RNA–Protein interactions for RNA: ENST00000549040.5

RFX4-208, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-208ENST00000549040 C11orf95C9JLR9 678 aaPredicted RBP11.43□□□□□ -0.58
RFX4-208ENST00000549040 LAMC1P11047 1609 aa11.42□□□□□ -0.58
RFX4-208ENST00000549040 MAP3K9P80192 1104 aa11.42□□□□□ -0.58
RFX4-208ENST00000549040 CAMK2BQ13554 666 aa11.42□□□□□ -0.58
RFX4-208ENST00000549040 PRAM1Q96QH2 718 aa11.42□□□□□ -0.58
RFX4-208ENST00000549040 KRTAP3-3Q9BYR6 98 aa11.42□□□□□ -0.58
RFX4-208ENST00000549040 KRTAP3-2Q9BYR7 98 aa11.42□□□□□ -0.58
RFX4-208ENST00000549040 EMILIN3Q9NT22 766 aa11.42□□□□□ -0.58
RFX4-208ENST00000549040 ZNF335Q9H4Z2 1342 aaPredicted RBP11.41□□□□□ -0.58
RFX4-208ENST00000549040 PSDA5PKW4 1024 aaPredicted RBP11.41□□□□□ -0.58
RFX4-208ENST00000549040 RBM33Q96EV2 1170 aaKnown RBP11.41□□□□□ -0.58
RFX4-208ENST00000549040 TSHZ2Q9NRE2 1034 aa11.41□□□□□ -0.58
RFX4-208ENST00000549040 WDR70Q9NW82 654 aa11.4□□□□□ -0.58
RFX4-208ENST00000549040 FAM135BQ49AJ0 1406 aa11.4□□□□□ -0.58
RFX4-208ENST00000549040 DLC1Q96QB1 1528 aa11.4□□□□□ -0.59
RFX4-208ENST00000549040 CENPJQ9HC77 1338 aaPredicted RBP11.39□□□□□ -0.59
RFX4-208ENST00000549040 SAFB2Q14151 953 aaKnown RBP eCLIP11.39□□□□□ -0.59
RFX4-208ENST00000549040 XRN1Q8IZH2 1706 aaKnown RBP11.38□□□□□ -0.59
RFX4-208ENST00000549040 CHD2O14647 1828 aaKnown RBP11.38□□□□□ -0.59
RFX4-208ENST00000549040 PROSER2Q86WR7 435 aaPredicted RBP11.38□□□□□ -0.59
RFX4-208ENST00000549040 ANO8Q9HCE9 1232 aaPredicted RBP11.38□□□□□ -0.59
RFX4-208ENST00000549040 POGKQ9P215 609 aa11.38□□□□□ -0.59
RFX4-208ENST00000549040 PTCH1Q13635 1447 aa11.37□□□□□ -0.59
RFX4-208ENST00000549040 STRCP1A6NGW2 1772 aa11.37□□□□□ -0.59
RFX4-208ENST00000549040 EVI5O60447 810 aa11.37□□□□□ -0.59
RFX4-208ENST00000549040 PLCB2Q00722 1185 aa11.37□□□□□ -0.59
RFX4-208ENST00000549040 NWD1Q149M9 1564 aa11.37□□□□□ -0.59
RFX4-208ENST00000549040 CPS1P31327 1500 aa11.36□□□□□ -0.59
RFX4-208ENST00000549040 MINK1Q8N4C8 1332 aaPredicted RBP11.35□□□□□ -0.59
RFX4-208ENST00000549040 EIF3AQ14152 1382 aaKnown RBP11.35□□□□□ -0.59
RFX4-208ENST00000549040 SBNO2Q9Y2G9 1366 aa11.35□□□□□ -0.59
RFX4-208ENST00000549040 TMEM94Q12767 1356 aa11.34□□□□□ -0.59
RFX4-208ENST00000549040 DISP3Q9P2K9 1392 aa11.34□□□□□ -0.59
RFX4-208ENST00000549040 ARHGEF28Q8N1W1 1705 aaKnown RBP11.34□□□□□ -0.59
RFX4-208ENST00000549040 LTBP4Q8N2S1 1624 aa11.34□□□□□ -0.59
RFX4-208ENST00000549040 LRRC7Q96NW7 1537 aa11.34□□□□□ -0.59
RFX4-208ENST00000549040 NKTRP30414 1462 aaKnown RBP11.33□□□□□ -0.6
RFX4-208ENST00000549040 KNDC1Q76NI1 1749 aa11.33□□□□□ -0.6
RFX4-208ENST00000549040 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.33□□□□□ -0.6
RFX4-208ENST00000549040 E2F4Q16254 413 aa11.33□□□□□ -0.6
RFX4-208ENST00000549040 CDK19Q9BWU1 502 aa11.33□□□□□ -0.6
RFX4-208ENST00000549040 WASHC2AQ641Q2 1341 aa11.33□□□□□ -0.6
RFX4-208ENST00000549040 WASLO00401 505 aaPredicted RBP11.32□□□□□ -0.6
RFX4-208ENST00000549040 PPP4R3BQ5MIZ7 849 aa11.32□□□□□ -0.6
RFX4-208ENST00000549040 SPNS2Q8IVW8 549 aa11.32□□□□□ -0.6
RFX4-208ENST00000549040 C19orf44Q9H6X5 657 aa11.32□□□□□ -0.6
RFX4-208ENST00000549040 NCOA3Q9Y6Q9 1424 aa11.32□□□□□ -0.6
RFX4-208ENST00000549040 KIF7Q2M1P5 1343 aa11.32□□□□□ -0.6
RFX4-208ENST00000549040 DPYSL4O14531 572 aa11.31□□□□□ -0.6
RFX4-208ENST00000549040 PBX2P40425 430 aa11.31□□□□□ -0.6
RFX4-208ENST00000549040 TMF1P82094 1093 aa11.31□□□□□ -0.6
RFX4-208ENST00000549040 PUS7Q96PZ0 661 aaKnown RBP11.31□□□□□ -0.6
RFX4-208ENST00000549040 SLC24A1O60721 1099 aa11.3□□□□□ -0.6
RFX4-208ENST00000549040 POTEEQ6S8J3 1075 aa11.3□□□□□ -0.6
RFX4-208ENST00000549040 EVC2Q86UK5 1308 aa11.3□□□□□ -0.6
RFX4-208ENST00000549040 PRR36Q9H6K5 1346 aa11.3□□□□□ -0.6
RFX4-208ENST00000549040 TULP4Q9NRJ4 1543 aa11.3□□□□□ -0.6
RFX4-208ENST00000549040 CCDC7Q96M83 1385 aa11.29□□□□□ -0.6
RFX4-208ENST00000549040 ADGRL3Q9HAR2 1447 aa11.29□□□□□ -0.6
RFX4-208ENST00000549040 ZNF454Q8N9F8 522 aa11.29□□□□□ -0.6
RFX4-208ENST00000549040 ARHGAP33O14559 1287 aa11.28□□□□□ -0.6
RFX4-208ENST00000549040 FOSBP53539 338 aa11.28□□□□□ -0.6
RFX4-208ENST00000549040 NUDT16Q96DE0 195 aaKnown RBP11.28□□□□□ -0.6
RFX4-208ENST00000549040 AXIN2Q9Y2T1 843 aa11.28□□□□□ -0.6
RFX4-208ENST00000549040 QRICH2Q9H0J4 1663 aa11.27□□□□□ -0.6
RFX4-208ENST00000549040 NUTM2FA1L443 756 aa11.27□□□□□ -0.61
RFX4-208ENST00000549040 SLC12A5Q9H2X9 1139 aa11.27□□□□□ -0.61
RFX4-208ENST00000549040 ADGRB2O60241 1585 aa11.26□□□□□ -0.61
RFX4-208ENST00000549040 SRPK2P78362 688 aaKnown RBP11.26□□□□□ -0.61
RFX4-208ENST00000549040 C14orf37Q86TY3 774 aa11.26□□□□□ -0.61
RFX4-208ENST00000549040 ARIH1Q9Y4X5 557 aaPredicted RBP11.26□□□□□ -0.61
RFX4-208ENST00000549040 XIRP1Q702N8 1843 aaKnown RBP11.25□□□□□ -0.61
RFX4-208ENST00000549040 LSM11P83369 360 aaKnown RBP eCLIP11.25□□□□□ -0.61
RFX4-208ENST00000549040 CDCA8Q53HL2 280 aa11.25□□□□□ -0.61
RFX4-208ENST00000549040 ANKRD13DQ6ZTN6 518 aa11.25□□□□□ -0.61
RFX4-208ENST00000549040 CABP1Q9NZU7 370 aa11.25□□□□□ -0.61
RFX4-208ENST00000549040 NALCNQ8IZF0 1738 aa11.24□□□□□ -0.61
RFX4-208ENST00000549040 PLEKHG3A1L390 1219 aa11.24□□□□□ -0.61
RFX4-208ENST00000549040 CERKQ8TCT0 537 aa11.24□□□□□ -0.61
RFX4-208ENST00000549040 ORAI2Q96SN7 254 aa11.24□□□□□ -0.61
RFX4-208ENST00000549040 ATF3P18847 181 aa11.23□□□□□ -0.61
RFX4-208ENST00000549040 DDX10Q13206 875 aaKnown RBP11.23□□□□□ -0.61
RFX4-208ENST00000549040 ZDHHC16Q969W1 377 aa11.23□□□□□ -0.61
RFX4-208ENST00000549040 POLR3GLQ9BT43 218 aa11.23□□□□□ -0.61
RFX4-208ENST00000549040 CARD14Q9BXL6 1004 aa11.23□□□□□ -0.61
RFX4-208ENST00000549040 SLAIN2Q9P270 581 aa11.23□□□□□ -0.61
RFX4-208ENST00000549040 MSH6P52701 1360 aa11.23□□□□□ -0.61
RFX4-208ENST00000549040 DCCP43146 1447 aa11.23□□□□□ -0.61
RFX4-208ENST00000549040 MST1RQ04912 1400 aa11.23□□□□□ -0.61
RFX4-208ENST00000549040 ATP7BP35670 1465 aa11.23□□□□□ -0.61
RFX4-208ENST00000549040 SPDYE16A6NNV3 312 aaPredicted RBP11.22□□□□□ -0.61
RFX4-208ENST00000549040 PER1O15534 1290 aaPredicted RBP11.22□□□□□ -0.61
RFX4-208ENST00000549040 MMRN1Q13201 1228 aa11.22□□□□□ -0.61
RFX4-208ENST00000549040 CDC42BPGQ6DT37 1551 aa11.22□□□□□ -0.61
RFX4-208ENST00000549040 ATAD2Q6PL18 1390 aa11.22□□□□□ -0.61
RFX4-208ENST00000549040 USP32Q8NFA0 1604 aa11.22□□□□□ -0.61
RFX4-208ENST00000549040 PANK3Q9H999 370 aa11.22□□□□□ -0.61
RFX4-208ENST00000549040 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
RFX4-208ENST00000549040 C1orf167Q5SNV9 1468 aa11.21□□□□□ -0.61
RFX4-208ENST00000549040 CD163L1Q9NR16 1453 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms