RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.98■□□□□ 0.63
NUP188-211ENST00000550219 NFAT5O94916 1531 aa18.98■□□□□ 0.63
NUP188-211ENST00000550219 KCNH5Q8NCM2 988 aa18.97■□□□□ 0.63
NUP188-211ENST00000550219 TMC1Q8TDI8 760 aa18.97■□□□□ 0.63
NUP188-211ENST00000550219 RREB1Q92766 1687 aa18.97■□□□□ 0.63
NUP188-211ENST00000550219 OVOS2A0A0G2JMS6 1433 aa18.97■□□□□ 0.63
NUP188-211ENST00000550219 OVOS2A0A0J9YW53 1432 aa18.97■□□□□ 0.63
NUP188-211ENST00000550219 OVOS2Q6IE36 1432 aa18.97■□□□□ 0.63
NUP188-211ENST00000550219 SRCAPQ6ZRS2 3230 aa18.96■□□□□ 0.63
NUP188-211ENST00000550219 RGPD5Q99666 1765 aa18.96■□□□□ 0.63
NUP188-211ENST00000550219 CSB-PGBD3P0DP91 1061 aa18.96■□□□□ 0.63
NUP188-211ENST00000550219 CAMKK2Q96RR4 588 aa18.96■□□□□ 0.63
NUP188-211ENST00000550219 TIMELESSQ9UNS1 1208 aa18.96■□□□□ 0.63
NUP188-211ENST00000550219 AXIN2Q9Y2T1 843 aa18.96■□□□□ 0.63
NUP188-211ENST00000550219 NUP188Q5SRE5 1749 aa18.96■□□□□ 0.63
NUP188-211ENST00000550219 WDR17Q8IZU2 1322 aa18.96■□□□□ 0.63
NUP188-211ENST00000550219 ARHGEF25Q86VW2 580 aa18.95■□□□□ 0.62
NUP188-211ENST00000550219 CD163L1Q9NR16 1453 aa18.95■□□□□ 0.62
NUP188-211ENST00000550219 PARD3Q8TEW0 1356 aa18.94■□□□□ 0.62
NUP188-211ENST00000550219 PEAK1Q9H792 1746 aa18.94■□□□□ 0.62
NUP188-211ENST00000550219 DDB1Q16531 1140 aa18.93■□□□□ 0.62
NUP188-211ENST00000550219 NME9Q86XW9 330 aa18.93■□□□□ 0.62
NUP188-211ENST00000550219 USP54Q70EL1 1684 aa18.92■□□□□ 0.62
NUP188-211ENST00000550219 HDGFL2Q7Z4V5 671 aaPredicted RBP18.92■□□□□ 0.62
NUP188-211ENST00000550219 ABCC6O95255 1503 aa18.91■□□□□ 0.62
NUP188-211ENST00000550219 SLC12A5Q9H2X9 1139 aa18.9■□□□□ 0.62
NUP188-211ENST00000550219 LTN1O94822 1766 aa18.9■□□□□ 0.62
NUP188-211ENST00000550219 A0A1W2PP64 1363 aa18.9■□□□□ 0.62
NUP188-211ENST00000550219 USP31Q70CQ4 1352 aa18.89■□□□□ 0.61
NUP188-211ENST00000550219 EDC4Q6P2E9 1401 aaKnown RBP18.89■□□□□ 0.61
NUP188-211ENST00000550219 C11orf95C9JLR9 678 aaPredicted RBP18.87■□□□□ 0.61
NUP188-211ENST00000550219 SBF2Q86WG5 1849 aa18.87■□□□□ 0.61
NUP188-211ENST00000550219 CCDC7Q96M83 1385 aa18.87■□□□□ 0.61
NUP188-211ENST00000550219 CARD10Q9BWT7 1032 aa18.87■□□□□ 0.61
NUP188-211ENST00000550219 TERF2IPQ9NYB0 399 aa18.87■□□□□ 0.61
NUP188-211ENST00000550219 NBPF14Q5TI25 921 aa18.86■□□□□ 0.61
NUP188-211ENST00000550219 CDCA7Q9BWT1 371 aaPredicted RBP18.86■□□□□ 0.61
NUP188-211ENST00000550219 TNS2Q63HR2 1409 aa18.85■□□□□ 0.61
NUP188-211ENST00000550219 MARCH10Q8NA82 808 aaPredicted RBP18.85■□□□□ 0.61
NUP188-211ENST00000550219 RGPD3A6NKT7 1758 aaPredicted RBP18.85■□□□□ 0.61
NUP188-211ENST00000550219 RGPD4Q7Z3J3 1758 aa18.85■□□□□ 0.61
NUP188-211ENST00000550219 ST20-MTHFSA0A0A6YYL1 179 aa18.84■□□□□ 0.61
NUP188-211ENST00000550219 PTF1AQ7RTS3 328 aa18.84■□□□□ 0.61
NUP188-211ENST00000550219 ERBB3P21860 1342 aa18.83■□□□□ 0.61
NUP188-211ENST00000550219 ZEB1P37275 1124 aaPredicted RBP18.83■□□□□ 0.6
NUP188-211ENST00000550219 NLRP2Q9NX02 1062 aa18.83■□□□□ 0.6
NUP188-211ENST00000550219 TESK2Q96S53 571 aa18.82■□□□□ 0.6
NUP188-211ENST00000550219 EXOC5O00471 708 aa18.81■□□□□ 0.6
NUP188-211ENST00000550219 ANKRD24Q8TF21 1146 aa18.81■□□□□ 0.6
NUP188-211ENST00000550219 BCL11BQ9C0K0 894 aaPredicted RBP18.81■□□□□ 0.6
NUP188-211ENST00000550219 NINLQ9Y2I6 1382 aa18.81■□□□□ 0.6
NUP188-211ENST00000550219 USP47Q96K76 1375 aa18.8■□□□□ 0.6
NUP188-211ENST00000550219 PUS7Q96PZ0 661 aaKnown RBP18.79■□□□□ 0.6
NUP188-211ENST00000550219 BCL9O00512 1426 aa18.78■□□□□ 0.6
NUP188-211ENST00000550219 ANO8Q9HCE9 1232 aaPredicted RBP18.78■□□□□ 0.6
NUP188-211ENST00000550219 NHSQ6T4R5 1651 aa18.78■□□□□ 0.6
NUP188-211ENST00000550219 PLSCR1O15162 318 aa18.77■□□□□ 0.6
NUP188-211ENST00000550219 IL2RBP14784 551 aa18.77■□□□□ 0.6
NUP188-211ENST00000550219 LTV1Q96GA3 475 aaPredicted RBP18.77■□□□□ 0.6
NUP188-211ENST00000550219 FAM208AQ9UK61 1670 aaKnown RBP18.76■□□□□ 0.59
NUP188-211ENST00000550219 ACSBG1Q96GR2 724 aa18.76■□□□□ 0.59
NUP188-211ENST00000550219 COG3Q96JB2 828 aa18.76■□□□□ 0.59
NUP188-211ENST00000550219 ANKRD36BQ8N2N9 1353 aa18.76■□□□□ 0.59
NUP188-211ENST00000550219 KCNQ2O43526 872 aa18.74■□□□□ 0.59
NUP188-211ENST00000550219 TMF1P82094 1093 aa18.74■□□□□ 0.59
NUP188-211ENST00000550219 PPP1R1BQ9UD71 204 aaPredicted RBP18.74■□□□□ 0.59
NUP188-211ENST00000550219 CASZ1Q86V15 1759 aa18.73■□□□□ 0.59
NUP188-211ENST00000550219 MAP3K19Q56UN5 1328 aa18.73■□□□□ 0.59
NUP188-211ENST00000550219 SLC24A1O60721 1099 aa18.72■□□□□ 0.59
NUP188-211ENST00000550219 FBLN1P23142 703 aa18.72■□□□□ 0.59
NUP188-211ENST00000550219 TXNRD1Q16881 649 aa18.72■□□□□ 0.59
NUP188-211ENST00000550219 IP6K1Q92551 441 aa18.72■□□□□ 0.59
NUP188-211ENST00000550219 SPON1Q9HCB6 807 aa18.72■□□□□ 0.59
NUP188-211ENST00000550219 AMPHP49418 695 aa18.71■□□□□ 0.59
NUP188-211ENST00000550219 PROM2Q8N271 834 aa18.7■□□□□ 0.58
NUP188-211ENST00000550219 BTAF1O14981 1849 aa18.7■□□□□ 0.58
NUP188-211ENST00000550219 KIF20BQ96Q89 1820 aa18.7■□□□□ 0.58
NUP188-211ENST00000550219 HOXC9P31274 260 aa18.69■□□□□ 0.58
NUP188-211ENST00000550219 GGNBP2Q9H3C7 697 aa18.69■□□□□ 0.58
NUP188-211ENST00000550219 STK32BQ9NY57 414 aa18.69■□□□□ 0.58
NUP188-211ENST00000550219 PDGFDQ9GZP0 370 aaPredicted RBP18.68■□□□□ 0.58
NUP188-211ENST00000550219 MYOM1P52179 1685 aa18.68■□□□□ 0.58
NUP188-211ENST00000550219 RGPD2P0DJD1 1756 aa18.68■□□□□ 0.58
NUP188-211ENST00000550219 ZBTB7AO95365 584 aa18.67■□□□□ 0.58
NUP188-211ENST00000550219 RRS1Q15050 365 aaKnown RBP18.67■□□□□ 0.58
NUP188-211ENST00000550219 DDX54Q8TDD1 881 aaKnown RBP18.67■□□□□ 0.58
NUP188-211ENST00000550219 RTL1A6NKG5 1358 aa18.67■□□□□ 0.58
NUP188-211ENST00000550219 DOT1LQ8TEK3 1739 aa18.66■□□□□ 0.58
NUP188-211ENST00000550219 MEGF6O75095 1541 aa18.65■□□□□ 0.58
NUP188-211ENST00000550219 SMG6Q86US8 1419 aaKnown RBP18.65■□□□□ 0.58
NUP188-211ENST00000550219 PAPPAQ13219 1627 aa18.64■□□□□ 0.57
NUP188-211ENST00000550219 FYB1O15117 783 aa18.64■□□□□ 0.57
NUP188-211ENST00000550219 SLC15A2Q16348 729 aa18.64■□□□□ 0.57
NUP188-211ENST00000550219 CDCA8Q53HL2 280 aa18.64■□□□□ 0.57
NUP188-211ENST00000550219 SHANK3Q9BYB0 1731 aa18.63■□□□□ 0.57
NUP188-211ENST00000550219 USHBP1Q8N6Y0 703 aa18.63■□□□□ 0.57
NUP188-211ENST00000550219 SYTL4Q96C24 671 aaPredicted RBP18.63■□□□□ 0.57
NUP188-211ENST00000550219 NSD3Q9BZ95 1437 aa18.63■□□□□ 0.57
NUP188-211ENST00000550219 ATF5Q9Y2D1 282 aaPredicted RBP18.62■□□□□ 0.57
NUP188-211ENST00000550219 POLR3GLQ9BT43 218 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms