RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 AFF2P51816 1311 aa23.51■■□□□ 1.35
LETMD1-216ENST00000548401 BLMP54132 1417 aaPredicted RBP23.5■■□□□ 1.35
LETMD1-216ENST00000548401 TNNT2P45379 298 aaPredicted RBP23.5■■□□□ 1.35
LETMD1-216ENST00000548401 EMILIN1Q9Y6C2 1016 aa23.5■■□□□ 1.35
LETMD1-216ENST00000548401 FAM208AQ9UK61 1670 aaKnown RBP23.49■■□□□ 1.35
LETMD1-216ENST00000548401 POLKQ9UBT6 870 aa23.49■■□□□ 1.35
LETMD1-216ENST00000548401 FLT4P35916 1363 aa23.49■■□□□ 1.35
LETMD1-216ENST00000548401 CNGB1Q14028 1251 aaPredicted RBP23.48■■□□□ 1.35
LETMD1-216ENST00000548401 NGLY1Q96IV0 654 aa23.48■■□□□ 1.35
LETMD1-216ENST00000548401 ZBTB7CA1YPR0 619 aa23.47■■□□□ 1.35
LETMD1-216ENST00000548401 AXIN2Q9Y2T1 843 aa23.47■■□□□ 1.35
LETMD1-216ENST00000548401 ATRNO75882 1429 aa23.46■■□□□ 1.35
LETMD1-216ENST00000548401 HOXC9P31274 260 aa23.46■■□□□ 1.35
LETMD1-216ENST00000548401 IP6K1Q92551 441 aa23.46■■□□□ 1.35
LETMD1-216ENST00000548401 BTG4Q9NY30 223 aa23.46■■□□□ 1.35
LETMD1-216ENST00000548401 COL3A1P02461 1466 aaPredicted RBP23.45■■□□□ 1.34
LETMD1-216ENST00000548401 RGS17Q9UGC6 210 aaPredicted RBP23.44■■□□□ 1.34
LETMD1-216ENST00000548401 INSRP06213 1382 aa23.43■■□□□ 1.34
LETMD1-216ENST00000548401 ERBB3P21860 1342 aa23.43■■□□□ 1.34
LETMD1-216ENST00000548401 AMPHP49418 695 aa23.42■■□□□ 1.34
LETMD1-216ENST00000548401 UNC5CLQ8IV45 518 aa23.42■■□□□ 1.34
LETMD1-216ENST00000548401 USP21Q9UK80 565 aa23.42■■□□□ 1.34
LETMD1-216ENST00000548401 GLI3P10071 1580 aa23.42■■□□□ 1.34
LETMD1-216ENST00000548401 WNK3Q9BYP7 1800 aa23.42■■□□□ 1.34
LETMD1-216ENST00000548401 RGPD2P0DJD1 1756 aa23.42■■□□□ 1.34
LETMD1-216ENST00000548401 PPP2R1AP30153 589 aa23.41■■□□□ 1.34
LETMD1-216ENST00000548401 RALBP1Q15311 655 aa23.41■■□□□ 1.34
LETMD1-216ENST00000548401 PRKRIP1Q9H875 184 aaPredicted RBP23.41■■□□□ 1.34
LETMD1-216ENST00000548401 RGPD1P0DJD0 1748 aa23.4■■□□□ 1.34
LETMD1-216ENST00000548401 WDR17Q8IZU2 1322 aa23.39■■□□□ 1.34
LETMD1-216ENST00000548401 HSP90AB2PQ58FF8 381 aa23.39■■□□□ 1.33
LETMD1-216ENST00000548401 MTHFSP49914 203 aa23.38■■□□□ 1.33
LETMD1-216ENST00000548401 ZNF772Q68DY9 489 aaPredicted RBP23.38■■□□□ 1.33
LETMD1-216ENST00000548401 CRB1P82279 1406 aa23.38■■□□□ 1.33
LETMD1-216ENST00000548401 NCAPD2Q15021 1401 aa23.37■■□□□ 1.33
LETMD1-216ENST00000548401 PPM1GO15355 546 aaPredicted RBP23.37■■□□□ 1.33
LETMD1-216ENST00000548401 VPS72Q15906 364 aa23.37■■□□□ 1.33
LETMD1-216ENST00000548401 PHF23Q9BUL5 403 aaPredicted RBP23.37■■□□□ 1.33
LETMD1-216ENST00000548401 LARP1Q6PKG0 1096 aaKnown RBP23.36■■□□□ 1.33
LETMD1-216ENST00000548401 ANKRD24Q8TF21 1146 aa23.36■■□□□ 1.33
LETMD1-216ENST00000548401 STRN4Q9NRL3 753 aa23.36■■□□□ 1.33
LETMD1-216ENST00000548401 MYBBP1AQ9BQG0 1328 aaKnown RBP23.35■■□□□ 1.33
LETMD1-216ENST00000548401 THSD7AQ9UPZ6 1657 aa23.35■■□□□ 1.33
LETMD1-216ENST00000548401 TRPC5Q9UL62 973 aaPredicted RBP23.34■■□□□ 1.33
LETMD1-216ENST00000548401 SPATA31A5Q5VU36 1347 aa23.33■■□□□ 1.33
LETMD1-216ENST00000548401 SPATA31A7Q8IWB4 1347 aa23.33■■□□□ 1.33
LETMD1-216ENST00000548401 EIF4A2Q14240 407 aaKnown RBP23.32■■□□□ 1.32
LETMD1-216ENST00000548401 POTEAQ6S8J7 498 aa23.32■■□□□ 1.32
LETMD1-216ENST00000548401 SPATA31A1Q5TZJ5 1347 aa23.32■■□□□ 1.32
LETMD1-216ENST00000548401 EVA1CP58658 441 aa23.31■■□□□ 1.32
LETMD1-216ENST00000548401 LTV1Q96GA3 475 aaPredicted RBP23.31■■□□□ 1.32
LETMD1-216ENST00000548401 DISP2A7MBM2 1401 aa23.3■■□□□ 1.32
LETMD1-216ENST00000548401 CSB-PGBD3P0DP91 1061 aa23.29■■□□□ 1.32
LETMD1-216ENST00000548401 QTRT2Q9H974 415 aaKnown RBP23.29■■□□□ 1.32
LETMD1-216ENST00000548401 PARP4Q9UKK3 1724 aaKnown RBP23.28■■□□□ 1.32
LETMD1-216ENST00000548401 ANP32CO43423 234 aa23.28■■□□□ 1.32
LETMD1-216ENST00000548401 IL13P35225 146 aa23.28■■□□□ 1.32
LETMD1-216ENST00000548401 TOM1L2Q6ZVM7 507 aa23.28■■□□□ 1.32
LETMD1-216ENST00000548401 GJD4Q96KN9 370 aaPredicted RBP23.28■■□□□ 1.32
LETMD1-216ENST00000548401 CARD10Q9BWT7 1032 aa23.28■■□□□ 1.32
LETMD1-216ENST00000548401 LRRC37A3O60309 1634 aa23.28■■□□□ 1.32
LETMD1-216ENST00000548401 IGSF1Q8N6C5 1336 aa23.27■■□□□ 1.32
LETMD1-216ENST00000548401 NBPF6Q5VWK0 638 aa23.26■■□□□ 1.31
LETMD1-216ENST00000548401 NBPF4Q96M43 638 aa23.26■■□□□ 1.31
LETMD1-216ENST00000548401 NLRP2Q9NX02 1062 aa23.26■■□□□ 1.31
LETMD1-216ENST00000548401 RGS12O14924 1447 aa23.25■■□□□ 1.31
LETMD1-216ENST00000548401 CCDC9Q9Y3X0 531 aaKnown RBP23.25■■□□□ 1.31
LETMD1-216ENST00000548401 MEGF6O75095 1541 aa23.24■■□□□ 1.31
LETMD1-216ENST00000548401 RBM6P78332 1123 aaKnown RBP23.24■■□□□ 1.31
LETMD1-216ENST00000548401 DIEXFQ68CQ4 756 aaKnown RBP23.24■■□□□ 1.31
LETMD1-216ENST00000548401 TCP11L2Q8N4U5 519 aa23.24■■□□□ 1.31
LETMD1-216ENST00000548401 CFAP53Q96M91 514 aa23.24■■□□□ 1.31
LETMD1-216ENST00000548401 EYA1Q99502 592 aa23.24■■□□□ 1.31
LETMD1-216ENST00000548401 SHANK3Q9BYB0 1731 aa23.23■■□□□ 1.31
LETMD1-216ENST00000548401 DIAPH1O60610 1272 aaKnown RBP23.23■■□□□ 1.31
LETMD1-216ENST00000548401 USP35Q9P2H5 1018 aa23.23■■□□□ 1.31
LETMD1-216ENST00000548401 THRAP3Q9Y2W1 955 aaKnown RBP23.23■■□□□ 1.31
LETMD1-216ENST00000548401 KDRP35968 1356 aa23.23■■□□□ 1.31
LETMD1-216ENST00000548401 PKD1L3Q7Z443 1732 aa23.22■■□□□ 1.31
LETMD1-216ENST00000548401 BARGINQ6ZT62 677 aa23.22■■□□□ 1.31
LETMD1-216ENST00000548401 USHBP1Q8N6Y0 703 aa23.22■■□□□ 1.31
LETMD1-216ENST00000548401 BRWD3Q6RI45 1802 aa23.21■■□□□ 1.31
LETMD1-216ENST00000548401 RXRBP28702 533 aa23.2■■□□□ 1.3
LETMD1-216ENST00000548401 OVOS2A0A0G2JMS6 1433 aa23.19■■□□□ 1.3
LETMD1-216ENST00000548401 ONECUT3O60422 494 aaPredicted RBP23.19■■□□□ 1.3
LETMD1-216ENST00000548401 FAM98CQ17RN3 349 aaKnown RBP23.19■■□□□ 1.3
LETMD1-216ENST00000548401 TNS2Q63HR2 1409 aa23.18■■□□□ 1.3
LETMD1-216ENST00000548401 CCDC184Q52MB2 194 aa23.17■■□□□ 1.3
LETMD1-216ENST00000548401 PLEKHG2Q9H7P9 1386 aa23.16■■□□□ 1.3
LETMD1-216ENST00000548401 AEBP1Q8IUX7 1158 aa23.16■■□□□ 1.3
LETMD1-216ENST00000548401 IL2RBP14784 551 aa23.14■■□□□ 1.29
LETMD1-216ENST00000548401 CDCA7Q9BWT1 371 aaPredicted RBP23.13■■□□□ 1.29
LETMD1-216ENST00000548401 U2SURPO15042 1029 aaKnown RBP23.12■■□□□ 1.29
LETMD1-216ENST00000548401 SULT6B1Q6IMI4 303 aa23.12■■□□□ 1.29
LETMD1-216ENST00000548401 SEPT12Q8IYM1 358 aa23.12■■□□□ 1.29
LETMD1-216ENST00000548401 NUDCQ9Y266 331 aa23.11■■□□□ 1.29
LETMD1-216ENST00000548401 HMOX1P09601 288 aa23.1■■□□□ 1.29
LETMD1-216ENST00000548401 RAPGEF4Q8WZA2 1011 aa23.09■■□□□ 1.29
LETMD1-216ENST00000548401 RSPH6AQ9H0K4 717 aa23.09■■□□□ 1.29
LETMD1-216ENST00000548401 U2AF1L5P0DN76 240 aaPredicted RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms