RNA–Protein interactions for RNA: ENST00000549639.1

USP44-205, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-205ENST00000549639 USP54Q70EL1 1684 aa33.92■■■■□ 3.02
USP44-205ENST00000549639 A0A1W2PP64 1363 aa33.91■■■■□ 3.02
USP44-205ENST00000549639 RGPD1P0DJD0 1748 aa33.9■■■■□ 3.02
USP44-205ENST00000549639 NFAT5O94916 1531 aa33.9■■■■□ 3.02
USP44-205ENST00000549639 ABCC6O95255 1503 aa33.9■■■■□ 3.02
USP44-205ENST00000549639 WDR17Q8IZU2 1322 aa33.89■■■■□ 3.02
USP44-205ENST00000549639 FAM182BQ5T319 152 aa33.89■■■■□ 3.02
USP44-205ENST00000549639 AXIN2Q9Y2T1 843 aa33.89■■■■□ 3.02
USP44-205ENST00000549639 SOX12O15370 315 aa33.88■■■■□ 3.01
USP44-205ENST00000549639 TMF1P82094 1093 aa33.88■■■■□ 3.01
USP44-205ENST00000549639 TOM1L2Q6ZVM7 507 aa33.88■■■■□ 3.01
USP44-205ENST00000549639 NME9Q86XW9 330 aa33.87■■■■□ 3.01
USP44-205ENST00000549639 C11orf95C9JLR9 678 aaPredicted RBP33.86■■■■□ 3.01
USP44-205ENST00000549639 PARP4Q9UKK3 1724 aaKnown RBP33.84■■■■□ 3.01
USP44-205ENST00000549639 DISP2A7MBM2 1401 aa33.83■■■■□ 3.01
USP44-205ENST00000549639 CDCA8Q53HL2 280 aa33.83■■■■□ 3.01
USP44-205ENST00000549639 CDCA7Q9BWT1 371 aaPredicted RBP33.83■■■■□ 3.01
USP44-205ENST00000549639 CSB-PGBD3P0DP91 1061 aa33.8■■■■□ 3
USP44-205ENST00000549639 CARD10Q9BWT7 1032 aa33.8■■■■□ 3
USP44-205ENST00000549639 OVOS2A0A0J9YW53 1432 aa33.79■■■■□ 3
USP44-205ENST00000549639 OVOS2Q6IE36 1432 aa33.79■■■■□ 3
USP44-205ENST00000549639 ANKRD36BQ8N2N9 1353 aa33.78■■■■□ 3
USP44-205ENST00000549639 TNS1Q9HBL0 1735 aaKnown RBP33.76■■■■□ 3
USP44-205ENST00000549639 RGPD5Q99666 1765 aa33.76■■■■□ 3
USP44-205ENST00000549639 TRIM37O94972 964 aa33.76■■■□□ 2.99
USP44-205ENST00000549639 DDB1Q16531 1140 aa33.76■■■□□ 2.99
USP44-205ENST00000549639 CCDC7Q96M83 1385 aa33.75■■■□□ 2.99
USP44-205ENST00000549639 EN1Q05925 392 aaPredicted RBP33.75■■■□□ 2.99
USP44-205ENST00000549639 COG3Q96JB2 828 aa33.72■■■□□ 2.99
USP44-205ENST00000549639 PARD3Q8TEW0 1356 aa33.72■■■□□ 2.99
USP44-205ENST00000549639 OVOS2A0A0G2JMS6 1433 aa33.71■■■□□ 2.99
USP44-205ENST00000549639 LTN1O94822 1766 aa33.71■■■□□ 2.99
USP44-205ENST00000549639 CCER1Q8TC90 406 aaPredicted RBP33.71■■■□□ 2.99
USP44-205ENST00000549639 WNK3Q9BYP7 1800 aa33.71■■■□□ 2.99
USP44-205ENST00000549639 LRRC37A3O60309 1634 aa33.71■■■□□ 2.99
USP44-205ENST00000549639 ERBB3P21860 1342 aa33.7■■■□□ 2.99
USP44-205ENST00000549639 APBA3O96018 575 aa33.69■■■□□ 2.98
USP44-205ENST00000549639 CAMKK2Q96RR4 588 aa33.67■■■□□ 2.98
USP44-205ENST00000549639 SRCAPQ6ZRS2 3230 aa33.66■■■□□ 2.98
USP44-205ENST00000549639 EZH2Q15910 746 aaKnown RBP33.64■■■□□ 2.98
USP44-205ENST00000549639 IP6K1Q92551 441 aa33.64■■■□□ 2.98
USP44-205ENST00000549639 PEAK1Q9H792 1746 aa33.64■■■□□ 2.98
USP44-205ENST00000549639 BCL9O00512 1426 aa33.63■■■□□ 2.97
USP44-205ENST00000549639 EXOC5O00471 708 aa33.63■■■□□ 2.97
USP44-205ENST00000549639 ANKRD24Q8TF21 1146 aa33.63■■■□□ 2.97
USP44-205ENST00000549639 NLRP2Q9NX02 1062 aa33.63■■■□□ 2.97
USP44-205ENST00000549639 FYB1O15117 783 aa33.59■■■□□ 2.97
USP44-205ENST00000549639 MARCH10Q8NA82 808 aaPredicted RBP33.58■■■□□ 2.97
USP44-205ENST00000549639 TNS2Q63HR2 1409 aa33.56■■■□□ 2.96
USP44-205ENST00000549639 MAP3K19Q56UN5 1328 aa33.55■■■□□ 2.96
USP44-205ENST00000549639 IL2RBP14784 551 aa33.55■■■□□ 2.96
USP44-205ENST00000549639 BCL11BQ9C0K0 894 aaPredicted RBP33.55■■■□□ 2.96
USP44-205ENST00000549639 AMPHP49418 695 aa33.54■■■□□ 2.96
USP44-205ENST00000549639 FAM208AQ9UK61 1670 aaKnown RBP33.54■■■□□ 2.96
USP44-205ENST00000549639 SBF2Q86WG5 1849 aa33.53■■■□□ 2.96
USP44-205ENST00000549639 RTL1A6NKG5 1358 aa33.53■■■□□ 2.96
USP44-205ENST00000549639 EIF4G2P78344 907 aaKnown RBP eCLIP33.53■■■□□ 2.96
USP44-205ENST00000549639 GGNBP2Q9H3C7 697 aa33.53■■■□□ 2.96
USP44-205ENST00000549639 PSDA5PKW4 1024 aaPredicted RBP33.52■■■□□ 2.96
USP44-205ENST00000549639 PLSCR1O15162 318 aa33.52■■■□□ 2.96
USP44-205ENST00000549639 HOXC9P31274 260 aa33.52■■■□□ 2.96
USP44-205ENST00000549639 MYOM1P52179 1685 aa33.52■■■□□ 2.96
USP44-205ENST00000549639 RREB1Q92766 1687 aa33.52■■■□□ 2.96
USP44-205ENST00000549639 NBPF14Q5TI25 921 aa33.49■■■□□ 2.95
USP44-205ENST00000549639 RGPD3A6NKT7 1758 aaPredicted RBP33.49■■■□□ 2.95
USP44-205ENST00000549639 RGPD4Q7Z3J3 1758 aa33.49■■■□□ 2.95
USP44-205ENST00000549639 R3HDM1Q15032 1099 aaKnown RBP33.48■■■□□ 2.95
USP44-205ENST00000549639 KIF20BQ96Q89 1820 aa33.48■■■□□ 2.95
USP44-205ENST00000549639 CARD14Q9BXL6 1004 aa33.47■■■□□ 2.95
USP44-205ENST00000549639 LTV1Q96GA3 475 aaPredicted RBP33.46■■■□□ 2.95
USP44-205ENST00000549639 NSD3Q9BZ95 1437 aa33.45■■■□□ 2.95
USP44-205ENST00000549639 FBLN1P23142 703 aa33.45■■■□□ 2.95
USP44-205ENST00000549639 LRP5O75197 1615 aa33.45■■■□□ 2.95
USP44-205ENST00000549639 KIF24Q5T7B8 1368 aa33.45■■■□□ 2.94
USP44-205ENST00000549639 NUP188Q5SRE5 1749 aa33.44■■■□□ 2.94
USP44-205ENST00000549639 HSPA5P11021 654 aaKnown RBP33.42■■■□□ 2.94
USP44-205ENST00000549639 RRS1Q15050 365 aaKnown RBP33.42■■■□□ 2.94
USP44-205ENST00000549639 SMG6Q86US8 1419 aaKnown RBP33.4■■■□□ 2.94
USP44-205ENST00000549639 CGNL1Q0VF96 1302 aa33.4■■■□□ 2.94
USP44-205ENST00000549639 FLT4P35916 1363 aa33.37■■■□□ 2.93
USP44-205ENST00000549639 PTF1AQ7RTS3 328 aa33.37■■■□□ 2.93
USP44-205ENST00000549639 INSRP06213 1382 aa33.36■■■□□ 2.93
USP44-205ENST00000549639 POLR3GLQ9BT43 218 aa33.36■■■□□ 2.93
USP44-205ENST00000549639 NHSQ6T4R5 1651 aa33.34■■■□□ 2.93
USP44-205ENST00000549639 KCNQ2O43526 872 aa33.31■■■□□ 2.92
USP44-205ENST00000549639 HSP90AB2PQ58FF8 381 aa33.3■■■□□ 2.92
USP44-205ENST00000549639 NBPF6Q5VWK0 638 aa33.3■■■□□ 2.92
USP44-205ENST00000549639 NBPF4Q96M43 638 aa33.3■■■□□ 2.92
USP44-205ENST00000549639 ACSBG1Q96GR2 724 aa33.29■■■□□ 2.92
USP44-205ENST00000549639 TXNRD1Q16881 649 aa33.28■■■□□ 2.92
USP44-205ENST00000549639 PROM2Q8N271 834 aa33.28■■■□□ 2.92
USP44-205ENST00000549639 ZCRB1Q8TBF4 217 aaKnown RBP33.28■■■□□ 2.92
USP44-205ENST00000549639 DDX54Q8TDD1 881 aaKnown RBP33.28■■■□□ 2.92
USP44-205ENST00000549639 RGPD2P0DJD1 1756 aa33.28■■■□□ 2.92
USP44-205ENST00000549639 RAPGEF4Q8WZA2 1011 aa33.26■■■□□ 2.91
USP44-205ENST00000549639 EMILIN1Q9Y6C2 1016 aa33.25■■■□□ 2.91
USP44-205ENST00000549639 MEGF6O75095 1541 aa33.24■■■□□ 2.91
USP44-205ENST00000549639 PANK3Q9H999 370 aa33.23■■■□□ 2.91
USP44-205ENST00000549639 WASHC2AQ641Q2 1341 aa33.22■■■□□ 2.91
USP44-205ENST00000549639 ANKRD26Q9UPS8 1709 aa33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms