RNA–Protein interactions for RNA: ENST00000547878.6

TMEM116-205, Transcript of transmembrane protein 116, humanhuman

TSL 2

Gene TMEM116, Length 1,716 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-205ENST00000547878 UTRNP46939 3433 aa11.41□□□□□ -0.58
TMEM116-205ENST00000547878 RTL5Q5HYW3 569 aaPredicted RBP11.41□□□□□ -0.58
TMEM116-205ENST00000547878 ADGRB2O60241 1585 aa11.41□□□□□ -0.58
TMEM116-205ENST00000547878 APBA3O96018 575 aa11.4□□□□□ -0.58
TMEM116-205ENST00000547878 RRP1P56182 461 aaKnown RBP11.4□□□□□ -0.58
TMEM116-205ENST00000547878 VSIG10Q8N0Z9 540 aa11.4□□□□□ -0.58
TMEM116-205ENST00000547878 PMFBP1Q8TBY8 1022 aa11.4□□□□□ -0.58
TMEM116-205ENST00000547878 TRPM3Q9HCF6 1732 aaPredicted RBP11.4□□□□□ -0.58
TMEM116-205ENST00000547878 RBM10P98175 930 aaKnown RBP11.4□□□□□ -0.58
TMEM116-205ENST00000547878 YTHDC2Q9H6S0 1430 aaKnown RBP11.39□□□□□ -0.59
TMEM116-205ENST00000547878 NOP58Q9Y2X3 529 aaKnown RBP11.39□□□□□ -0.59
TMEM116-205ENST00000547878 ALS2Q96Q42 1657 aa11.39□□□□□ -0.59
TMEM116-205ENST00000547878 CRYBG1Q9Y4K1 1723 aa11.39□□□□□ -0.59
TMEM116-205ENST00000547878 TMF1P82094 1093 aa11.38□□□□□ -0.59
TMEM116-205ENST00000547878 NBPF1Q3BBV0 1214 aa11.38□□□□□ -0.59
TMEM116-205ENST00000547878 USP35Q9P2H5 1018 aa11.38□□□□□ -0.59
TMEM116-205ENST00000547878 SAFB2Q14151 953 aaKnown RBP eCLIP11.38□□□□□ -0.59
TMEM116-205ENST00000547878 RGL3Q3MIN7 710 aa11.38□□□□□ -0.59
TMEM116-205ENST00000547878 MYOM1P52179 1685 aa11.37□□□□□ -0.59
TMEM116-205ENST00000547878 NPC1L1Q9UHC9 1359 aa11.37□□□□□ -0.59
TMEM116-205ENST00000547878 PIK3C2GO75747 1445 aa11.37□□□□□ -0.59
TMEM116-205ENST00000547878 FAM196AQ6ZSG2 479 aa11.37□□□□□ -0.59
TMEM116-205ENST00000547878 PPP1R1BQ9UD71 204 aaPredicted RBP11.37□□□□□ -0.59
TMEM116-205ENST00000547878 RCAN3Q9UKA8 241 aa11.37□□□□□ -0.59
TMEM116-205ENST00000547878 SPATA31A1Q5TZJ5 1347 aa11.37□□□□□ -0.59
TMEM116-205ENST00000547878 NINLQ9Y2I6 1382 aa11.36□□□□□ -0.59
TMEM116-205ENST00000547878 KCNQ2O43526 872 aa11.36□□□□□ -0.59
TMEM116-205ENST00000547878 ZNF784Q8NCA9 323 aaPredicted RBP11.36□□□□□ -0.59
TMEM116-205ENST00000547878 SPON1Q9HCB6 807 aa11.36□□□□□ -0.59
TMEM116-205ENST00000547878 SENP3-EIF4A1A0A087X0R7 540 aa11.34□□□□□ -0.59
TMEM116-205ENST00000547878 CHRNA2Q15822 529 aa11.34□□□□□ -0.59
TMEM116-205ENST00000547878 SIRT1Q96EB6 747 aa11.34□□□□□ -0.59
TMEM116-205ENST00000547878 PRAM1Q96QH2 718 aa11.34□□□□□ -0.59
TMEM116-205ENST00000547878 BCL11BQ9C0K0 894 aaPredicted RBP11.34□□□□□ -0.59
TMEM116-205ENST00000547878 RRP9O43818 475 aaKnown RBP11.33□□□□□ -0.6
TMEM116-205ENST00000547878 IFFO2Q5TF58 517 aa11.33□□□□□ -0.6
TMEM116-205ENST00000547878 NBPF14Q5TI25 921 aa11.33□□□□□ -0.6
TMEM116-205ENST00000547878 PRDM11Q9NQV5 511 aa11.33□□□□□ -0.6
TMEM116-205ENST00000547878 STRN4Q9NRL3 753 aa11.33□□□□□ -0.6
TMEM116-205ENST00000547878 EIF3AQ14152 1382 aaKnown RBP11.33□□□□□ -0.6
TMEM116-205ENST00000547878 KCNA4P22459 653 aa11.32□□□□□ -0.6
TMEM116-205ENST00000547878 CDCA8Q53HL2 280 aa11.32□□□□□ -0.6
TMEM116-205ENST00000547878 PDGFDQ9GZP0 370 aaPredicted RBP11.32□□□□□ -0.6
TMEM116-205ENST00000547878 PRR36Q9H6K5 1346 aa11.32□□□□□ -0.6
TMEM116-205ENST00000547878 KIAA0232Q92628 1395 aa11.32□□□□□ -0.6
TMEM116-205ENST00000547878 ANKARQ7Z5J8 1434 aa11.32□□□□□ -0.6
TMEM116-205ENST00000547878 NRKQ7Z2Y5 1582 aa11.32□□□□□ -0.6
TMEM116-205ENST00000547878 TCERG1O14776 1098 aaKnown RBP11.32□□□□□ -0.6
TMEM116-205ENST00000547878 MS4A1P11836 297 aa11.32□□□□□ -0.6
TMEM116-205ENST00000547878 ANP32AP39687 249 aaKnown RBP11.32□□□□□ -0.6
TMEM116-205ENST00000547878 PANK3Q9H999 370 aa11.32□□□□□ -0.6
TMEM116-205ENST00000547878 DCAF8L1A6NGE4 600 aa11.31□□□□□ -0.6
TMEM116-205ENST00000547878 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
TMEM116-205ENST00000547878 CFAP70Q5T0N1 1121 aa11.31□□□□□ -0.6
TMEM116-205ENST00000547878 CASZ1Q86V15 1759 aa11.31□□□□□ -0.6
TMEM116-205ENST00000547878 FAM43AQ8N2R8 423 aa11.31□□□□□ -0.6
TMEM116-205ENST00000547878 CEP350Q5VT06 3117 aa11.31□□□□□ -0.6
TMEM116-205ENST00000547878 IPO9Q96P70 1041 aaKnown RBP11.3□□□□□ -0.6
TMEM116-205ENST00000547878 C14orf93Q9H972 538 aaKnown RBP11.3□□□□□ -0.6
TMEM116-205ENST00000547878 PHRF1Q9P1Y6 1649 aaKnown RBP11.3□□□□□ -0.6
TMEM116-205ENST00000547878 SBNO2Q9Y2G9 1366 aa11.29□□□□□ -0.6
TMEM116-205ENST00000547878 PAK3O75914 559 aaPredicted RBP11.29□□□□□ -0.6
TMEM116-205ENST00000547878 C1QTNF8P60827 252 aa11.29□□□□□ -0.6
TMEM116-205ENST00000547878 ZC3H6P61129 1189 aaKnown RBP11.29□□□□□ -0.6
TMEM116-205ENST00000547878 AMER1Q5JTC6 1135 aaPredicted RBP11.29□□□□□ -0.6
TMEM116-205ENST00000547878 SSH2Q76I76 1423 aa11.28□□□□□ -0.6
TMEM116-205ENST00000547878 ZNF521Q96K83 1311 aa11.28□□□□□ -0.6
TMEM116-205ENST00000547878 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
TMEM116-205ENST00000547878 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
TMEM116-205ENST00000547878 EXOC6Q8TAG9 804 aa11.28□□□□□ -0.6
TMEM116-205ENST00000547878 A0A0U1RQG5 324 aaPredicted RBP11.27□□□□□ -0.61
TMEM116-205ENST00000547878 ZBTB7AO95365 584 aa11.27□□□□□ -0.61
TMEM116-205ENST00000547878 PTGER2P43116 358 aa11.27□□□□□ -0.61
TMEM116-205ENST00000547878 CC2D1BQ5T0F9 858 aaKnown RBP11.27□□□□□ -0.61
TMEM116-205ENST00000547878 LARP1Q6PKG0 1096 aaKnown RBP11.27□□□□□ -0.61
TMEM116-205ENST00000547878 PTF1AQ7RTS3 328 aa11.27□□□□□ -0.61
TMEM116-205ENST00000547878 DLC1Q96QB1 1528 aa11.27□□□□□ -0.61
TMEM116-205ENST00000547878 NUTM2GQ5VZR2 741 aa11.26□□□□□ -0.61
TMEM116-205ENST00000547878 POGKQ9P215 609 aa11.26□□□□□ -0.61
TMEM116-205ENST00000547878 TULP4Q9NRJ4 1543 aa11.26□□□□□ -0.61
TMEM116-205ENST00000547878 MINK1Q8N4C8 1332 aaPredicted RBP11.26□□□□□ -0.61
TMEM116-205ENST00000547878 PEAK1Q9H792 1746 aa11.25□□□□□ -0.61
TMEM116-205ENST00000547878 PPP2R1AP30153 589 aa11.25□□□□□ -0.61
TMEM116-205ENST00000547878 NGDNQ8NEJ9 315 aaKnown RBP11.25□□□□□ -0.61
TMEM116-205ENST00000547878 CDCA7LQ96GN5 454 aa11.25□□□□□ -0.61
TMEM116-205ENST00000547878 KNSTRNQ9Y448 316 aa11.25□□□□□ -0.61
TMEM116-205ENST00000547878 EVA1CP58658 441 aa11.24□□□□□ -0.61
TMEM116-205ENST00000547878 PROM2Q8N271 834 aa11.24□□□□□ -0.61
TMEM116-205ENST00000547878 TCP11L2Q8N4U5 519 aa11.24□□□□□ -0.61
TMEM116-205ENST00000547878 ATF5Q9Y2D1 282 aaPredicted RBP11.24□□□□□ -0.61
TMEM116-205ENST00000547878 LMO7Q8WWI1 1683 aa11.24□□□□□ -0.61
TMEM116-205ENST00000547878 PARP4Q9UKK3 1724 aaKnown RBP11.24□□□□□ -0.61
TMEM116-205ENST00000547878 ADGRB1O14514 1584 aa11.24□□□□□ -0.61
TMEM116-205ENST00000547878 NBR1Q14596 966 aa11.23□□□□□ -0.61
TMEM116-205ENST00000547878 NGEFQ8N5V2 710 aa11.23□□□□□ -0.61
TMEM116-205ENST00000547878 SYT17Q9BSW7 474 aa11.23□□□□□ -0.61
TMEM116-205ENST00000547878 FHDC1Q9C0D6 1143 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-205ENST00000547878 TRAK1Q9UPV9 953 aa11.23□□□□□ -0.61
TMEM116-205ENST00000547878 RGPD3A6NKT7 1758 aaPredicted RBP11.23□□□□□ -0.61
TMEM116-205ENST00000547878 RGPD4Q7Z3J3 1758 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms