RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 CRB1P82279 1406 aa22.56■■□□□ 1.2
COX6A1-203ENST00000550009 TTC21AQ8NDW8 1320 aa22.56■■□□□ 1.2
COX6A1-203ENST00000550009 PEAK1Q9H792 1746 aa22.55■■□□□ 1.2
COX6A1-203ENST00000550009 PCGF6Q9BYE7 350 aa22.54■■□□□ 1.2
COX6A1-203ENST00000550009 PSDA5PKW4 1024 aaPredicted RBP22.52■■□□□ 1.2
COX6A1-203ENST00000550009 EZH2Q15910 746 aaKnown RBP22.52■■□□□ 1.2
COX6A1-203ENST00000550009 BAG6P46379 1132 aa22.51■■□□□ 1.19
COX6A1-203ENST00000550009 TOM1L2Q6ZVM7 507 aa22.51■■□□□ 1.19
COX6A1-203ENST00000550009 USP31Q70CQ4 1352 aa22.5■■□□□ 1.19
COX6A1-203ENST00000550009 RGPD2P0DJD1 1756 aa22.5■■□□□ 1.19
COX6A1-203ENST00000550009 RREB1Q92766 1687 aa22.49■■□□□ 1.19
COX6A1-203ENST00000550009 FBLN1P23142 703 aa22.49■■□□□ 1.19
COX6A1-203ENST00000550009 PDE3BQ13370 1112 aa22.49■■□□□ 1.19
COX6A1-203ENST00000550009 FAM196AQ6ZSG2 479 aa22.49■■□□□ 1.19
COX6A1-203ENST00000550009 PTF1AQ7RTS3 328 aa22.49■■□□□ 1.19
COX6A1-203ENST00000550009 WDR17Q8IZU2 1322 aa22.49■■□□□ 1.19
COX6A1-203ENST00000550009 USP47Q96K76 1375 aa22.49■■□□□ 1.19
COX6A1-203ENST00000550009 EDC4Q6P2E9 1401 aaKnown RBP22.48■■□□□ 1.19
COX6A1-203ENST00000550009 NUP188Q5SRE5 1749 aa22.48■■□□□ 1.19
COX6A1-203ENST00000550009 KCNH5Q8NCM2 988 aa22.48■■□□□ 1.19
COX6A1-203ENST00000550009 THRAP3Q9Y2W1 955 aaKnown RBP22.48■■□□□ 1.19
COX6A1-203ENST00000550009 HDGFL2Q7Z4V5 671 aaPredicted RBP22.47■■□□□ 1.19
COX6A1-203ENST00000550009 OVOS2A0A0J9YW53 1432 aa22.46■■□□□ 1.19
COX6A1-203ENST00000550009 DISP2A7MBM2 1401 aa22.46■■□□□ 1.19
COX6A1-203ENST00000550009 OVOS2Q6IE36 1432 aa22.46■■□□□ 1.19
COX6A1-203ENST00000550009 MYOM1P52179 1685 aa22.46■■□□□ 1.19
COX6A1-203ENST00000550009 APBA3O96018 575 aa22.45■■□□□ 1.18
COX6A1-203ENST00000550009 CAMKK2Q96RR4 588 aa22.45■■□□□ 1.18
COX6A1-203ENST00000550009 KAT6BQ8WYB5 2073 aa22.44■■□□□ 1.18
COX6A1-203ENST00000550009 CSB-PGBD3P0DP91 1061 aa22.43■■□□□ 1.18
COX6A1-203ENST00000550009 MARCH10Q8NA82 808 aaPredicted RBP22.42■■□□□ 1.18
COX6A1-203ENST00000550009 PUS7Q96PZ0 661 aaKnown RBP22.42■■□□□ 1.18
COX6A1-203ENST00000550009 TERF2IPQ9NYB0 399 aa22.42■■□□□ 1.18
COX6A1-203ENST00000550009 CARD10Q9BWT7 1032 aa22.41■■□□□ 1.18
COX6A1-203ENST00000550009 KIF20BQ96Q89 1820 aa22.41■■□□□ 1.18
COX6A1-203ENST00000550009 R3HDM1Q15032 1099 aaKnown RBP22.4■■□□□ 1.18
COX6A1-203ENST00000550009 DDB1Q16531 1140 aa22.4■■□□□ 1.18
COX6A1-203ENST00000550009 ABCC6O95255 1503 aa22.4■■□□□ 1.18
COX6A1-203ENST00000550009 OVOS2A0A0G2JMS6 1433 aa22.38■■□□□ 1.17
COX6A1-203ENST00000550009 ERBB3P21860 1342 aa22.37■■□□□ 1.17
COX6A1-203ENST00000550009 LRP5O75197 1615 aa22.37■■□□□ 1.17
COX6A1-203ENST00000550009 ANKRD24Q8TF21 1146 aa22.36■■□□□ 1.17
COX6A1-203ENST00000550009 ANKRD36BQ8N2N9 1353 aa22.36■■□□□ 1.17
COX6A1-203ENST00000550009 TMF1P82094 1093 aa22.35■■□□□ 1.17
COX6A1-203ENST00000550009 LTV1Q96GA3 475 aaPredicted RBP22.35■■□□□ 1.17
COX6A1-203ENST00000550009 NLRP2Q9NX02 1062 aa22.35■■□□□ 1.17
COX6A1-203ENST00000550009 GGNBP2Q9H3C7 697 aa22.34■■□□□ 1.17
COX6A1-203ENST00000550009 NINLQ9Y2I6 1382 aa22.34■■□□□ 1.17
COX6A1-203ENST00000550009 FAM208AQ9UK61 1670 aaKnown RBP22.33■■□□□ 1.17
COX6A1-203ENST00000550009 MAP3K19Q56UN5 1328 aa22.32■■□□□ 1.16
COX6A1-203ENST00000550009 SHANK3Q9BYB0 1731 aa22.32■■□□□ 1.16
COX6A1-203ENST00000550009 RGPD3A6NKT7 1758 aaPredicted RBP22.32■■□□□ 1.16
COX6A1-203ENST00000550009 RGPD4Q7Z3J3 1758 aa22.32■■□□□ 1.16
COX6A1-203ENST00000550009 TNS2Q63HR2 1409 aa22.31■■□□□ 1.16
COX6A1-203ENST00000550009 CCDC7Q96M83 1385 aa22.31■■□□□ 1.16
COX6A1-203ENST00000550009 FYB1O15117 783 aa22.31■■□□□ 1.16
COX6A1-203ENST00000550009 RRS1Q15050 365 aaKnown RBP22.31■■□□□ 1.16
COX6A1-203ENST00000550009 CARD14Q9BXL6 1004 aa22.31■■□□□ 1.16
COX6A1-203ENST00000550009 KCNQ2O43526 872 aa22.3■■□□□ 1.16
COX6A1-203ENST00000550009 IP6K1Q92551 441 aa22.3■■□□□ 1.16
COX6A1-203ENST00000550009 COG3Q96JB2 828 aa22.3■■□□□ 1.16
COX6A1-203ENST00000550009 EXOC5O00471 708 aa22.29■■□□□ 1.16
COX6A1-203ENST00000550009 NHSQ6T4R5 1651 aa22.29■■□□□ 1.16
COX6A1-203ENST00000550009 BTAF1O14981 1849 aa22.29■■□□□ 1.16
COX6A1-203ENST00000550009 HOXC9P31274 260 aa22.28■■□□□ 1.16
COX6A1-203ENST00000550009 PROM2Q8N271 834 aa22.28■■□□□ 1.16
COX6A1-203ENST00000550009 ACSBG1Q96GR2 724 aa22.28■■□□□ 1.16
COX6A1-203ENST00000550009 CDCA7Q9BWT1 371 aaPredicted RBP22.27■■□□□ 1.16
COX6A1-203ENST00000550009 CLSPNQ9HAW4 1339 aa22.27■■□□□ 1.16
COX6A1-203ENST00000550009 MAP2P11137 1827 aaKnown RBP22.27■■□□□ 1.15
COX6A1-203ENST00000550009 BCL11BQ9C0K0 894 aaPredicted RBP22.26■■□□□ 1.15
COX6A1-203ENST00000550009 ANO8Q9HCE9 1232 aaPredicted RBP22.26■■□□□ 1.15
COX6A1-203ENST00000550009 PARD3Q8TEW0 1356 aa22.25■■□□□ 1.15
COX6A1-203ENST00000550009 IL2RBP14784 551 aa22.25■■□□□ 1.15
COX6A1-203ENST00000550009 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
COX6A1-203ENST00000550009 BCL9O00512 1426 aa22.24■■□□□ 1.15
COX6A1-203ENST00000550009 NSD3Q9BZ95 1437 aa22.24■■□□□ 1.15
COX6A1-203ENST00000550009 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
COX6A1-203ENST00000550009 AMPHP49418 695 aa22.23■■□□□ 1.15
COX6A1-203ENST00000550009 USHBP1Q8N6Y0 703 aa22.23■■□□□ 1.15
COX6A1-203ENST00000550009 PDGFDQ9GZP0 370 aaPredicted RBP22.23■■□□□ 1.15
COX6A1-203ENST00000550009 POLR3GLQ9BT43 218 aa22.22■■□□□ 1.15
COX6A1-203ENST00000550009 DOT1LQ8TEK3 1739 aa22.22■■□□□ 1.15
COX6A1-203ENST00000550009 CASZ1Q86V15 1759 aa22.22■■□□□ 1.15
COX6A1-203ENST00000550009 MEGF6O75095 1541 aa22.21■■□□□ 1.15
COX6A1-203ENST00000550009 PLSCR1O15162 318 aa22.21■■□□□ 1.15
COX6A1-203ENST00000550009 SLC24A1O60721 1099 aa22.21■■□□□ 1.15
COX6A1-203ENST00000550009 HSPA5P11021 654 aaKnown RBP22.21■■□□□ 1.15
COX6A1-203ENST00000550009 NBPF6Q5VWK0 638 aa22.19■■□□□ 1.14
COX6A1-203ENST00000550009 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
COX6A1-203ENST00000550009 HSP90AB2PQ58FF8 381 aa22.18■■□□□ 1.14
COX6A1-203ENST00000550009 DDX54Q8TDD1 881 aaKnown RBP22.18■■□□□ 1.14
COX6A1-203ENST00000550009 ANKRD26Q9UPS8 1709 aa22.17■■□□□ 1.14
COX6A1-203ENST00000550009 C11orf95C9JLR9 678 aaPredicted RBP22.17■■□□□ 1.14
COX6A1-203ENST00000550009 EMILIN1Q9Y6C2 1016 aa22.17■■□□□ 1.14
COX6A1-203ENST00000550009 TXNRD1Q16881 649 aa22.16■■□□□ 1.14
COX6A1-203ENST00000550009 CDCA8Q53HL2 280 aa22.16■■□□□ 1.14
COX6A1-203ENST00000550009 NBPF14Q5TI25 921 aa22.15■■□□□ 1.14
COX6A1-203ENST00000550009 RTL1A6NKG5 1358 aa22.14■■□□□ 1.14
COX6A1-203ENST00000550009 TUBGCP6Q96RT7 1819 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms