RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 USP54Q70EL1 1684 aa30.32■■■□□ 2.44
USP44-204ENST00000547951 KCNH5Q8NCM2 988 aa30.31■■■□□ 2.44
USP44-204ENST00000547951 WNK3Q9BYP7 1800 aa30.31■■■□□ 2.44
USP44-204ENST00000547951 DISP2A7MBM2 1401 aa30.3■■■□□ 2.44
USP44-204ENST00000547951 LRRC37A3O60309 1634 aa30.3■■■□□ 2.44
USP44-204ENST00000547951 TOM1L2Q6ZVM7 507 aa30.3■■■□□ 2.44
USP44-204ENST00000547951 A0A1W2PP64 1363 aa30.29■■■□□ 2.44
USP44-204ENST00000547951 WDR17Q8IZU2 1322 aa30.29■■■□□ 2.44
USP44-204ENST00000547951 PSDA5PKW4 1024 aaPredicted RBP30.29■■■□□ 2.44
USP44-204ENST00000547951 USP31Q70CQ4 1352 aa30.28■■■□□ 2.44
USP44-204ENST00000547951 EZH2Q15910 746 aaKnown RBP30.27■■■□□ 2.44
USP44-204ENST00000547951 HDGFL2Q7Z4V5 671 aaPredicted RBP30.26■■■□□ 2.43
USP44-204ENST00000547951 PEAK1Q9H792 1746 aa30.26■■■□□ 2.43
USP44-204ENST00000547951 EDC4Q6P2E9 1401 aaKnown RBP30.25■■■□□ 2.43
USP44-204ENST00000547951 LTN1O94822 1766 aa30.24■■■□□ 2.43
USP44-204ENST00000547951 CAMKK2Q96RR4 588 aa30.24■■■□□ 2.43
USP44-204ENST00000547951 APBA3O96018 575 aa30.23■■■□□ 2.43
USP44-204ENST00000547951 PUS7Q96PZ0 661 aaKnown RBP30.22■■■□□ 2.43
USP44-204ENST00000547951 TERF2IPQ9NYB0 399 aa30.22■■■□□ 2.43
USP44-204ENST00000547951 CSB-PGBD3P0DP91 1061 aa30.21■■■□□ 2.43
USP44-204ENST00000547951 USP47Q96K76 1375 aa30.2■■■□□ 2.43
USP44-204ENST00000547951 ABCC6O95255 1503 aa30.19■■■□□ 2.42
USP44-204ENST00000547951 CARD10Q9BWT7 1032 aa30.19■■■□□ 2.42
USP44-204ENST00000547951 OVOS2A0A0J9YW53 1432 aa30.19■■■□□ 2.42
USP44-204ENST00000547951 OVOS2Q6IE36 1432 aa30.19■■■□□ 2.42
USP44-204ENST00000547951 SBF2Q86WG5 1849 aa30.19■■■□□ 2.42
USP44-204ENST00000547951 RREB1Q92766 1687 aa30.18■■■□□ 2.42
USP44-204ENST00000547951 DDB1Q16531 1140 aa30.18■■■□□ 2.42
USP44-204ENST00000547951 OVOS2A0A0G2JMS6 1433 aa30.16■■■□□ 2.42
USP44-204ENST00000547951 R3HDM1Q15032 1099 aaKnown RBP30.16■■■□□ 2.42
USP44-204ENST00000547951 PCGF6Q9BYE7 350 aa30.16■■■□□ 2.42
USP44-204ENST00000547951 PTF1AQ7RTS3 328 aa30.15■■■□□ 2.42
USP44-204ENST00000547951 NUP188Q5SRE5 1749 aa30.15■■■□□ 2.42
USP44-204ENST00000547951 MARCH10Q8NA82 808 aaPredicted RBP30.14■■■□□ 2.42
USP44-204ENST00000547951 LRP5O75197 1615 aa30.13■■■□□ 2.41
USP44-204ENST00000547951 NINLQ9Y2I6 1382 aa30.13■■■□□ 2.41
USP44-204ENST00000547951 ERBB3P21860 1342 aa30.12■■■□□ 2.41
USP44-204ENST00000547951 PARD3Q8TEW0 1356 aa30.1■■■□□ 2.41
USP44-204ENST00000547951 FBLN1P23142 703 aa30.09■■■□□ 2.41
USP44-204ENST00000547951 CCDC7Q96M83 1385 aa30.09■■■□□ 2.41
USP44-204ENST00000547951 CDCA7Q9BWT1 371 aaPredicted RBP30.08■■■□□ 2.41
USP44-204ENST00000547951 ANKRD36BQ8N2N9 1353 aa30.07■■■□□ 2.4
USP44-204ENST00000547951 TMF1P82094 1093 aa30.07■■■□□ 2.4
USP44-204ENST00000547951 ANKRD24Q8TF21 1146 aa30.07■■■□□ 2.4
USP44-204ENST00000547951 NLRP2Q9NX02 1062 aa30.07■■■□□ 2.4
USP44-204ENST00000547951 TNS2Q63HR2 1409 aa30.04■■■□□ 2.4
USP44-204ENST00000547951 SLC24A1O60721 1099 aa30.03■■■□□ 2.4
USP44-204ENST00000547951 C11orf95C9JLR9 678 aaPredicted RBP30.02■■■□□ 2.4
USP44-204ENST00000547951 EXOC5O00471 708 aa30.02■■■□□ 2.4
USP44-204ENST00000547951 COG3Q96JB2 828 aa30.02■■■□□ 2.4
USP44-204ENST00000547951 MYOM1P52179 1685 aa30.01■■■□□ 2.4
USP44-204ENST00000547951 IP6K1Q92551 441 aa30.01■■■□□ 2.39
USP44-204ENST00000547951 BCL11BQ9C0K0 894 aaPredicted RBP30.01■■■□□ 2.39
USP44-204ENST00000547951 BCL9O00512 1426 aa30.01■■■□□ 2.39
USP44-204ENST00000547951 RGPD3A6NKT7 1758 aaPredicted RBP30■■■□□ 2.39
USP44-204ENST00000547951 RGPD4Q7Z3J3 1758 aa30■■■□□ 2.39
USP44-204ENST00000547951 MAP3K19Q56UN5 1328 aa30■■■□□ 2.39
USP44-204ENST00000547951 LTV1Q96GA3 475 aaPredicted RBP30■■■□□ 2.39
USP44-204ENST00000547951 CLSPNQ9HAW4 1339 aa29.98■■■□□ 2.39
USP44-204ENST00000547951 GGNBP2Q9H3C7 697 aa29.98■■■□□ 2.39
USP44-204ENST00000547951 TIMELESSQ9UNS1 1208 aa29.98■■■□□ 2.39
USP44-204ENST00000547951 RGPD2P0DJD1 1756 aa29.98■■■□□ 2.39
USP44-204ENST00000547951 FYB1O15117 783 aa29.97■■■□□ 2.39
USP44-204ENST00000547951 IL2RBP14784 551 aa29.96■■■□□ 2.39
USP44-204ENST00000547951 KIF20BQ96Q89 1820 aa29.95■■■□□ 2.39
USP44-204ENST00000547951 KCNQ2O43526 872 aa29.95■■■□□ 2.39
USP44-204ENST00000547951 FAM208AQ9UK61 1670 aaKnown RBP29.95■■■□□ 2.38
USP44-204ENST00000547951 PLSCR1O15162 318 aa29.94■■■□□ 2.38
USP44-204ENST00000547951 HOXC9P31274 260 aa29.94■■■□□ 2.38
USP44-204ENST00000547951 PROM2Q8N271 834 aa29.94■■■□□ 2.38
USP44-204ENST00000547951 RRS1Q15050 365 aaKnown RBP29.93■■■□□ 2.38
USP44-204ENST00000547951 NHSQ6T4R5 1651 aa29.92■■■□□ 2.38
USP44-204ENST00000547951 NBPF14Q5TI25 921 aa29.92■■■□□ 2.38
USP44-204ENST00000547951 CARD14Q9BXL6 1004 aa29.92■■■□□ 2.38
USP44-204ENST00000547951 ANO8Q9HCE9 1232 aaPredicted RBP29.92■■■□□ 2.38
USP44-204ENST00000547951 AMPHP49418 695 aa29.91■■■□□ 2.38
USP44-204ENST00000547951 ACSBG1Q96GR2 724 aa29.91■■■□□ 2.38
USP44-204ENST00000547951 CDCA8Q53HL2 280 aa29.89■■■□□ 2.38
USP44-204ENST00000547951 NSD3Q9BZ95 1437 aa29.87■■■□□ 2.37
USP44-204ENST00000547951 KAT6BQ8WYB5 2073 aa29.86■■■□□ 2.37
USP44-204ENST00000547951 BTAF1O14981 1849 aa29.85■■■□□ 2.37
USP44-204ENST00000547951 CCER1Q8TC90 406 aaPredicted RBP29.84■■■□□ 2.37
USP44-204ENST00000547951 RTL1A6NKG5 1358 aa29.84■■■□□ 2.37
USP44-204ENST00000547951 SHANK3Q9BYB0 1731 aa29.84■■■□□ 2.37
USP44-204ENST00000547951 TXNRD1Q16881 649 aa29.83■■■□□ 2.37
USP44-204ENST00000547951 MEGF6O75095 1541 aa29.82■■■□□ 2.36
USP44-204ENST00000547951 DDX54Q8TDD1 881 aaKnown RBP29.82■■■□□ 2.36
USP44-204ENST00000547951 PDGFDQ9GZP0 370 aaPredicted RBP29.82■■■□□ 2.36
USP44-204ENST00000547951 USHBP1Q8N6Y0 703 aa29.81■■■□□ 2.36
USP44-204ENST00000547951 CASZ1Q86V15 1759 aa29.81■■■□□ 2.36
USP44-204ENST00000547951 NBPF6Q5VWK0 638 aa29.8■■■□□ 2.36
USP44-204ENST00000547951 NBPF4Q96M43 638 aa29.8■■■□□ 2.36
USP44-204ENST00000547951 HSP90AB2PQ58FF8 381 aa29.79■■■□□ 2.36
USP44-204ENST00000547951 POLR3GLQ9BT43 218 aa29.78■■■□□ 2.36
USP44-204ENST00000547951 HSPA5P11021 654 aaKnown RBP29.76■■■□□ 2.35
USP44-204ENST00000547951 DOT1LQ8TEK3 1739 aa29.75■■■□□ 2.35
USP44-204ENST00000547951 EMILIN1Q9Y6C2 1016 aa29.75■■■□□ 2.35
USP44-204ENST00000547951 INSRP06213 1382 aa29.74■■■□□ 2.35
USP44-204ENST00000547951 FLT4P35916 1363 aa29.73■■■□□ 2.35
USP44-204ENST00000547951 PAPPAQ13219 1627 aa29.72■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms