBP11.39□□□□□ -0.59
GNPTAB-208ENST00000550718 CYP2U1Q7Z449 544 aa11.37□□□□□ -0.59
GNPTAB-208ENST00000550718 CEP126Q9P2H0 1117 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms