RNA–Protein interactions for RNA: ENST00000547615.1

PTCH1-214, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 525 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-214ENST00000547615 NUTM2GQ5VZR2 741 aa11.95□□□□□ -0.5
PTCH1-214ENST00000547615 KCNH5Q8NCM2 988 aa11.95□□□□□ -0.5
PTCH1-214ENST00000547615 USP6P35125 1406 aa11.94□□□□□ -0.5
PTCH1-214ENST00000547615 CCDC7Q96M83 1385 aa11.94□□□□□ -0.5
PTCH1-214ENST00000547615 MYOM1P52179 1685 aa11.94□□□□□ -0.5
PTCH1-214ENST00000547615 MAP3K5Q99683 1374 aa11.93□□□□□ -0.5
PTCH1-214ENST00000547615 CENPJQ9HC77 1338 aaPredicted RBP11.93□□□□□ -0.5
PTCH1-214ENST00000547615 MTFR1LQ9H019 292 aa11.93□□□□□ -0.5
PTCH1-214ENST00000547615 CPSF1Q10570 1443 aaKnown RBP11.93□□□□□ -0.5
PTCH1-214ENST00000547615 NLRP6P59044 892 aa11.92□□□□□ -0.5
PTCH1-214ENST00000547615 TRPM1Q7Z4N2 1603 aa11.92□□□□□ -0.5
PTCH1-214ENST00000547615 TTC21AQ8NDW8 1320 aa11.91□□□□□ -0.5
PTCH1-214ENST00000547615 NHSQ6T4R5 1651 aa11.91□□□□□ -0.5
PTCH1-214ENST00000547615 SLC15A2Q16348 729 aa11.91□□□□□ -0.5
PTCH1-214ENST00000547615 ZNF784Q8NCA9 323 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-214ENST00000547615 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
PTCH1-214ENST00000547615 COL18A1P39060 1754 aa11.91□□□□□ -0.5
PTCH1-214ENST00000547615 TNS2Q63HR2 1409 aa11.91□□□□□ -0.5
PTCH1-214ENST00000547615 PIK3C2AO00443 1686 aa11.91□□□□□ -0.5
PTCH1-214ENST00000547615 EXOC5O00471 708 aa11.9□□□□□ -0.5
PTCH1-214ENST00000547615 HMGB2P26583 209 aaKnown RBP11.9□□□□□ -0.5
PTCH1-214ENST00000547615 CARD10Q9BWT7 1032 aa11.9□□□□□ -0.5
PTCH1-214ENST00000547615 EVC2Q86UK5 1308 aa11.89□□□□□ -0.51
PTCH1-214ENST00000547615 TXNRD1Q16881 649 aa11.89□□□□□ -0.51
PTCH1-214ENST00000547615 ANO8Q9HCE9 1232 aaPredicted RBP11.89□□□□□ -0.51
PTCH1-214ENST00000547615 ZBTB7CA1YPR0 619 aa11.88□□□□□ -0.51
PTCH1-214ENST00000547615 CSB-PGBD3P0DP91 1061 aa11.88□□□□□ -0.51
PTCH1-214ENST00000547615 PTGER2P43116 358 aa11.88□□□□□ -0.51
PTCH1-214ENST00000547615 SYT17Q9BSW7 474 aa11.88□□□□□ -0.51
PTCH1-214ENST00000547615 QSER1Q2KHR3 1735 aa11.88□□□□□ -0.51
PTCH1-214ENST00000547615 ZBTB7AO95365 584 aa11.87□□□□□ -0.51
PTCH1-214ENST00000547615 MARCH10Q8NA82 808 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-214ENST00000547615 SLC16A10Q8TF71 515 aa11.87□□□□□ -0.51
PTCH1-214ENST00000547615 FHDC1Q9C0D6 1143 aaPredicted RBP11.87□□□□□ -0.51
PTCH1-214ENST00000547615 PAPPAQ13219 1627 aa11.86□□□□□ -0.51
PTCH1-214ENST00000547615 SENP3-EIF4A1A0A087X0R7 540 aa11.86□□□□□ -0.51
PTCH1-214ENST00000547615 C1QTNF8P60827 252 aa11.86□□□□□ -0.51
PTCH1-214ENST00000547615 ARHGEF25Q86VW2 580 aa11.86□□□□□ -0.51
PTCH1-214ENST00000547615 USP54Q70EL1 1684 aa11.86□□□□□ -0.51
PTCH1-214ENST00000547615 POLD1P28340 1107 aa11.85□□□□□ -0.51
PTCH1-214ENST00000547615 ARXQ96QS3 562 aa11.85□□□□□ -0.51
PTCH1-214ENST00000547615 CABP1Q9NZU7 370 aa11.85□□□□□ -0.51
PTCH1-214ENST00000547615 FAM208AQ9UK61 1670 aaKnown RBP11.84□□□□□ -0.51
PTCH1-214ENST00000547615 CABP2Q9NPB3 220 aa11.84□□□□□ -0.51
PTCH1-214ENST00000547615 RGPD5Q99666 1765 aa11.83□□□□□ -0.52
PTCH1-214ENST00000547615 NFAT5O94916 1531 aa11.83□□□□□ -0.52
PTCH1-214ENST00000547615 GIGYF1O75420 1035 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-214ENST00000547615 SLC27A3Q5K4L6 730 aa11.83□□□□□ -0.52
PTCH1-214ENST00000547615 PROM2Q8N271 834 aa11.83□□□□□ -0.52
PTCH1-214ENST00000547615 SGIP1Q9BQI5 828 aa11.83□□□□□ -0.52
PTCH1-214ENST00000547615 ATF5Q9Y2D1 282 aaPredicted RBP11.83□□□□□ -0.52
PTCH1-214ENST00000547615 TTC21BQ7Z4L5 1316 aa11.83□□□□□ -0.52
PTCH1-214ENST00000547615 GPR162Q16538 588 aa11.82□□□□□ -0.52
PTCH1-214ENST00000547615 MON2Q7Z3U7 1717 aa11.82□□□□□ -0.52
PTCH1-214ENST00000547615 BTAF1O14981 1849 aa11.81□□□□□ -0.52
PTCH1-214ENST00000547615 COL24A1Q17RW2 1714 aa11.81□□□□□ -0.52
PTCH1-214ENST00000547615 IL2RBP14784 551 aa11.81□□□□□ -0.52
PTCH1-214ENST00000547615 AXIN2Q9Y2T1 843 aa11.81□□□□□ -0.52
PTCH1-214ENST00000547615 ERBB3P21860 1342 aa11.81□□□□□ -0.52
PTCH1-214ENST00000547615 KTN1Q86UP2 1357 aaKnown RBP11.8□□□□□ -0.52
PTCH1-214ENST00000547615 GRIN3BO60391 1043 aa11.8□□□□□ -0.52
PTCH1-214ENST00000547615 USP31Q70CQ4 1352 aa11.79□□□□□ -0.52
PTCH1-214ENST00000547615 SBNO2Q9Y2G9 1366 aa11.79□□□□□ -0.52
PTCH1-214ENST00000547615 LTN1O94822 1766 aa11.79□□□□□ -0.52
PTCH1-214ENST00000547615 NBPF1Q3BBV0 1214 aa11.79□□□□□ -0.52
PTCH1-214ENST00000547615 PDGFDQ9GZP0 370 aaPredicted RBP11.78□□□□□ -0.52
PTCH1-214ENST00000547615 IFFO2Q5TF58 517 aa11.77□□□□□ -0.53
PTCH1-214ENST00000547615 NLRP2Q9NX02 1062 aa11.77□□□□□ -0.53
PTCH1-214ENST00000547615 ROCK2O75116 1388 aaKnown RBP11.77□□□□□ -0.53
PTCH1-214ENST00000547615 PTF1AQ7RTS3 328 aa11.76□□□□□ -0.53
PTCH1-214ENST00000547615 HDGFL2Q7Z4V5 671 aaPredicted RBP11.75□□□□□ -0.53
PTCH1-214ENST00000547615 UTRNP46939 3433 aa11.75□□□□□ -0.53
PTCH1-214ENST00000547615 LY75O60449 1722 aa11.74□□□□□ -0.53
PTCH1-214ENST00000547615 SOX12O15370 315 aa11.74□□□□□ -0.53
PTCH1-214ENST00000547615 SLC24A1O60721 1099 aa11.74□□□□□ -0.53
PTCH1-214ENST00000547615 ACSBG1Q96GR2 724 aa11.74□□□□□ -0.53
PTCH1-214ENST00000547615 TFCP2L1Q9NZI6 479 aa11.74□□□□□ -0.53
PTCH1-214ENST00000547615 EDC4Q6P2E9 1401 aaKnown RBP11.74□□□□□ -0.53
PTCH1-214ENST00000547615 KLHL34Q8N239 644 aa11.73□□□□□ -0.53
PTCH1-214ENST00000547615 ANKRD36BQ8N2N9 1353 aa11.73□□□□□ -0.53
PTCH1-214ENST00000547615 ANKRD24Q8TF21 1146 aa11.73□□□□□ -0.53
PTCH1-214ENST00000547615 AKT1S1Q96B36 256 aa11.73□□□□□ -0.53
PTCH1-214ENST00000547615 SHANK3Q9BYB0 1731 aa11.72□□□□□ -0.53
PTCH1-214ENST00000547615 NSD3Q9BZ95 1437 aa11.72□□□□□ -0.53
PTCH1-214ENST00000547615 CGNL1Q0VF96 1302 aa11.72□□□□□ -0.53
PTCH1-214ENST00000547615 FLAD1Q8NFF5 587 aa11.72□□□□□ -0.53
PTCH1-214ENST00000547615 TERF2IPQ9NYB0 399 aa11.72□□□□□ -0.53
PTCH1-214ENST00000547615 KAT6BQ8WYB5 2073 aa11.72□□□□□ -0.53
PTCH1-214ENST00000547615 DOT1LQ8TEK3 1739 aa11.72□□□□□ -0.53
PTCH1-214ENST00000547615 PNPLA7Q6ZV29 1317 aa11.71□□□□□ -0.53
PTCH1-214ENST00000547615 ZNF827Q17R98 1081 aa11.71□□□□□ -0.53
PTCH1-214ENST00000547615 PELP1Q8IZL8 1130 aaKnown RBP11.71□□□□□ -0.53
PTCH1-214ENST00000547615 PUS7Q96PZ0 661 aaKnown RBP11.71□□□□□ -0.53
PTCH1-214ENST00000547615 SMG6Q86US8 1419 aaKnown RBP11.7□□□□□ -0.54
PTCH1-214ENST00000547615 USP47Q96K76 1375 aa11.7□□□□□ -0.54
PTCH1-214ENST00000547615 TUBGCP6Q96RT7 1819 aa11.7□□□□□ -0.54
PTCH1-214ENST00000547615 RTL1A6NKG5 1358 aa11.69□□□□□ -0.54
PTCH1-214ENST00000547615 LRRC4BQ9NT99 713 aa11.69□□□□□ -0.54
PTCH1-214ENST00000547615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.68□□□□□ -0.54
PTCH1-214ENST00000547615 IP6K1Q92551 441 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms