RNA–Protein interactions for RNA: ENST00000549971.5

CACNB3-212, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-212ENST00000549971 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
CACNB3-212ENST00000549971 EIF4A2Q14240 407 aaKnown RBP16.44■□□□□ 0.22
CACNB3-212ENST00000549971 TRMT2AQ8IZ69 625 aaKnown RBP16.44■□□□□ 0.22
CACNB3-212ENST00000549971 PEAK1Q9H792 1746 aa16.44■□□□□ 0.22
CACNB3-212ENST00000549971 TNS3Q68CZ2 1445 aa16.44■□□□□ 0.22
CACNB3-212ENST00000549971 TMPOP42166 694 aaKnown RBP16.43■□□□□ 0.22
CACNB3-212ENST00000549971 ABCC6O95255 1503 aa16.43■□□□□ 0.22
CACNB3-212ENST00000549971 ALS2Q96Q42 1657 aa16.43■□□□□ 0.22
CACNB3-212ENST00000549971 RGPD1P0DJD0 1748 aa16.42■□□□□ 0.22
CACNB3-212ENST00000549971 FBLN1P23142 703 aa16.42■□□□□ 0.22
CACNB3-212ENST00000549971 PRKAR2BP31323 418 aa16.42■□□□□ 0.22
CACNB3-212ENST00000549971 DUSP27Q5VZP5 1158 aa16.42■□□□□ 0.22
CACNB3-212ENST00000549971 MYH16Q9H6N6 1097 aa16.42■□□□□ 0.22
CACNB3-212ENST00000549971 RCAN3Q9UKA8 241 aa16.42■□□□□ 0.22
CACNB3-212ENST00000549971 KDRP35968 1356 aa16.41■□□□□ 0.22
CACNB3-212ENST00000549971 HOXC9P31274 260 aa16.41■□□□□ 0.22
CACNB3-212ENST00000549971 SLAIN2Q9P270 581 aa16.41■□□□□ 0.22
CACNB3-212ENST00000549971 MED1Q15648 1581 aaPredicted RBP16.41■□□□□ 0.22
CACNB3-212ENST00000549971 PXDNQ92626 1479 aa16.41■□□□□ 0.22
CACNB3-212ENST00000549971 NFE2L2Q16236 605 aa16.4■□□□□ 0.22
CACNB3-212ENST00000549971 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
CACNB3-212ENST00000549971 IP6K1Q92551 441 aa16.4■□□□□ 0.22
CACNB3-212ENST00000549971 CDCA7LQ96GN5 454 aa16.4■□□□□ 0.22
CACNB3-212ENST00000549971 IGSF1Q8N6C5 1336 aa16.4■□□□□ 0.22
CACNB3-212ENST00000549971 GCP02774 474 aa16.39■□□□□ 0.21
CACNB3-212ENST00000549971 CT47B1P0C2W7 299 aaPredicted RBP16.39■□□□□ 0.21
CACNB3-212ENST00000549971 BRINP3Q76B58 766 aa16.39■□□□□ 0.21
CACNB3-212ENST00000549971 CERKQ8TCT0 537 aa16.39■□□□□ 0.21
CACNB3-212ENST00000549971 SOX12O15370 315 aa16.38■□□□□ 0.21
CACNB3-212ENST00000549971 RIPK4P57078 832 aa16.38■□□□□ 0.21
CACNB3-212ENST00000549971 FKBP8Q14318 412 aa16.38■□□□□ 0.21
CACNB3-212ENST00000549971 NUTM2GQ5VZR2 741 aa16.38■□□□□ 0.21
CACNB3-212ENST00000549971 SPATA31A3Q5VYP0 1347 aa16.38■□□□□ 0.21
CACNB3-212ENST00000549971 SULT6B1Q6IMI4 303 aa16.37■□□□□ 0.21
CACNB3-212ENST00000549971 ARHGEF25Q86VW2 580 aa16.37■□□□□ 0.21
CACNB3-212ENST00000549971 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-212ENST00000549971 SOS2Q07890 1332 aaPredicted RBP16.37■□□□□ 0.21
CACNB3-212ENST00000549971 HMOX1P09601 288 aa16.36■□□□□ 0.21
CACNB3-212ENST00000549971 NEUROD2Q15784 382 aa16.36■□□□□ 0.21
CACNB3-212ENST00000549971 PLEKHG2Q9H7P9 1386 aa16.36■□□□□ 0.21
CACNB3-212ENST00000549971 LTN1O94822 1766 aa16.36■□□□□ 0.21
CACNB3-212ENST00000549971 SENP3-EIF4A1A0A087X0R7 540 aa16.35■□□□□ 0.21
CACNB3-212ENST00000549971 LMOD2Q6P5Q4 547 aa16.35■□□□□ 0.21
CACNB3-212ENST00000549971 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
CACNB3-212ENST00000549971 RRP1P56182 461 aaKnown RBP16.34■□□□□ 0.21
CACNB3-212ENST00000549971 XPCQ01831 940 aaPredicted RBP16.34■□□□□ 0.21
CACNB3-212ENST00000549971 GAS2L2Q8NHY3 880 aa16.34■□□□□ 0.21
CACNB3-212ENST00000549971 TRIM35Q9UPQ4 493 aa16.34■□□□□ 0.21
CACNB3-212ENST00000549971 LTBP4Q8N2S1 1624 aa16.34■□□□□ 0.21
CACNB3-212ENST00000549971 CPDO75976 1380 aa16.33■□□□□ 0.2
CACNB3-212ENST00000549971 NHSL1Q5SYE7 1610 aa16.33■□□□□ 0.2
CACNB3-212ENST00000549971 HTATSF1O43719 755 aaKnown RBP16.32■□□□□ 0.2
CACNB3-212ENST00000549971 PELP1Q8IZL8 1130 aaKnown RBP16.32■□□□□ 0.2
CACNB3-212ENST00000549971 EYA1Q99502 592 aa16.32■□□□□ 0.2
CACNB3-212ENST00000549971 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
CACNB3-212ENST00000549971 PHACTR3Q96KR7 559 aa16.31■□□□□ 0.2
CACNB3-212ENST00000549971 GNAI1P63096 354 aa16.3■□□□□ 0.2
CACNB3-212ENST00000549971 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
CACNB3-212ENST00000549971 IFT57Q9NWB7 429 aa16.3■□□□□ 0.2
CACNB3-212ENST00000549971 HAP1P54257 671 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-212ENST00000549971 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
CACNB3-212ENST00000549971 CRYBG1Q9Y4K1 1723 aa16.28■□□□□ 0.2
CACNB3-212ENST00000549971 FAM208AQ9UK61 1670 aaKnown RBP16.28■□□□□ 0.2
CACNB3-212ENST00000549971 CAMTA1Q9Y6Y1 1673 aa16.28■□□□□ 0.2
CACNB3-212ENST00000549971 AHDC1Q5TGY3 1603 aaPredicted RBP16.28■□□□□ 0.2
CACNB3-212ENST00000549971 AEBP1Q8IUX7 1158 aa16.28■□□□□ 0.2
CACNB3-212ENST00000549971 PPP4R2Q9NY27 417 aa16.28■□□□□ 0.2
CACNB3-212ENST00000549971 FANCIQ9NVI1 1328 aa16.27■□□□□ 0.2
CACNB3-212ENST00000549971 AMOTQ4VCS5 1084 aa16.26■□□□□ 0.19
CACNB3-212ENST00000549971 RTF1Q92541 710 aaKnown RBP16.26■□□□□ 0.19
CACNB3-212ENST00000549971 ERBB3P21860 1342 aa16.25■□□□□ 0.19
CACNB3-212ENST00000549971 ANKRD24Q8TF21 1146 aa16.25■□□□□ 0.19
CACNB3-212ENST00000549971 CFAP44Q96MT7 982 aa16.25■□□□□ 0.19
CACNB3-212ENST00000549971 ZNF853P0CG23 659 aa16.24■□□□□ 0.19
CACNB3-212ENST00000549971 DDX17Q92841 729 aaKnown RBP16.24■□□□□ 0.19
CACNB3-212ENST00000549971 LRRC59Q96AG4 307 aaKnown RBP16.24■□□□□ 0.19
CACNB3-212ENST00000549971 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
CACNB3-212ENST00000549971 MS4A1P11836 297 aa16.23■□□□□ 0.19
CACNB3-212ENST00000549971 LTV1Q96GA3 475 aaPredicted RBP16.23■□□□□ 0.19
CACNB3-212ENST00000549971 LMO7Q8WWI1 1683 aa16.23■□□□□ 0.19
CACNB3-212ENST00000549971 ZBTB7CA1YPR0 619 aa16.22■□□□□ 0.19
CACNB3-212ENST00000549971 TOM1O60784 492 aa16.22■□□□□ 0.19
CACNB3-212ENST00000549971 MTHFSDQ2M296 383 aaKnown RBP16.22■□□□□ 0.19
CACNB3-212ENST00000549971 ILDR2Q71H61 639 aa16.22■□□□□ 0.19
CACNB3-212ENST00000549971 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
CACNB3-212ENST00000549971 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.19
CACNB3-212ENST00000549971 GNAT3A8MTJ3 354 aa16.21■□□□□ 0.19
CACNB3-212ENST00000549971 ZC3H6P61129 1189 aaKnown RBP16.21■□□□□ 0.19
CACNB3-212ENST00000549971 AAMPQ13685 434 aa16.21■□□□□ 0.19
CACNB3-212ENST00000549971 ALDH1L2Q3SY69 923 aa16.21■□□□□ 0.19
CACNB3-212ENST00000549971 PLEKHO1Q53GL0 409 aaPredicted RBP16.21■□□□□ 0.19
CACNB3-212ENST00000549971 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
CACNB3-212ENST00000549971 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
CACNB3-212ENST00000549971 COL18A1P39060 1754 aa16.21■□□□□ 0.18
CACNB3-212ENST00000549971 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
CACNB3-212ENST00000549971 DLG5Q8TDM6 1919 aa16.2■□□□□ 0.18
CACNB3-212ENST00000549971 RARSP54136 660 aaKnown RBP16.2■□□□□ 0.18
CACNB3-212ENST00000549971 PDE3AQ14432 1141 aa16.2■□□□□ 0.18
CACNB3-212ENST00000549971 KIAA0232Q92628 1395 aa16.2■□□□□ 0.18
CACNB3-212ENST00000549971 SOS1Q07889 1333 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms