RNA–Protein interactions for RNA: ENST00000549718.5

LINC00661-205, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-205ENST00000549718 HDGFL2Q7Z4V5 671 aaPredicted RBP22.8■■□□□ 1.24
LINC00661-205ENST00000549718 ARHGEF25Q86VW2 580 aa22.8■■□□□ 1.24
LINC00661-205ENST00000549718 TESK2Q96S53 571 aa22.8■■□□□ 1.24
LINC00661-205ENST00000549718 USP31Q70CQ4 1352 aa22.79■■□□□ 1.24
LINC00661-205ENST00000549718 ST20-MTHFSA0A0A6YYL1 179 aa22.79■■□□□ 1.24
LINC00661-205ENST00000549718 PDE3BQ13370 1112 aa22.79■■□□□ 1.24
LINC00661-205ENST00000549718 SLC12A5Q9H2X9 1139 aa22.79■■□□□ 1.24
LINC00661-205ENST00000549718 AXIN2Q9Y2T1 843 aa22.79■■□□□ 1.24
LINC00661-205ENST00000549718 WDR17Q8IZU2 1322 aa22.79■■□□□ 1.24
LINC00661-205ENST00000549718 RREB1Q92766 1687 aa22.78■■□□□ 1.24
LINC00661-205ENST00000549718 SBF2Q86WG5 1849 aa22.78■■□□□ 1.24
LINC00661-205ENST00000549718 PUS7Q96PZ0 661 aaKnown RBP22.78■■□□□ 1.24
LINC00661-205ENST00000549718 EN1Q05925 392 aaPredicted RBP22.77■■□□□ 1.24
LINC00661-205ENST00000549718 TOM1L2Q6ZVM7 507 aa22.77■■□□□ 1.24
LINC00661-205ENST00000549718 NME9Q86XW9 330 aa22.77■■□□□ 1.24
LINC00661-205ENST00000549718 NINLQ9Y2I6 1382 aa22.76■■□□□ 1.23
LINC00661-205ENST00000549718 TRIM37O94972 964 aa22.76■■□□□ 1.23
LINC00661-205ENST00000549718 TERF2IPQ9NYB0 399 aa22.76■■□□□ 1.23
LINC00661-205ENST00000549718 USP47Q96K76 1375 aa22.76■■□□□ 1.23
LINC00661-205ENST00000549718 OVOS2A0A0J9YW53 1432 aa22.74■■□□□ 1.23
LINC00661-205ENST00000549718 OVOS2Q6IE36 1432 aa22.74■■□□□ 1.23
LINC00661-205ENST00000549718 NUP188Q5SRE5 1749 aa22.74■■□□□ 1.23
LINC00661-205ENST00000549718 LRP5O75197 1615 aa22.74■■□□□ 1.23
LINC00661-205ENST00000549718 OVOS2A0A0G2JMS6 1433 aa22.73■■□□□ 1.23
LINC00661-205ENST00000549718 SLC24A1O60721 1099 aa22.71■■□□□ 1.23
LINC00661-205ENST00000549718 CSB-PGBD3P0DP91 1061 aa22.71■■□□□ 1.23
LINC00661-205ENST00000549718 RGPD3A6NKT7 1758 aaPredicted RBP22.71■■□□□ 1.23
LINC00661-205ENST00000549718 RGPD4Q7Z3J3 1758 aa22.71■■□□□ 1.23
LINC00661-205ENST00000549718 MYOM1P52179 1685 aa22.7■■□□□ 1.22
LINC00661-205ENST00000549718 FAM208AQ9UK61 1670 aaKnown RBP22.7■■□□□ 1.22
LINC00661-205ENST00000549718 EZH2Q15910 746 aaKnown RBP22.69■■□□□ 1.22
LINC00661-205ENST00000549718 DDB1Q16531 1140 aa22.69■■□□□ 1.22
LINC00661-205ENST00000549718 KIF20BQ96Q89 1820 aa22.68■■□□□ 1.22
LINC00661-205ENST00000549718 SRCAPQ6ZRS2 3230 aa22.68■■□□□ 1.22
LINC00661-205ENST00000549718 PARD3Q8TEW0 1356 aa22.68■■□□□ 1.22
LINC00661-205ENST00000549718 CLSPNQ9HAW4 1339 aa22.68■■□□□ 1.22
LINC00661-205ENST00000549718 PSDA5PKW4 1024 aaPredicted RBP22.68■■□□□ 1.22
LINC00661-205ENST00000549718 APBA3O96018 575 aa22.68■■□□□ 1.22
LINC00661-205ENST00000549718 CARD10Q9BWT7 1032 aa22.68■■□□□ 1.22
LINC00661-205ENST00000549718 ANKRD36BQ8N2N9 1353 aa22.67■■□□□ 1.22
LINC00661-205ENST00000549718 CCDC7Q96M83 1385 aa22.67■■□□□ 1.22
LINC00661-205ENST00000549718 CAMKK2Q96RR4 588 aa22.67■■□□□ 1.22
LINC00661-205ENST00000549718 PCGF6Q9BYE7 350 aa22.67■■□□□ 1.22
LINC00661-205ENST00000549718 ERBB3P21860 1342 aa22.66■■□□□ 1.22
LINC00661-205ENST00000549718 C11orf95C9JLR9 678 aaPredicted RBP22.66■■□□□ 1.22
LINC00661-205ENST00000549718 CDCA7Q9BWT1 371 aaPredicted RBP22.66■■□□□ 1.22
LINC00661-205ENST00000549718 TMF1P82094 1093 aa22.65■■□□□ 1.22
LINC00661-205ENST00000549718 TIMELESSQ9UNS1 1208 aa22.64■■□□□ 1.21
LINC00661-205ENST00000549718 TNS2Q63HR2 1409 aa22.64■■□□□ 1.21
LINC00661-205ENST00000549718 R3HDM1Q15032 1099 aaKnown RBP22.61■■□□□ 1.21
LINC00661-205ENST00000549718 RGPD2P0DJD1 1756 aa22.61■■□□□ 1.21
LINC00661-205ENST00000549718 BCL9O00512 1426 aa22.6■■□□□ 1.21
LINC00661-205ENST00000549718 MARCH10Q8NA82 808 aaPredicted RBP22.6■■□□□ 1.21
LINC00661-205ENST00000549718 ANKRD24Q8TF21 1146 aa22.6■■□□□ 1.21
LINC00661-205ENST00000549718 NHSQ6T4R5 1651 aa22.6■■□□□ 1.21
LINC00661-205ENST00000549718 COG3Q96JB2 828 aa22.59■■□□□ 1.21
LINC00661-205ENST00000549718 NLRP2Q9NX02 1062 aa22.59■■□□□ 1.21
LINC00661-205ENST00000549718 CDCA8Q53HL2 280 aa22.57■■□□□ 1.2
LINC00661-205ENST00000549718 EXOC5O00471 708 aa22.56■■□□□ 1.2
LINC00661-205ENST00000549718 IP6K1Q92551 441 aa22.55■■□□□ 1.2
LINC00661-205ENST00000549718 MAP3K19Q56UN5 1328 aa22.55■■□□□ 1.2
LINC00661-205ENST00000549718 BCL11BQ9C0K0 894 aaPredicted RBP22.54■■□□□ 1.2
LINC00661-205ENST00000549718 IL2RBP14784 551 aa22.53■■□□□ 1.2
LINC00661-205ENST00000549718 PTF1AQ7RTS3 328 aa22.53■■□□□ 1.2
LINC00661-205ENST00000549718 RTL1A6NKG5 1358 aa22.52■■□□□ 1.2
LINC00661-205ENST00000549718 GGNBP2Q9H3C7 697 aa22.52■■□□□ 1.2
LINC00661-205ENST00000549718 BTAF1O14981 1849 aa22.52■■□□□ 1.2
LINC00661-205ENST00000549718 SHANK3Q9BYB0 1731 aa22.51■■□□□ 1.19
LINC00661-205ENST00000549718 FYB1O15117 783 aa22.51■■□□□ 1.19
LINC00661-205ENST00000549718 PLSCR1O15162 318 aa22.51■■□□□ 1.19
LINC00661-205ENST00000549718 FBLN1P23142 703 aa22.51■■□□□ 1.19
LINC00661-205ENST00000549718 HOXC9P31274 260 aa22.51■■□□□ 1.19
LINC00661-205ENST00000549718 NBPF14Q5TI25 921 aa22.5■■□□□ 1.19
LINC00661-205ENST00000549718 LTV1Q96GA3 475 aaPredicted RBP22.5■■□□□ 1.19
LINC00661-205ENST00000549718 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
LINC00661-205ENST00000549718 AMPHP49418 695 aa22.49■■□□□ 1.19
LINC00661-205ENST00000549718 KAT6BQ8WYB5 2073 aa22.49■■□□□ 1.19
LINC00661-205ENST00000549718 ANKRD26Q9UPS8 1709 aa22.48■■□□□ 1.19
LINC00661-205ENST00000549718 CCER1Q8TC90 406 aaPredicted RBP22.48■■□□□ 1.19
LINC00661-205ENST00000549718 RRS1Q15050 365 aaKnown RBP22.47■■□□□ 1.19
LINC00661-205ENST00000549718 DOT1LQ8TEK3 1739 aa22.47■■□□□ 1.19
LINC00661-205ENST00000549718 CASZ1Q86V15 1759 aa22.47■■□□□ 1.19
LINC00661-205ENST00000549718 SMG6Q86US8 1419 aaKnown RBP22.44■■□□□ 1.18
LINC00661-205ENST00000549718 CARD14Q9BXL6 1004 aa22.44■■□□□ 1.18
LINC00661-205ENST00000549718 MEGF6O75095 1541 aa22.43■■□□□ 1.18
LINC00661-205ENST00000549718 KCNQ2O43526 872 aa22.43■■□□□ 1.18
LINC00661-205ENST00000549718 ACSBG1Q96GR2 724 aa22.43■■□□□ 1.18
LINC00661-205ENST00000549718 ANO8Q9HCE9 1232 aaPredicted RBP22.43■■□□□ 1.18
LINC00661-205ENST00000549718 MAP2P11137 1827 aaKnown RBP22.43■■□□□ 1.18
LINC00661-205ENST00000549718 FLT4P35916 1363 aa22.41■■□□□ 1.18
LINC00661-205ENST00000549718 PAPPAQ13219 1627 aa22.41■■□□□ 1.18
LINC00661-205ENST00000549718 KIF24Q5T7B8 1368 aa22.4■■□□□ 1.18
LINC00661-205ENST00000549718 PROM2Q8N271 834 aa22.4■■□□□ 1.18
LINC00661-205ENST00000549718 INSRP06213 1382 aa22.39■■□□□ 1.18
LINC00661-205ENST00000549718 EIF4G2P78344 907 aaKnown RBP eCLIP22.39■■□□□ 1.17
LINC00661-205ENST00000549718 TXNRD1Q16881 649 aa22.39■■□□□ 1.17
LINC00661-205ENST00000549718 POLR3GLQ9BT43 218 aa22.38■■□□□ 1.17
LINC00661-205ENST00000549718 HSPA5P11021 654 aaKnown RBP22.37■■□□□ 1.17
LINC00661-205ENST00000549718 DDX54Q8TDD1 881 aaKnown RBP22.37■■□□□ 1.17
LINC00661-205ENST00000549718 CGNL1Q0VF96 1302 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms