RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 SOX12O15370 315 aa24.04■■□□□ 1.44
CHMP1A-208ENST00000550102 EIF4G2P78344 907 aaKnown RBP eCLIP24.04■■□□□ 1.44
CHMP1A-208ENST00000550102 ZRANB1Q9UGI0 708 aa24.03■■□□□ 1.44
CHMP1A-208ENST00000550102 CRB1P82279 1406 aa24.01■■□□□ 1.43
CHMP1A-208ENST00000550102 PARP4Q9UKK3 1724 aaKnown RBP24.01■■□□□ 1.43
CHMP1A-208ENST00000550102 ARHGEF25Q86VW2 580 aa24.01■■□□□ 1.43
CHMP1A-208ENST00000550102 HSPA5P11021 654 aaKnown RBP24■■□□□ 1.43
CHMP1A-208ENST00000550102 LARP1Q6PKG0 1096 aaKnown RBP24■■□□□ 1.43
CHMP1A-208ENST00000550102 KRT27Q7Z3Y8 459 aa23.99■■□□□ 1.43
CHMP1A-208ENST00000550102 USP35Q9P2H5 1018 aa23.97■■□□□ 1.43
CHMP1A-208ENST00000550102 FAM208AQ9UK61 1670 aaKnown RBP23.97■■□□□ 1.43
CHMP1A-208ENST00000550102 RGPD1P0DJD0 1748 aa23.96■■□□□ 1.43
CHMP1A-208ENST00000550102 LRRC37A3O60309 1634 aa23.95■■□□□ 1.43
CHMP1A-208ENST00000550102 WDR17Q8IZU2 1322 aa23.95■■□□□ 1.42
CHMP1A-208ENST00000550102 BARGINQ6ZT62 677 aa23.95■■□□□ 1.42
CHMP1A-208ENST00000550102 TCP11L2Q8N4U5 519 aa23.95■■□□□ 1.42
CHMP1A-208ENST00000550102 COG3Q96JB2 828 aa23.94■■□□□ 1.42
CHMP1A-208ENST00000550102 AXIN2Q9Y2T1 843 aa23.94■■□□□ 1.42
CHMP1A-208ENST00000550102 THRAP3Q9Y2W1 955 aaKnown RBP23.94■■□□□ 1.42
CHMP1A-208ENST00000550102 BLMP54132 1417 aaPredicted RBP23.93■■□□□ 1.42
CHMP1A-208ENST00000550102 NSD3Q9BZ95 1437 aa23.93■■□□□ 1.42
CHMP1A-208ENST00000550102 ANKRD26Q9UPS8 1709 aa23.93■■□□□ 1.42
CHMP1A-208ENST00000550102 CCDC125Q86Z20 511 aa23.92■■□□□ 1.42
CHMP1A-208ENST00000550102 TOM1L2Q6ZVM7 507 aa23.91■■□□□ 1.42
CHMP1A-208ENST00000550102 TNS1Q9HBL0 1735 aaKnown RBP23.9■■□□□ 1.42
CHMP1A-208ENST00000550102 POLR3GLQ9BT43 218 aa23.9■■□□□ 1.42
CHMP1A-208ENST00000550102 CSB-PGBD3P0DP91 1061 aa23.89■■□□□ 1.41
CHMP1A-208ENST00000550102 FYB1O15117 783 aa23.87■■□□□ 1.41
CHMP1A-208ENST00000550102 GGNBP2Q9H3C7 697 aa23.87■■□□□ 1.41
CHMP1A-208ENST00000550102 ERBB3P21860 1342 aa23.86■■□□□ 1.41
CHMP1A-208ENST00000550102 CARD14Q9BXL6 1004 aa23.86■■□□□ 1.41
CHMP1A-208ENST00000550102 CCDC7Q96M83 1385 aa23.86■■□□□ 1.41
CHMP1A-208ENST00000550102 CARD10Q9BWT7 1032 aa23.85■■□□□ 1.41
CHMP1A-208ENST00000550102 RTL1A6NKG5 1358 aa23.85■■□□□ 1.41
CHMP1A-208ENST00000550102 PEAK1Q9H792 1746 aa23.84■■□□□ 1.41
CHMP1A-208ENST00000550102 MAP3K19Q56UN5 1328 aa23.84■■□□□ 1.41
CHMP1A-208ENST00000550102 SF3B2Q13435 895 aaKnown RBP23.83■■□□□ 1.41
CHMP1A-208ENST00000550102 DISP2A7MBM2 1401 aa23.83■■□□□ 1.4
CHMP1A-208ENST00000550102 RGPD2P0DJD1 1756 aa23.83■■□□□ 1.4
CHMP1A-208ENST00000550102 CGNL1Q0VF96 1302 aa23.83■■□□□ 1.4
CHMP1A-208ENST00000550102 PDE3BQ13370 1112 aa23.82■■□□□ 1.4
CHMP1A-208ENST00000550102 FAM182BQ5T319 152 aa23.82■■□□□ 1.4
CHMP1A-208ENST00000550102 ANKRD24Q8TF21 1146 aa23.81■■□□□ 1.4
CHMP1A-208ENST00000550102 IP6K1Q92551 441 aa23.81■■□□□ 1.4
CHMP1A-208ENST00000550102 CDCA7Q9BWT1 371 aaPredicted RBP23.81■■□□□ 1.4
CHMP1A-208ENST00000550102 SBF2Q86WG5 1849 aa23.81■■□□□ 1.4
CHMP1A-208ENST00000550102 MAP2P11137 1827 aaKnown RBP23.8■■□□□ 1.4
CHMP1A-208ENST00000550102 OVOS2A0A0G2JMS6 1433 aa23.79■■□□□ 1.4
CHMP1A-208ENST00000550102 FAM196AQ6ZSG2 479 aa23.79■■□□□ 1.4
CHMP1A-208ENST00000550102 NLRP2Q9NX02 1062 aa23.79■■□□□ 1.4
CHMP1A-208ENST00000550102 TNS2Q63HR2 1409 aa23.78■■□□□ 1.4
CHMP1A-208ENST00000550102 AMPHP49418 695 aa23.78■■□□□ 1.4
CHMP1A-208ENST00000550102 HOXC9P31274 260 aa23.77■■□□□ 1.4
CHMP1A-208ENST00000550102 DDB1Q16531 1140 aa23.77■■□□□ 1.4
CHMP1A-208ENST00000550102 C11orf95C9JLR9 678 aaPredicted RBP23.76■■□□□ 1.39
CHMP1A-208ENST00000550102 RRS1Q15050 365 aaKnown RBP23.76■■□□□ 1.39
CHMP1A-208ENST00000550102 KIF24Q5T7B8 1368 aa23.76■■□□□ 1.39
CHMP1A-208ENST00000550102 SMG6Q86US8 1419 aaKnown RBP23.76■■□□□ 1.39
CHMP1A-208ENST00000550102 FBLN1P23142 703 aa23.75■■□□□ 1.39
CHMP1A-208ENST00000550102 KIF7Q2M1P5 1343 aa23.75■■□□□ 1.39
CHMP1A-208ENST00000550102 PANK3Q9H999 370 aa23.74■■□□□ 1.39
CHMP1A-208ENST00000550102 FLT4P35916 1363 aa23.74■■□□□ 1.39
CHMP1A-208ENST00000550102 BAG6P46379 1132 aa23.73■■□□□ 1.39
CHMP1A-208ENST00000550102 LTV1Q96GA3 475 aaPredicted RBP23.73■■□□□ 1.39
CHMP1A-208ENST00000550102 NSD2O96028 1365 aa23.73■■□□□ 1.39
CHMP1A-208ENST00000550102 DEFB132Q7Z7B7 95 aa23.72■■□□□ 1.39
CHMP1A-208ENST00000550102 RGPD3A6NKT7 1758 aaPredicted RBP23.71■■□□□ 1.39
CHMP1A-208ENST00000550102 RGPD4Q7Z3J3 1758 aa23.71■■□□□ 1.39
CHMP1A-208ENST00000550102 INSRP06213 1382 aa23.7■■□□□ 1.38
CHMP1A-208ENST00000550102 TRIM37O94972 964 aa23.7■■□□□ 1.38
CHMP1A-208ENST00000550102 RREB1Q92766 1687 aa23.7■■□□□ 1.38
CHMP1A-208ENST00000550102 IL2RBP14784 551 aa23.69■■□□□ 1.38
CHMP1A-208ENST00000550102 BCL9O00512 1426 aa23.68■■□□□ 1.38
CHMP1A-208ENST00000550102 SHANK3Q9BYB0 1731 aa23.68■■□□□ 1.38
CHMP1A-208ENST00000550102 NHSQ6T4R5 1651 aa23.68■■□□□ 1.38
CHMP1A-208ENST00000550102 EXOC5O00471 708 aa23.66■■□□□ 1.38
CHMP1A-208ENST00000550102 EMILIN1Q9Y6C2 1016 aa23.66■■□□□ 1.38
CHMP1A-208ENST00000550102 NUP188Q5SRE5 1749 aa23.65■■□□□ 1.38
CHMP1A-208ENST00000550102 MARCH10Q8NA82 808 aaPredicted RBP23.65■■□□□ 1.38
CHMP1A-208ENST00000550102 PARD3Q8TEW0 1356 aa23.65■■□□□ 1.38
CHMP1A-208ENST00000550102 KNSTRNQ9Y448 316 aa23.64■■□□□ 1.37
CHMP1A-208ENST00000550102 MEGF6O75095 1541 aa23.64■■□□□ 1.37
CHMP1A-208ENST00000550102 HSP90AB2PQ58FF8 381 aa23.63■■□□□ 1.37
CHMP1A-208ENST00000550102 EN1Q05925 392 aaPredicted RBP23.62■■□□□ 1.37
CHMP1A-208ENST00000550102 PPM1GO15355 546 aaPredicted RBP23.61■■□□□ 1.37
CHMP1A-208ENST00000550102 APBA3O96018 575 aa23.61■■□□□ 1.37
CHMP1A-208ENST00000550102 TNNT2P45379 298 aaPredicted RBP23.61■■□□□ 1.37
CHMP1A-208ENST00000550102 KAT6BQ8WYB5 2073 aa23.61■■□□□ 1.37
CHMP1A-208ENST00000550102 DOT1LQ8TEK3 1739 aa23.6■■□□□ 1.37
CHMP1A-208ENST00000550102 WASHC2AQ641Q2 1341 aa23.59■■□□□ 1.37
CHMP1A-208ENST00000550102 PKD1L3Q7Z443 1732 aa23.59■■□□□ 1.37
CHMP1A-208ENST00000550102 NBPF6Q5VWK0 638 aa23.59■■□□□ 1.37
CHMP1A-208ENST00000550102 NBPF4Q96M43 638 aa23.59■■□□□ 1.37
CHMP1A-208ENST00000550102 POLKQ9UBT6 870 aa23.59■■□□□ 1.37
CHMP1A-208ENST00000550102 BTAF1O14981 1849 aa23.59■■□□□ 1.37
CHMP1A-208ENST00000550102 NCAPD2Q15021 1401 aa23.59■■□□□ 1.37
CHMP1A-208ENST00000550102 MORC1Q86VD1 984 aa23.57■■□□□ 1.36
CHMP1A-208ENST00000550102 USHBP1Q8N6Y0 703 aa23.57■■□□□ 1.36
CHMP1A-208ENST00000550102 CAMKK2Q96RR4 588 aa23.56■■□□□ 1.36
CHMP1A-208ENST00000550102 BCL11BQ9C0K0 894 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms