RNA–Protein interactions for RNA: ENST00000547693.5

CACNB3-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 477 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-206ENST00000547693 U2AF1L5P0DN76 240 aaPredicted RBP13.86□□□□□ -0.19
CACNB3-206ENST00000547693 U2AF1Q01081 240 aaKnown RBP eCLIP13.86□□□□□ -0.19
CACNB3-206ENST00000547693 IP6K1Q92551 441 aa13.86□□□□□ -0.19
CACNB3-206ENST00000547693 SLIT3O75094 1523 aa13.85□□□□□ -0.19
CACNB3-206ENST00000547693 RTL1A6NKG5 1358 aa13.85□□□□□ -0.19
CACNB3-206ENST00000547693 ZBTB7CA1YPR0 619 aa13.85□□□□□ -0.19
CACNB3-206ENST00000547693 HNRNPUQ00839 825 aaKnown RBP eCLIP13.85□□□□□ -0.19
CACNB3-206ENST00000547693 ARHGEF25Q86VW2 580 aa13.85□□□□□ -0.19
CACNB3-206ENST00000547693 HOXC9P31274 260 aa13.84□□□□□ -0.19
CACNB3-206ENST00000547693 NGEFQ8N5V2 710 aa13.84□□□□□ -0.19
CACNB3-206ENST00000547693 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
CACNB3-206ENST00000547693 FCHSD2O94868 740 aa13.83□□□□□ -0.2
CACNB3-206ENST00000547693 CENPBP07199 599 aaPredicted RBP13.83□□□□□ -0.2
CACNB3-206ENST00000547693 IL13P35225 146 aa13.83□□□□□ -0.2
CACNB3-206ENST00000547693 ZC3H6P61129 1189 aaKnown RBP13.83□□□□□ -0.2
CACNB3-206ENST00000547693 HSP90AB2PQ58FF8 381 aa13.83□□□□□ -0.2
CACNB3-206ENST00000547693 CABLES1Q8TDN4 633 aa13.82□□□□□ -0.2
CACNB3-206ENST00000547693 RUNDC1Q96C34 613 aa13.82□□□□□ -0.2
CACNB3-206ENST00000547693 LTN1O94822 1766 aa13.81□□□□□ -0.2
CACNB3-206ENST00000547693 NFAT5O94916 1531 aa13.81□□□□□ -0.2
CACNB3-206ENST00000547693 EIF4A2Q14240 407 aaKnown RBP13.81□□□□□ -0.2
CACNB3-206ENST00000547693 CPDO75976 1380 aa13.81□□□□□ -0.2
CACNB3-206ENST00000547693 COL3A1P02461 1466 aaPredicted RBP13.8□□□□□ -0.2
CACNB3-206ENST00000547693 EP400Q96L91 3159 aa13.8□□□□□ -0.2
CACNB3-206ENST00000547693 BLMP54132 1417 aaPredicted RBP13.8□□□□□ -0.2
CACNB3-206ENST00000547693 PRDM11Q9NQV5 511 aa13.79□□□□□ -0.2
CACNB3-206ENST00000547693 MAPK8IP3Q9UPT6 1336 aa13.79□□□□□ -0.2
CACNB3-206ENST00000547693 PHRF1Q9P1Y6 1649 aaKnown RBP13.79□□□□□ -0.2
CACNB3-206ENST00000547693 RXRBP28702 533 aa13.78□□□□□ -0.2
CACNB3-206ENST00000547693 LTV1Q96GA3 475 aaPredicted RBP13.78□□□□□ -0.2
CACNB3-206ENST00000547693 RGS12O14924 1447 aa13.77□□□□□ -0.21
CACNB3-206ENST00000547693 ABCC6O95255 1503 aa13.77□□□□□ -0.21
CACNB3-206ENST00000547693 NCBP3Q53F19 620 aaKnown RBP13.77□□□□□ -0.21
CACNB3-206ENST00000547693 KIAA0232Q92628 1395 aa13.77□□□□□ -0.21
CACNB3-206ENST00000547693 PEAK1Q9H792 1746 aa13.77□□□□□ -0.21
CACNB3-206ENST00000547693 ZBED9Q6R2W3 1325 aa13.76□□□□□ -0.21
CACNB3-206ENST00000547693 SULT6B1Q6IMI4 303 aa13.76□□□□□ -0.21
CACNB3-206ENST00000547693 CCDC146Q8IYE0 955 aa13.76□□□□□ -0.21
CACNB3-206ENST00000547693 ANKRD24Q8TF21 1146 aa13.76□□□□□ -0.21
CACNB3-206ENST00000547693 COL22A1Q8NFW1 1626 aaPredicted RBP13.75□□□□□ -0.21
CACNB3-206ENST00000547693 APAF1O14727 1248 aa13.75□□□□□ -0.21
CACNB3-206ENST00000547693 HMOX1P09601 288 aa13.75□□□□□ -0.21
CACNB3-206ENST00000547693 CSB-PGBD3P0DP91 1061 aa13.75□□□□□ -0.21
CACNB3-206ENST00000547693 EVA1CP58658 441 aa13.75□□□□□ -0.21
CACNB3-206ENST00000547693 EYA1Q99502 592 aa13.75□□□□□ -0.21
CACNB3-206ENST00000547693 RSPH6AQ9H0K4 717 aa13.75□□□□□ -0.21
CACNB3-206ENST00000547693 CRYBG1Q9Y4K1 1723 aa13.75□□□□□ -0.21
CACNB3-206ENST00000547693 PRKAR2BP31323 418 aa13.74□□□□□ -0.21
CACNB3-206ENST00000547693 PDE3BQ13370 1112 aa13.74□□□□□ -0.21
CACNB3-206ENST00000547693 CHRNA2Q15822 529 aa13.74□□□□□ -0.21
CACNB3-206ENST00000547693 TCP11L2Q8N4U5 519 aa13.74□□□□□ -0.21
CACNB3-206ENST00000547693 IGSF1Q8N6C5 1336 aa13.73□□□□□ -0.21
CACNB3-206ENST00000547693 PLEKHF1Q96S99 279 aa13.73□□□□□ -0.21
CACNB3-206ENST00000547693 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
CACNB3-206ENST00000547693 MEX3CQ5U5Q3 659 aaKnown RBP13.72□□□□□ -0.21
CACNB3-206ENST00000547693 ERBB3P21860 1342 aa13.71□□□□□ -0.21
CACNB3-206ENST00000547693 FAM83GA6ND36 823 aa13.71□□□□□ -0.21
CACNB3-206ENST00000547693 NUTM2BA6NNL0 878 aaPredicted RBP13.71□□□□□ -0.21
CACNB3-206ENST00000547693 NUTM2EB1AL46 878 aaPredicted RBP13.71□□□□□ -0.21
CACNB3-206ENST00000547693 LMOD3Q0VAK6 560 aa13.71□□□□□ -0.21
CACNB3-206ENST00000547693 CCDC27Q2M243 656 aa13.71□□□□□ -0.21
CACNB3-206ENST00000547693 NUTM2AQ8IVF1 878 aaPredicted RBP13.71□□□□□ -0.21
CACNB3-206ENST00000547693 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.21
CACNB3-206ENST00000547693 SALL2Q9Y467 1007 aaPredicted RBP13.71□□□□□ -0.21
CACNB3-206ENST00000547693 COL18A1P39060 1754 aa13.71□□□□□ -0.22
CACNB3-206ENST00000547693 ABCA3Q99758 1704 aa13.7□□□□□ -0.22
CACNB3-206ENST00000547693 TMPOP42166 694 aaKnown RBP13.7□□□□□ -0.22
CACNB3-206ENST00000547693 NFE2L2Q16236 605 aa13.7□□□□□ -0.22
CACNB3-206ENST00000547693 NBPF6Q5VWK0 638 aa13.7□□□□□ -0.22
CACNB3-206ENST00000547693 NBPF4Q96M43 638 aa13.7□□□□□ -0.22
CACNB3-206ENST00000547693 RGPD5Q99666 1765 aa13.7□□□□□ -0.22
CACNB3-206ENST00000547693 KDRP35968 1356 aa13.7□□□□□ -0.22
CACNB3-206ENST00000547693 ADAMTS2O95450 1211 aa13.69□□□□□ -0.22
CACNB3-206ENST00000547693 RIPK4P57078 832 aa13.69□□□□□ -0.22
CACNB3-206ENST00000547693 CALD1Q05682 793 aaKnown RBP13.69□□□□□ -0.22
CACNB3-206ENST00000547693 NEUROD2Q15784 382 aa13.69□□□□□ -0.22
CACNB3-206ENST00000547693 AMOTQ4VCS5 1084 aa13.69□□□□□ -0.22
CACNB3-206ENST00000547693 TOM1L2Q6ZVM7 507 aa13.69□□□□□ -0.22
CACNB3-206ENST00000547693 GAS2L2Q8NHY3 880 aa13.69□□□□□ -0.22
CACNB3-206ENST00000547693 RGPD1P0DJD0 1748 aa13.69□□□□□ -0.22
CACNB3-206ENST00000547693 FAM208AQ9UK61 1670 aaKnown RBP13.69□□□□□ -0.22
CACNB3-206ENST00000547693 COL14A1Q05707 1796 aaKnown RBP13.68□□□□□ -0.22
CACNB3-206ENST00000547693 LRP5O75197 1615 aa13.68□□□□□ -0.22
CACNB3-206ENST00000547693 WDR17Q8IZU2 1322 aa13.68□□□□□ -0.22
CACNB3-206ENST00000547693 PLEKHO1Q53GL0 409 aaPredicted RBP13.68□□□□□ -0.22
CACNB3-206ENST00000547693 AEBP1Q8IUX7 1158 aa13.68□□□□□ -0.22
CACNB3-206ENST00000547693 WDR63Q8IWG1 891 aa13.68□□□□□ -0.22
CACNB3-206ENST00000547693 RAPGEF4Q8WZA2 1011 aa13.68□□□□□ -0.22
CACNB3-206ENST00000547693 BTG4Q9NY30 223 aa13.68□□□□□ -0.22
CACNB3-206ENST00000547693 AFF2P51816 1311 aa13.67□□□□□ -0.22
CACNB3-206ENST00000547693 TATP17735 454 aaPredicted RBP13.67□□□□□ -0.22
CACNB3-206ENST00000547693 GOLGA2Q08379 1002 aa13.67□□□□□ -0.22
CACNB3-206ENST00000547693 PHACTR3Q96KR7 559 aa13.67□□□□□ -0.22
CACNB3-206ENST00000547693 CARD10Q9BWT7 1032 aa13.67□□□□□ -0.22
CACNB3-206ENST00000547693 STRN4Q9NRL3 753 aa13.67□□□□□ -0.22
CACNB3-206ENST00000547693 RBM6P78332 1123 aaKnown RBP13.66□□□□□ -0.22
CACNB3-206ENST00000547693 WWC1Q8IX03 1113 aa13.66□□□□□ -0.22
CACNB3-206ENST00000547693 USHBP1Q8N6Y0 703 aa13.66□□□□□ -0.22
CACNB3-206ENST00000547693 RTF1Q92541 710 aaKnown RBP13.66□□□□□ -0.22
CACNB3-206ENST00000547693 NGLY1Q96IV0 654 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms