RNA–Protein interactions for RNA: ENST00000550103.2

EFCAB11-203, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-203ENST00000550103 BRD1O95696 1058 aa10.08□□□□□ -0.8
EFCAB11-203ENST00000550103 KCNA1Q09470 495 aa10.08□□□□□ -0.8
EFCAB11-203ENST00000550103 PROX2Q3B8N5 592 aa10.08□□□□□ -0.8
EFCAB11-203ENST00000550103 MAMSTRQ6ZN01 415 aa10.08□□□□□ -0.8
EFCAB11-203ENST00000550103 PPP1R12CQ9BZL4 782 aa10.08□□□□□ -0.8
EFCAB11-203ENST00000550103 HMX1Q9NP08 348 aaPredicted RBP10.08□□□□□ -0.8
EFCAB11-203ENST00000550103 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
EFCAB11-203ENST00000550103 CCNB3Q8WWL7 1395 aa10.08□□□□□ -0.8
EFCAB11-203ENST00000550103 SCAPERQ9BY12 1400 aa10.07□□□□□ -0.8
EFCAB11-203ENST00000550103 ADAMTSL3P82987 1691 aa10.07□□□□□ -0.8
EFCAB11-203ENST00000550103 CAMSAP2Q08AD1 1489 aa10.07□□□□□ -0.8
EFCAB11-203ENST00000550103 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.07□□□□□ -0.8
EFCAB11-203ENST00000550103 SLC10A3P09131 477 aa10.07□□□□□ -0.8
EFCAB11-203ENST00000550103 CFAP70Q5T0N1 1121 aa10.07□□□□□ -0.8
EFCAB11-203ENST00000550103 ALG2Q9H553 416 aa10.07□□□□□ -0.8
EFCAB11-203ENST00000550103 SCUBE2Q9NQ36 999 aa10.07□□□□□ -0.8
EFCAB11-203ENST00000550103 PTPN23Q9H3S7 1636 aa10.07□□□□□ -0.8
EFCAB11-203ENST00000550103 HOXB1P14653 301 aaPredicted RBP10.06□□□□□ -0.8
EFCAB11-203ENST00000550103 SRPK2P78362 688 aaKnown RBP10.06□□□□□ -0.8
EFCAB11-203ENST00000550103 SWT1Q5T5J6 900 aaKnown RBP10.06□□□□□ -0.8
EFCAB11-203ENST00000550103 KCNK17Q96T54 332 aa10.06□□□□□ -0.8
EFCAB11-203ENST00000550103 ATP7AQ04656 1500 aa10.06□□□□□ -0.8
EFCAB11-203ENST00000550103 ARHGEF12Q9NZN5 1544 aa10.06□□□□□ -0.8
EFCAB11-203ENST00000550103 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.05□□□□□ -0.8
EFCAB11-203ENST00000550103 RFX1P22670 979 aa10.05□□□□□ -0.8
EFCAB11-203ENST00000550103 VAC14Q08AM6 782 aa10.05□□□□□ -0.8
EFCAB11-203ENST00000550103 RGS22Q8NE09 1264 aa10.05□□□□□ -0.8
EFCAB11-203ENST00000550103 ZBED2Q9BTP6 218 aa10.05□□□□□ -0.8
EFCAB11-203ENST00000550103 PLEKHH2Q8IVE3 1493 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 GPR37L1O60883 481 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 RAPGEF3O95398 923 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 POTEJP0CG39 1038 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 MFAP1P55081 439 aaKnown RBP10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 GUCA2AQ02747 115 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 PNMA1Q8ND90 353 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 TSC1Q92574 1164 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 RABGEF1Q9UJ41 708 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 MYOM3Q5VTT5 1437 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 YEATS2Q9ULM3 1422 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 ARHGEF5Q12774 1597 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 REREQ9P2R6 1566 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 MAGI2Q86UL8 1455 aa10.04□□□□□ -0.8
EFCAB11-203ENST00000550103 PALM3A6NDB9 673 aaPredicted RBP10.03□□□□□ -0.8
EFCAB11-203ENST00000550103 C6orf229H3BNL8 230 aa10.03□□□□□ -0.8
EFCAB11-203ENST00000550103 EFCAB2Q5VUJ9 269 aa10.03□□□□□ -0.8
EFCAB11-203ENST00000550103 SLF2Q8IX21 1173 aa10.03□□□□□ -0.8
EFCAB11-203ENST00000550103 LRRN4Q8WUT4 740 aa10.03□□□□□ -0.8
EFCAB11-203ENST00000550103 DNMT1P26358 1616 aaKnown RBP10.03□□□□□ -0.8
EFCAB11-203ENST00000550103 FGD6Q6ZV73 1430 aa10.02□□□□□ -0.81
EFCAB11-203ENST00000550103 MIA2Q96PC5 1412 aa10.02□□□□□ -0.81
EFCAB11-203ENST00000550103 TRAPPC8Q9Y2L5 1435 aa10.02□□□□□ -0.81
EFCAB11-203ENST00000550103 CFAP99D6REC4 459 aa10.02□□□□□ -0.81
EFCAB11-203ENST00000550103 ZEB1P37275 1124 aaPredicted RBP10.02□□□□□ -0.81
EFCAB11-203ENST00000550103 SLC4A5Q9BY07 1137 aa10.02□□□□□ -0.81
EFCAB11-203ENST00000550103 C9orf84Q5VXU9 1444 aa10.01□□□□□ -0.81
EFCAB11-203ENST00000550103 ATP6V1AP38606 617 aa10.01□□□□□ -0.81
EFCAB11-203ENST00000550103 SP7Q8TDD2 431 aaPredicted RBP10.01□□□□□ -0.81
EFCAB11-203ENST00000550103 HLA-CQ95604 372 aa10.01□□□□□ -0.81
EFCAB11-203ENST00000550103 CLTCQ00610 1675 aaKnown RBP10.01□□□□□ -0.81
EFCAB11-203ENST00000550103 PLXNC1O60486 1568 aa10.01□□□□□ -0.81
EFCAB11-203ENST00000550103 CCDC141Q6ZP82 1450 aa10□□□□□ -0.81
EFCAB11-203ENST00000550103 LMOD1P29536 600 aaPredicted RBP10□□□□□ -0.81
EFCAB11-203ENST00000550103 SEMA3FQ13275 785 aa10□□□□□ -0.81
EFCAB11-203ENST00000550103 MAST1Q9Y2H9 1570 aa10□□□□□ -0.81
EFCAB11-203ENST00000550103 C3P01024 1663 aa9.99□□□□□ -0.81
EFCAB11-203ENST00000550103 MLH3Q9UHC1 1453 aa9.99□□□□□ -0.81
EFCAB11-203ENST00000550103 FUT2Q10981 343 aa9.99□□□□□ -0.81
EFCAB11-203ENST00000550103 FAM98CQ17RN3 349 aaKnown RBP9.99□□□□□ -0.81
EFCAB11-203ENST00000550103 TFIP11Q9UBB9 837 aaKnown RBP9.99□□□□□ -0.81
EFCAB11-203ENST00000550103 MYT1LQ9UL68 1186 aa9.99□□□□□ -0.81
EFCAB11-203ENST00000550103 MTMR7Q9Y216 660 aa9.99□□□□□ -0.81
EFCAB11-203ENST00000550103 MROH2AA6NES4 1674 aa9.99□□□□□ -0.81
EFCAB11-203ENST00000550103 CEP152O94986 1710 aa9.99□□□□□ -0.81
EFCAB11-203ENST00000550103 ATG7O95352 703 aa9.98□□□□□ -0.81
EFCAB11-203ENST00000550103 EIF4G2P78344 907 aaKnown RBP eCLIP9.98□□□□□ -0.81
EFCAB11-203ENST00000550103 CFDP1Q9UEE9 299 aaPredicted RBP9.98□□□□□ -0.81
EFCAB11-203ENST00000550103 ATP10AO60312 1499 aa9.98□□□□□ -0.81
EFCAB11-203ENST00000550103 TCOF1Q13428 1488 aaKnown RBP9.98□□□□□ -0.81
EFCAB11-203ENST00000550103 EIF2AK4Q9P2K8 1649 aaKnown RBP9.97□□□□□ -0.81
EFCAB11-203ENST00000550103 DESI1Q6ICB0 168 aa9.97□□□□□ -0.81
EFCAB11-203ENST00000550103 PRR7Q8TB68 274 aa9.97□□□□□ -0.81
EFCAB11-203ENST00000550103 KIAA1107Q9UPP5 1409 aa9.97□□□□□ -0.81
EFCAB11-203ENST00000550103 PREX1Q8TCU6 1659 aa9.96□□□□□ -0.81
EFCAB11-203ENST00000550103 ARHGAP33O14559 1287 aa9.96□□□□□ -0.82
EFCAB11-203ENST00000550103 CFHP08603 1231 aa9.96□□□□□ -0.82
EFCAB11-203ENST00000550103 FAM50AQ14320 339 aaKnown RBP9.96□□□□□ -0.82
EFCAB11-203ENST00000550103 EPS8L1Q8TE68 723 aa9.96□□□□□ -0.82
EFCAB11-203ENST00000550103 UCN2Q96RP3 112 aa9.96□□□□□ -0.82
EFCAB11-203ENST00000550103 ZC3H13Q5T200 1668 aaKnown RBP9.96□□□□□ -0.82
EFCAB11-203ENST00000550103 NR6A1Q15406 480 aa9.95□□□□□ -0.82
EFCAB11-203ENST00000550103 KMT5BQ4FZB7 885 aa9.95□□□□□ -0.82
EFCAB11-203ENST00000550103 POTEHQ6S545 545 aa9.95□□□□□ -0.82
EFCAB11-203ENST00000550103 LAPTM4BQ86VI4 370 aa9.95□□□□□ -0.82
EFCAB11-203ENST00000550103 RETREG3Q86VR2 466 aa9.95□□□□□ -0.82
EFCAB11-203ENST00000550103 SEPT9Q9UHD8 586 aaPredicted RBP9.95□□□□□ -0.82
EFCAB11-203ENST00000550103 ARID4BQ4LE39 1312 aaPredicted RBP9.95□□□□□ -0.82
EFCAB11-203ENST00000550103 MBD5Q9P267 1494 aa9.95□□□□□ -0.82
EFCAB11-203ENST00000550103 RNF17Q9BXT8 1623 aaKnown RBP9.94□□□□□ -0.82
EFCAB11-203ENST00000550103 AGLP35573 1532 aa9.94□□□□□ -0.82
EFCAB11-203ENST00000550103 ZNF644Q9H582 1327 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms