RNA–Protein interactions for RNA: ENST00000548629.5

MMP19-206, Transcript of matrix metallopeptidase 19, humanhuman

TSL 5 BASIC

Gene MMP19, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-206ENST00000548629 CCDC61Q9Y6R9 512 aa16.24■□□□□ 0.19
MMP19-206ENST00000548629 CDK12Q9NYV4 1490 aaPredicted RBP16.23■□□□□ 0.19
MMP19-206ENST00000548629 NUDT16Q96DE0 195 aaKnown RBP16.23■□□□□ 0.19
MMP19-206ENST00000548629 CHMP4BQ9H444 224 aaKnown RBP16.23■□□□□ 0.19
MMP19-206ENST00000548629 PCDHB15Q9Y5E8 787 aa16.23■□□□□ 0.19
MMP19-206ENST00000548629 MAP2P11137 1827 aaKnown RBP16.23■□□□□ 0.19
MMP19-206ENST00000548629 PTCH1Q13635 1447 aa16.23■□□□□ 0.19
MMP19-206ENST00000548629 ITSN1Q15811 1721 aa16.22■□□□□ 0.19
MMP19-206ENST00000548629 EXOSC9Q06265 439 aaKnown RBP16.22■□□□□ 0.19
MMP19-206ENST00000548629 HDAC1Q13547 482 aaPredicted RBP16.22■□□□□ 0.19
MMP19-206ENST00000548629 ATF7IPQ6VMQ6 1270 aa16.22■□□□□ 0.19
MMP19-206ENST00000548629 BCL2L13Q9BXK5 485 aa16.22■□□□□ 0.19
MMP19-206ENST00000548629 RIPK4P57078 832 aa16.22■□□□□ 0.19
MMP19-206ENST00000548629 PDZRN3Q9UPQ7 1066 aa16.22■□□□□ 0.19
MMP19-206ENST00000548629 AKAP12Q02952 1782 aa16.21■□□□□ 0.19
MMP19-206ENST00000548629 CPSF1Q10570 1443 aaKnown RBP16.21■□□□□ 0.19
MMP19-206ENST00000548629 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.19
MMP19-206ENST00000548629 TOM1O60784 492 aa16.21■□□□□ 0.19
MMP19-206ENST00000548629 NFKBIBQ15653 356 aa16.21■□□□□ 0.19
MMP19-206ENST00000548629 BRPF1P55201 1214 aaPredicted RBP16.2■□□□□ 0.18
MMP19-206ENST00000548629 USP19O94966 1318 aa16.19■□□□□ 0.18
MMP19-206ENST00000548629 TSR2Q969E8 191 aaKnown RBP16.19■□□□□ 0.18
MMP19-206ENST00000548629 ZNF692Q9BU19 519 aaPredicted RBP16.19■□□□□ 0.18
MMP19-206ENST00000548629 TRIM27P14373 513 aa16.19■□□□□ 0.18
MMP19-206ENST00000548629 SSH1Q8WYL5 1049 aa16.18■□□□□ 0.18
MMP19-206ENST00000548629 LMOD3Q0VAK6 560 aa16.17■□□□□ 0.18
MMP19-206ENST00000548629 C14orf37Q86TY3 774 aa16.17■□□□□ 0.18
MMP19-206ENST00000548629 RSPH6AQ9H0K4 717 aa16.17■□□□□ 0.18
MMP19-206ENST00000548629 PROSER2Q86WR7 435 aaPredicted RBP16.17■□□□□ 0.18
MMP19-206ENST00000548629 ITPRIPQ8IWB1 547 aa16.17■□□□□ 0.18
MMP19-206ENST00000548629 TNNQ9UQP3 1299 aa16.17■□□□□ 0.18
MMP19-206ENST00000548629 NFE2L2Q16236 605 aa16.16■□□□□ 0.18
MMP19-206ENST00000548629 TBC1D32Q96NH3 1257 aa16.16■□□□□ 0.18
MMP19-206ENST00000548629 NRKQ7Z2Y5 1582 aa16.15■□□□□ 0.18
MMP19-206ENST00000548629 POLKQ9UBT6 870 aa16.15■□□□□ 0.18
MMP19-206ENST00000548629 NUTM2FA1L443 756 aa16.15■□□□□ 0.18
MMP19-206ENST00000548629 PLEKHG3A1L390 1219 aa16.14■□□□□ 0.17
MMP19-206ENST00000548629 PRKAR2BP31323 418 aa16.14■□□□□ 0.17
MMP19-206ENST00000548629 SLC4A3P48751 1232 aa16.14■□□□□ 0.17
MMP19-206ENST00000548629 GNAI1P63096 354 aa16.14■□□□□ 0.17
MMP19-206ENST00000548629 PIP4K2BP78356 416 aa16.14■□□□□ 0.17
MMP19-206ENST00000548629 GSE1Q14687 1217 aa16.14■□□□□ 0.17
MMP19-206ENST00000548629 SMC5Q8IY18 1101 aa16.14■□□□□ 0.17
MMP19-206ENST00000548629 ARHGAP45Q92619 1136 aa16.14■□□□□ 0.17
MMP19-206ENST00000548629 NOB1Q9ULX3 412 aaKnown RBP16.14■□□□□ 0.17
MMP19-206ENST00000548629 IFT57Q9NWB7 429 aa16.13■□□□□ 0.17
MMP19-206ENST00000548629 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.12■□□□□ 0.17
MMP19-206ENST00000548629 ZBTB40Q9NUA8 1239 aa16.12■□□□□ 0.17
MMP19-206ENST00000548629 DLG5Q8TDM6 1919 aa16.12■□□□□ 0.17
MMP19-206ENST00000548629 COG3Q96JB2 828 aa16.11■□□□□ 0.17
MMP19-206ENST00000548629 STRCP1A6NGW2 1772 aa16.11■□□□□ 0.17
MMP19-206ENST00000548629 TOPAZ1Q8N9V7 1692 aa16.11■□□□□ 0.17
MMP19-206ENST00000548629 PRR36Q9H6K5 1346 aa16.11■□□□□ 0.17
MMP19-206ENST00000548629 HAP1P54257 671 aaPredicted RBP16.1■□□□□ 0.17
MMP19-206ENST00000548629 TMEM57Q8N5G2 664 aa16.1■□□□□ 0.17
MMP19-206ENST00000548629 NGDNQ8NEJ9 315 aaKnown RBP16.1■□□□□ 0.17
MMP19-206ENST00000548629 XRN1Q8IZH2 1706 aaKnown RBP16.1■□□□□ 0.17
MMP19-206ENST00000548629 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.09■□□□□ 0.17
MMP19-206ENST00000548629 SEC24BO95487 1268 aa16.09■□□□□ 0.17
MMP19-206ENST00000548629 IL13P35225 146 aa16.09■□□□□ 0.17
MMP19-206ENST00000548629 C19orf44Q9H6X5 657 aa16.09■□□□□ 0.17
MMP19-206ENST00000548629 ACEP12821 1306 aa16.09■□□□□ 0.17
MMP19-206ENST00000548629 CHD2O14647 1828 aaKnown RBP16.09■□□□□ 0.17
MMP19-206ENST00000548629 KIF24Q5T7B8 1368 aa16.09■□□□□ 0.17
MMP19-206ENST00000548629 EIF5BO60841 1220 aaKnown RBP16.08■□□□□ 0.17
MMP19-206ENST00000548629 RBM33Q96EV2 1170 aaKnown RBP16.08■□□□□ 0.17
MMP19-206ENST00000548629 GCC1Q96CN9 775 aa16.08■□□□□ 0.16
MMP19-206ENST00000548629 ANKARQ7Z5J8 1434 aa16.07■□□□□ 0.16
MMP19-206ENST00000548629 NALCNQ8IZF0 1738 aa16.07■□□□□ 0.16
MMP19-206ENST00000548629 ZNF853P0CG23 659 aa16.05■□□□□ 0.16
MMP19-206ENST00000548629 NUCB1Q02818 461 aa16.05■□□□□ 0.16
MMP19-206ENST00000548629 ATF3P18847 181 aa16.05■□□□□ 0.16
MMP19-206ENST00000548629 CFAP44Q96MT7 982 aa16.05■□□□□ 0.16
MMP19-206ENST00000548629 API5Q9BZZ5 524 aaKnown RBP16.05■□□□□ 0.16
MMP19-206ENST00000548629 EMILIN1Q9Y6C2 1016 aa16.05■□□□□ 0.16
MMP19-206ENST00000548629 ADGRL3Q9HAR2 1447 aa16.05■□□□□ 0.16
MMP19-206ENST00000548629 VAMP4O75379 141 aa16.04■□□□□ 0.16
MMP19-206ENST00000548629 HSPA1LP34931 641 aa16.04■□□□□ 0.16
MMP19-206ENST00000548629 NME9Q86XW9 330 aa16.04■□□□□ 0.16
MMP19-206ENST00000548629 MRPL50Q8N5N7 158 aaKnown RBP16.04■□□□□ 0.16
MMP19-206ENST00000548629 C22orf23Q9BZE7 217 aa16.04■□□□□ 0.16
MMP19-206ENST00000548629 ABCC4O15439 1325 aa16.04■□□□□ 0.16
MMP19-206ENST00000548629 NCOA3Q9Y6Q9 1424 aa16.04■□□□□ 0.16
MMP19-206ENST00000548629 FRAT2O75474 233 aaPredicted RBP16.03■□□□□ 0.16
MMP19-206ENST00000548629 ESCO1Q5FWF5 840 aa16.03■□□□□ 0.16
MMP19-206ENST00000548629 PHF8Q9UPP1 1060 aa16.03■□□□□ 0.16
MMP19-206ENST00000548629 HMOX1P09601 288 aa16.03■□□□□ 0.16
MMP19-206ENST00000548629 TTC21BQ7Z4L5 1316 aa16.02■□□□□ 0.16
MMP19-206ENST00000548629 CHD1LQ86WJ1 897 aa16.02■□□□□ 0.16
MMP19-206ENST00000548629 TMEM94Q12767 1356 aa16.01■□□□□ 0.15
MMP19-206ENST00000548629 BMP2KLQ5H9B9 411 aa16.01■□□□□ 0.15
MMP19-206ENST00000548629 PHACTR3Q96KR7 559 aa16.01■□□□□ 0.15
MMP19-206ENST00000548629 TBC1D2Q9BYX2 928 aa16.01■□□□□ 0.15
MMP19-206ENST00000548629 OVOS2A0A0J9YW53 1432 aa16.01■□□□□ 0.15
MMP19-206ENST00000548629 OVOS2Q6IE36 1432 aa16.01■□□□□ 0.15
MMP19-206ENST00000548629 RGPD1P0DJD0 1748 aa16.01■□□□□ 0.15
MMP19-206ENST00000548629 TTC21AQ8NDW8 1320 aa16.01■□□□□ 0.15
MMP19-206ENST00000548629 TWISTNBQ3B726 338 aaPredicted RBP16.01■□□□□ 0.15
MMP19-206ENST00000548629 CADPS2Q86UW7 1296 aa16.01■□□□□ 0.15
MMP19-206ENST00000548629 ANTXR1Q9H6X2 564 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms